Zootoca vivipara (common lizard): 118075733
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Entry
118075733 CDS
T07275
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118075733 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
118075733 (RBM8A)
03015 mRNA surveillance pathway
118075733 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118075733 (RBM8A)
03041 Spliceosome [BR:
zvi03041
]
118075733 (RBM8A)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118075733 (RBM8A)
Spliceosome [BR:
zvi03041
]
Complex C
Other components
EJC/TREX
118075733 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
118075733
NCBI-ProteinID:
XP_034953823
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All DBs
Position
LG17:complement(25174860..25179916)
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARIREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggaccttcatgaggcgggcggcgaggacttcgccatggacgaggat
ggcgacgaaagcatccacaaactgaaggaaaaagcgaagaagaggaaaggcagagggttt
gggtcagaggagggttccagagcccgaatccgtgaggattacgacagcgtggagcaagat
ggggatgagccgggtccccagagatcggtggaaggctggattctcttcgtcacgggtgtc
cacgaggaggccaccgaagaggacatccatgacaagtttgcagagttcggtgaaatcaag
aacctccacctgaatcttgaccggcggacaggttacctgaagggctacaccctggtagaa
tatgaaacatacaaagaagcccaggcagccatggagggactgaatggacaagaccttatg
gggcagccgatcagcgtggattggtgttttgtcaggggacctccaaaagggaagcgaagg
ggtggccgtagaaggagcaggagtcctgacagaaggaggcgctaa
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