Zootoca vivipara (common lizard): 118075856
Help
Entry
118075856 CDS
T07275
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04120
Ubiquitin mediated proteolysis
zvi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118075856 (SYVN1)
04120 Ubiquitin mediated proteolysis
118075856 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118075856 (SYVN1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118075856 (SYVN1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118075856 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-ANAPC11
zf-RING-like
zf-RING_5
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
118075856
NCBI-ProteinID:
XP_034954093
LinkDB
All DBs
Position
LG17:28082531..28110915
Genome browser
AA seq
629 aa
AA seq
DB search
MFRTAIMMAASLALTSAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMLLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYILHSIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVM
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSQTPPEQQEGGQQPQQQHQ
TPLIPQPPNFPQGILPPFPPGMFPLWPPMGPFPPVPGVQPPNNADNASAATPSTSGTQTS
AGASRPSGDSASGSDTTAPAGTVPGFAFPPPWMGMPFPPLFGFPPMPVPPSGFAGLTEEE
LRAMEGHERQHLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGTPRTAQPPSAPAASAP
PSETPSPVPGTSEPAATTFQSADSTSSPAEETDAAGQADLSPAAAGAKGYTEPSGQEQDG
AQSSPEEPDTAELRRRRLQKLEFPPSSSH
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaacagccatcatgatggctgccagcctggccttgacctctgcagtggtggcg
cacgcctattatcttaagcaccagttctacccaacggtggtgtatctgacgaagtccagt
cccagcatggcggtgctgtacattcaagcttttgtcctggtgttcctattaggcaaattc
atgggcaaagtgtttttcggacagctccgagcagcggaaatggagcatctgcttgagcgg
tcatggtatgcagtgaccgagacctgccttgccttcacagtcttcagggatgacttcagc
ccccgttttgtggccctcttcactctcctcctcttcctcaagtgcttccactggttggct
gaggaccgtgtggactttatggagaggagcccaaacatttcctggctcttccattttcgc
attgtctctctgatgctgctcctgggcattctggatttcctgtttgtcagccatgcctac
cacagcatcctcacacggggagcctccgtccagctggtgtttggctttgagtatgctatc
ctcatgacgatggtgctcaccatcttcatcaaatacatcctgcactccatcgacctccag
agcgagaacccttgggacaacaaggccgtctacatgctctacacagagctcttcacagga
ttcatcaaggtcctcttgtacatggccttcatgaccatcatgatcaaagtgcacaccttc
ccactgtttgccatccgacccatgtacctggctatgaggcagttcaagaaagctgtgaca
gatgcaatcatgtcccgccgagctattcgcaacatgaacaccctgtaccccgacgccact
ccagaagaactgcaggccatggacaatgtgtgcattatctgccgggaggagatggtaatg
ggtgcaaaacgcctgccttgcaaccacatattccacaccagctgcctgcggtcctggttc
cagcgccagcagacctgtcccacgtgccggatggacgtcctccgagcctccctccccact
cagtcgcagaccccccctgagcaacaggagggagggcagcaaccgcagcagcagcatcag
actccactgattcctcagccgccaaactttccccaaggcatcctgccccctttcccccca
gggatgttcccgctatggccgcccatgggccccttccctccagtgcctggcgtccagcca
cccaacaatgcagacaacgcttcagcagccactccctccacctcaggaacacaaacatca
gcaggcgcctcgaggcccagtggcgattcagcatccggatcagacaccacagcccctgca
gggacagtgcctggtttcgccttccctccgccttggatggggatgccgttcccacctctc
tttggtttccctccgatgccagttccaccatctgggtttgctgggctgacagaggaagag
ctgcgggccatggaaggccatgagcggcagcatttggaagcccgtctccagtgcctgcag
aacatccacacactccttgacgctgccatgctgcagatcaaccagtatctcactgtgttg
gcaacgatcgggacgccccgtactgcacagccaccaagtgccccagctgcttcagcaccc
ccttcggagacccccagtcctgtacctggaacaagtgaacccgctgccaccactttccag
tctgcagacagcacctcttcaccagcagaagagacagacgcggcaggtcaagcagatctg
tccccagcagcagccggtgccaagggctacacagagccatctggccaggagcaggatgga
gctcaatcttccccagaggaaccagacactgcagagctgcgcaggcgccgacttcaaaaa
ctggaatttcctccttcctcctcccattga
DBGET
integrated database retrieval system
