Zootoca vivipara (common lizard): 118075898
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Entry
118075898 CDS
T07275
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118075898
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118075898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
DUF416
Motif
Other DBs
NCBI-GeneID:
118075898
NCBI-ProteinID:
XP_034954168
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All DBs
Position
LG17:26901510..26911808
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AA seq
713 aa
AA seq
DB search
MAAEGPEAPASPGGEGLPGAEAGPDQDVLPKPASNGAPNPDEATPAQECNGVSVESTALA
LRPEPAKEEALQPSAPDVVMHMAINPPMEELSITYPLEFERYWRAAQENPLDFTAWTELL
QYVEQENHIYAARKAFDSFFLRYPYCYGYWKKYADMERRFDFIKETEEVFQRGLQSIPLS
MDLWIHYISFLQSSLDMNLPDSAQKICGTFESAVAAAGVDFRSDKLWEMYVEWQREQGDL
KAITAIYDRVLATPTQLYSHHWEKFKEHVTSHPPREILSTEELLWLQSKMASETVAKATE
MEAEEAPPGEDVPLKTEAKQEMVEGSQVLGPLDQDRIRELVISIRQHIYTQNESEVSKRW
NFEEGIKRPYFHVKPLERAQLRNWRDYLDFEIASGSHERTIVLFERCVIACALYEEFWIK
YTRYLENHSVAGARNVFQRACCYHLPRKPNIHLLWAAFEEKQGEVEEARRILKSFEDCVP
GLAMVRLRRVSLERRLGNMEAAETLLMEAIRENEGMPVSSFYSVKLARQVLKVQKNLIKA
RKILLEALEKDPDNAKLYANLLEMEFSADVRQNEGNTMSSFDRALTSGLPLETKIIFSQR
RVEFLEDFGSSINSLLTSYDEHQKLLNQQVMRKRLLENGAEEGDEKRMRLEDAAAAAGGG
SLAVATTGITPLMAADVSNSSTTGAYNYNTWYQNYSGYGYQNTWNYNQYYQQT
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaagggcccgaggctcccgccagtcccggcggggaggggctcccgggggcc
gaggctggccctgaccaagatgtgcttcctaagccagcgagtaacggagccccaaaccca
gatgaggcaacgccagcgcaagagtgcaacggagtcagcgtagaatccactgctctggcc
ctgcgacctgagcctgccaaggaggaagcccttcagccctctgctcccgacgtggtcatg
cacatggcaatcaacccgcccatggaggagctctccatcacatatccgctagagtttgag
cggtactggagagcggcacaagagaaccctctcgacttcactgcatggactgagctgctg
cagtatgtagagcaagagaatcacatctatgcagcccgcaaagcctttgacagcttcttc
ctgcggtacccttattgctacggctactggaagaaatatgcagacatggagcggcgcttt
gacttcatcaaggagaccgaggaggttttccagcgaggcctgcagtccattcccctcagc
atggacctgtggatccattacatctcatttctgcagtccagcttggatatgaaccttcca
gattcagctcagaaaatctgcggcacctttgagtcggccgtggcagccgcaggggtggat
ttccgttcggacaaactttgggagatgtacgtggagtggcagagggagcaaggggacctg
aaggccatcaccgctatctatgaccgagtgctggccacccccacccagctgtacagccat
cactgggaaaagttcaaggagcacgtgaccagccatccccccagagagattctctccaca
gaggagctgctgtggctgcagtcgaagatggcctccgagacagtggccaaggccaccgag
atggaggccgaggaggctccgcctggagaggacgtcccactgaagacagaagccaagcag
gagatggtggaagggagccaagtgctgggacctctggaccaggacaggatccgggagctc
gtgatatctattcgccagcatatctacacccagaatgagagcgaagtcagcaagcgctgg
aattttgaagaggggatcaagagaccctacttccatgtaaagccgctggagagagcccag
ctgcggaactggcgggactacctggactttgagattgccagcggctcgcacgagcgcacc
attgtgctctttgagcgctgcgtcattgcctgcgccctgtacgaggagttctggatcaag
tacacaaggtacctcgagaaccacagtgtagctggggccaggaacgtcttccagcgagct
tgctgctatcacctccctcggaagcccaacatccacctcctctgggcagcctttgaggag
aaacaaggagaggtggaggaagcccggcgcatcttgaagtcttttgaggactgtgtgcct
gggctggccatggtgcgtctgcggcgagtgagcctggagcgccggctgggaaacatggaa
gcggcggagaccctcctgatggaagccatccgggagaacgaggggatgcctgtctcttcc
ttctattctgtcaaactagcccggcaggttctgaaagtgcagaagaacctgatcaaagcc
cggaagatactcttggaggcactggagaaggatccggataatgccaagctctacgccaat
ctgttagaaatggagttcagtgctgacgtccggcaaaatgagggcaacaccatgagtagc
ttcgaccgagccctaaccagcggtctccccctggagaccaagattatattctctcagcgg
agggtggagtttcttgaggactttgggtccagcatcaacagcttactgacatcgtacgat
gagcatcagaaactcctgaaccagcaagtgatgaggaagaggctcctggagaatggtgct
gaggagggcgatgaaaaaaggatgagacttgaggatgctgctgcagctgcaggaggtggc
agccttgcagttgcaacaacgggcatcacccctttgatggcagcagatgtgagcaacagc
agcacaacaggagcttataactataacacttggtaccagaactatagtggctatgggtac
cagaacacatggaactacaatcagtattaccaacagacctga
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