Zootoca vivipara (common lizard): 118076020
Help
Entry
118076020 CDS
T07275
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zvi03009
]
118076020 (DDX54)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118076020 (DDX54)
Ribosome biogenesis [BR:
zvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
118076020 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
118076020
NCBI-ProteinID:
XP_034954396
LinkDB
All DBs
Position
LG17:complement(19850178..19874394)
Genome browser
AA seq
837 aa
AA seq
DB search
MAPAQATGRRRKRQRRCKDRDLDEQQDYEMPVPAFPASDCTSDVELDTQEMVRAQNKKKK
KSGGFQSMGLGYPVFKGIMKKGYKIPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLIP
MFEKLKLHSAKTGARALILSPTRELALQTLKFTKELGRYTGLKTALILGGDKMEDQFAAL
HENPDIIIATPGRLMHVAMEMKLKLQSVEYVVFDEADRLFEMGFAEQLQEIISRLPENRQ
TVLFSATLPKLLVEFARAGLTEPVLIRLDVESKLSEQLKLSFYHVRADDKPALLLYLLRT
VVRPQDQTIVFVATKHHTEYLKELLTAQGVNCTHVYSSLDQTARKINVGKFIHGKCSVLI
VTDLAARGIDIPLLDNVVNYSFPAKAKLFLHRVGRVARAGRSGTAYSLVAPDETPYVFDL
HLFLGRPLVLANPHEKPTDTDGIFGRVPQSIIDDEESLLQTDHERSLELQSLRRVSDNAQ
KQYLKSRPAPSPESIKRVKEMDFSLLGIHPLFSLRFEGEEMERLKFVDSIKSYRSKATIF
EINATNKTLACDVMRAKRNRDRQLIDRHQRKQQERLSLAAEKVQRLAAPATTEQDPEEEE
EHIQDVFSSVVGRKRKQPLDGKENGKKQRLAMQQEGEFYIPYRPKDFESERGLCIGGEGT
AFEQQASGAVLDLMGDENRNMSNSKQLLKWDRKRKRFVGQTGQENKKKIRTESGAYINSS
YKGNLYDKWKKKNKIDDQDSDSDPEGERRAGKKRKGRGAHPAPSSHGSRGPQQGKVRSEL
KTKQQILRQRKKAAKHRFLQSGSLKRLKSRNRQRVQEMRRTAFGRGAAKKGKMRKRM
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgcccaggccacggggcggcggaggaaaaggcagcggcggtgcaaggatcgg
gacctggacgagcagcaggactatgagatgccggttccagcttttccggcatcggattgc
acttctgatgtcgagctagacacccaggaaatggttcgggcccagaacaagaaaaagaag
aaatcagggggctttcagtccatgggtctgggctaccctgtgttcaaaggaatcatgaag
aaagggtacaaaataccgactcccatccagaggaagaccatccccgtgatcctggacggc
aaggatgtggtggcgatggcgaggacgggcagcggaaagacggcctgtttcctcattccc
atgtttgagaagctgaagctgcacagtgccaagactggcgcacgggctcttatcctctct
ccgaccagagaacttgccttgcagaccctcaagtttaccaaggagcttggccgatacaca
ggcctgaaaacagccctgatccttggaggagacaagatggaagaccagtttgcagctctg
catgaaaaccctgatataattattgcaactcctggccgactgatgcatgtggccatggag
atgaagctcaagctgcagagtgtggaatatgtggtctttgacgaagcagacaggctcttt
gagatgggctttgcagagcagctgcaggagatcatctcgaggctgcccgagaaccgccag
accgttctcttctctgccaccctgccaaaacttctcgtggagtttgctcgagccggtctt
acagagcctgtgttgatccgattggatgtggaatccaagctgagcgagcagctcaagctt
tctttctatcacgtgcgtgctgatgacaagccagccctcctgttgtacttgctgaggacg
gtcgtaagaccgcaggaccagacgattgtctttgtggccacgaaacatcatacagaatac
ctgaaagagctgttgacagcccagggtgtgaactgcacgcatgtctacagctccctggac
cagacagcgcggaagatcaatgtgggcaagtttatccacggcaaatgctcggtgctgatc
gtcaccgacttggctgcccggggcatcgacatccctctcctggacaatgtggtcaactac
agcttcccagccaaggccaagctcttcctgcaccgtgtcggcagagtggcccgagcgggg
agaagtggtacagcttactccctggtagcgccggatgagaccccctatgtttttgacttg
cacctcttcctaggccggcccctcgtccttgccaaccctcacgagaagcctacagacaca
gacggcatctttggccgtgtcccccagagcatcatcgacgatgaagagagcctgcttcag
acagaccatgagcgctcgctggaactgcagagcctccggcgagtctctgacaatgcccag
aagcagtacctgaagtcgcggcctgctccgtcgcccgagtccatcaagagggtcaaggaa
atggacttcagcctgctgggcatccaccccttgttcagtcttcgctttgagggggaagag
atggagcggctgaaattcgtggacagcatcaaaagttaccgttccaaggcgaccatcttc
gaaatcaacgccaccaacaagactctggcctgcgacgtcatgcgggccaaacgtaaccgg
gaccgccagctcattgaccggcaccagcggaagcagcaggagaggctctccttggcggcg
gagaaggttcaacgtcttgctgcgccggcgaccacagagcaagacccagaggaagaggag
gaacacattcaggatgttttctccagcgtggtgggaaggaagcggaagcagcccctggat
ggaaaggagaacgggaagaagcagaggctggcgatgcagcaggaaggagagttctacatc
ccataccggccgaaggactttgagagcgaacgagggttgtgcatcggtggggaaggcacg
gcgttcgagcaacaggcttccggagccgtcctcgacctgatgggtgacgagaatcggaac
atgagcaacagcaagcagctcttgaaatgggatcggaaaaggaagaggtttgtggggcag
acgggccaggagaataagaagaagatccgaacggaaagtggggcctacatcaacagctcc
tacaaaggcaacctctacgacaaatggaaaaagaagaacaagatagacgatcaggattcg
gactcagatccggaaggagagcgcagagccgggaagaagcggaaaggcaggggtgcccac
cctgccccgtcttcccacggcagccgcggcccccagcaggggaaggtccgctcagagctg
aaaaccaagcagcagatcttgaggcaacggaagaaggcagccaaacatcgcttcctgcag
agcggcagcttgaagcgcctgaagtcacgcaaccggcagcgggtgcaagagatgcgccgg
acagcctttgggcgcggggcagccaagaagggcaagatgcggaagaggatgtag
DBGET
integrated database retrieval system
