Zootoca vivipara (common lizard): 118076077
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Entry
118076077 CDS
T07275
Symbol
TOP3B
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
zvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118076077 (TOP3B)
03460 Fanconi anemia pathway
118076077 (TOP3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zvi03032
]
118076077 (TOP3B)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118076077 (TOP3B)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
118076077 (TOP3B)
DNA replication proteins [BR:
zvi03032
]
Eukaryotic type
DNA Topoisomerases
118076077 (TOP3B)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
118076077 (TOP3B)
FA (Fanconi anemia) pathway
118076077 (TOP3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
118076077
NCBI-ProteinID:
XP_034954498
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Position
LG17:complement(12466374..12491658)
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AA seq
862 aa
AA seq
DB search
MKTVLMVAEKPSLAQSIAKILSRGNMTSRKGLNGACSVHEYTGSFIGQSARFKMTSVCGH
VMTLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLNMVKFLQVEGRGCDCIVLWLDCDK
EGENICFEVLDATVPVMNKPRGSERTVYRAKFSSITDTDICNAMNNLGEPNHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPENY
WVLQAKVSHEKDCCLTLEWDRVRVFDREIAQMFLNITKVAKEAKIESVSKKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANN
PYWAETVKALLSEGINKPRKGHDAGDHPPITPMRTATEAELGGDGWRLYEYITRHFIATV
SADCKYLQTTIACSIGPERFTCIGKTVISPGFTEIMPWQSIPPEESLPSCERGTVFPISE
VKLLEKQTNPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKANYHQVLEHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGVIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNNPPFRDMKKGMGCNECTHPTCQHSLNM
LGIGQCVECENGVLVLDPTSGPKWKMACNKCNVVVHFFENAHKVRVSAETCESCDAALVD
VDFNKAKSPLPGNETQHSGCVFCDPVFQDLVELKHATMKHPMHRGGQGKRQGRGRGKGRR
PGGRLNAKKPKDKMAALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggttcttatggtagcagagaagccttctctggctcagtccatagccaaaatc
ctttcaagaggaaatatgacctctcgcaaagggctgaatggggcgtgttcagtgcatgaa
tacaccggatcattcataggacaaagtgcccgtttcaagatgacatctgtctgtggccat
gtgatgacactggattttataggaaagtacaacaactgggataaagtggacccggctgaa
cttttcagtaaggccccgacagaaaagaaagaagcgaaccccaaactgaacatggtgaaa
ttcttacaggtggaagggagaggttgtgactgtattgttctgtggttggattgtgacaag
gaaggtgaaaacatctgctttgaggtcctggatgctactgttcctgtgatgaataaacct
cgtggcagcgaaaggaccgtatacagagccaagttcagttctattacggacacagacatt
tgcaatgccatgaacaacttaggggagcctaaccacaatgaggctttgtctgtagatgcc
cgccaggagctggatctgagaattggctgtgcatttacaaggtttcagacaaaatacttc
cagggtaaatacggcaatttagacagctcactaatctccttcggaccctgtcaaacgcca
actctagggttttgtgtggagcgacatgataaaatccagtctttcaagcctgagaattac
tgggtgttgcaagccaaggttagccatgaaaaagactgctgtctgacactcgagtgggac
agagtgagggtgtttgacagggaaattgctcagatgttcctaaacataacgaaggttgcg
aaagaagcgaagatcgaatctgtgagtaagaaggagaaggctaagcagagacctctggca
ctgaatactgtagagatgttaagagttgccagttctgcattgggaatgggaccgcagcat
gccatgcaaatagcagaacggctttatacacaaggctatatcagttatcctcgaacagaa
actacccactatccagagaactttgatctgaagggctctttgaggcagcaggctaataat
ccttactgggctgaaacagtaaaagcgttactgtcagaaggtattaacaaaccaaggaaa
ggtcatgatgcaggtgaccatcccccaataacaccgatgagaactgccacagaagcagaa
ctaggtggtgatggatggagattatatgaatacattactaggcatttcattgccactgtc
agtgctgactgcaaatacctccaaaccaccattgcttgcagcattggtcctgaacgtttt
acctgtataggaaagactgttatttcaccaggtttcactgagattatgccctggcagagc
attccgccagaagagagtctccccagctgtgagagaggcacagtctttcctatcagtgaa
gttaaactgctggagaagcaaaccaatcctcctgactacctgactgaagcagagctcatt
actctgatggaaaaacatggcattggaacggacgccagcattcctgtgcatatcaacaac
atctgccagcgcaactatgtgacggtagagagcggccgcagactgaaacctacaaacctg
ggcattgttctcgtgcacggctactataaaatagatgcagagctcgttcttcccacaatc
cgcagtgctgtagagaaacagctcaaccttatcgcccaaggtaaagccaattatcaccag
gtcctagagcacaccctggatatcttcaaaaggaagtttcactactttgttgattcaatt
gccggcatggatgagttgatggaagtgtccttctcaccgcttgctgccacaggcaagccc
ctttcccgctgtggaaaatgccatcgttttatgaagtatattcaggcgaagccgagccgt
ctgcattgctctcactgcgacgagacctacagccttccccagaatggtgtcatcaaactc
tacaaagagttgcgatgcccactggatgactttgaactggtgctgtggtcctctgggtca
agagggaagagctacccactgtgtccttactgttacaacaatccccctttcagggacatg
aaaaaaggaatgggctgtaatgagtgcacccaccccacatgccaacactcgttgaacatg
cttggaatcgggcagtgcgtggagtgtgagaacggggtcctggtgcttgacccaacctct
gggcccaagtggaagatggcctgcaacaaatgcaacgtggtcgtgcacttctttgaaaac
gcccacaaggtgcgggtgtcggccgagacctgcgagtcatgcgatgccgccctggtggac
gtggatttcaataaagccaagtcccccctccctggcaatgagacgcagcactctggctgc
gtattctgcgaccccgtcttccaagacctggttgaactgaagcatgcgacgatgaagcac
cctatgcatcgcggagggcaggggaaaaggcagggccggggaagaggaaaaggcaggagg
cctggagggaggctgaatgcaaagaaacccaaagacaagatggccgccctggctgcttat
tttgtataa
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