Zootoca vivipara (common lizard): 118076094
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Entry
118076094 CDS
T07275
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118076094
09123 Folding, sorting and degradation
03018 RNA degradation
118076094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118076094
03041 Spliceosome [BR:
zvi03041
]
118076094
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118076094
mRNA degradation factors
5'-3' decay
Lsm complex
118076094
Spliceosome [BR:
zvi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118076094
Complex C
U2 snRNP components
118076094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
118076094
NCBI-ProteinID:
XP_034954534
LinkDB
All DBs
Position
LG2:103493166..103495226
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcattcttcaagtccctggtagggaaggacgtggtggttgaactgaag
aatgatttgagtatatgtgggaccttgcattccgtggatcagtatctgaatatcaagctc
acagacatcagtgtgaccgacccagagaaataccctcacatgttgtccgtcaagaactgc
ttcatccgcggctcggtcgtccgctacgtccagcttccagccgacgaggtcgacacgcag
ctgttgcaggatgccgcccgcaaggaagctctgcagcagaagcagtga
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