Zootoca vivipara (common lizard): 118076912
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Entry
118076912 CDS
T07275
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03022
Basal transcription factors
zvi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118076912
09124 Replication and repair
03420 Nucleotide excision repair
118076912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118076912
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118076912
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118076912
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118076912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Pyocin_S
ORC3_N
Motif
Other DBs
NCBI-GeneID:
118076912
NCBI-ProteinID:
XP_034955994
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All DBs
Position
LG18:30939523..30956282
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERAKRWEGGYERTWEVLKEDESGSLKASIEDILYKAKRKRIFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPTRLTCTLKLLEYFVEEYFDQNPISQVGIIVTKGKRAEKLTEL
SGNPRKHTAALKKAVDMSCLGEPSLYNALNLAAQTLKHMPGHTSREVLVIFSSLTTCDPS
NIYDLIKSLKALKIRVSIIGLSAEVRVCTVLARETGGTYHVILDESHYRELLMHHVSPPP
ASSSSESSLIRMGFPQHTIASLTDQDAKPSFSMVQLENSNDPGLTLGGYFCPQCRAKYCE
LPVECKVCGLTLVSAPHLARSYHHLFPLDAFQEVPLEQYIGERYCQGCQGEITDQHVYIC
KVCQCAFCVECDIFAHDTLHCCPGCIHKHPAPPRV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaccagagagagccaaacggtgggaagggggatatgaaagaacttgggaa
gttcttaaagaagatgaatctggatcattgaaagccagcatagaggatattctttataag
gccaaaagaaaaagaatctttgagcatcatggacaagttcgacttgggatgatgcgtcac
ctgtatgtagtggttgatggatcaagaacaatggaagaccaagatttaaaacctaccagg
ctaacttgtaccctaaagttactggaatattttgttgaagaatattttgaccaaaatccg
attagtcaggttggcattattgtgactaagggcaaaagagctgaaaaacttaccgagctt
tcagggaatccaagaaaacacacagctgctttgaaaaaagctgtagatatgtcttgtcta
ggagagccatctttatataatgccttaaatttggccgcacaaacattaaagcatatgcca
gggcatacaagcagagaagtcttagtaatattcagcagtctgacaacatgtgatccttcc
aatatttatgatctaattaagagtttaaaggcacttaagatcagagtgtctattattggc
ctttcagctgaagttcgagtttgcactgtacttgcccgggaaactggtggaacctatcat
gtcattttagatgaaagccattatagggaacttctgatgcaccacgtcagtccaccacca
gctagttcaagttctgaaagctcacttattcgtatgggctttcctcagcacaccattgca
tctttgactgatcaggacgcaaagccatcttttagcatggtgcagctagaaaacagcaat
gatccaggtcttaccctgggaggatatttctgcccccaatgtagagccaaatactgtgag
cttcctgtggagtgcaaagtttgtggtcttacgctagtatctgcaccccatctggctcga
tcttaccatcacctttttcctttggatgcctttcaggaagtcccactggaacagtatata
ggagaacgctattgccaaggatgccaaggagaaattacagatcagcatgtctatatatgt
aaagtctgccagtgtgcgttttgtgtagaatgtgatatttttgctcatgatactctgcac
tgctgtccgggttgcattcacaagcatcctgcccctccccgtgtgtga
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