Zootoca vivipara (common lizard): 118077033
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Entry
118077033 CDS
T07275
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118077033 (VPS13A)
Membrane trafficking [BR:
zvi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
118077033 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
118077033
NCBI-ProteinID:
XP_034956213
LinkDB
All DBs
Position
LG18:2020879..2179729
Genome browser
AA seq
3190 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDCSQLSLGIWGGAVALKNLEIKENALYQFDVPFKVKAG
HIGQLNLQIPWKNLYTQPVEAVLDEVFLLIVPTASIKYDAEKELKQQLEAKQRELQRIED
AKQKIADIEKTEEKQDTFIEKLITQVIKNLQLKISNIHIRYEDDITNKGIPLSFGVSLQN
LSLQTSDQNWNPCIQDASTKLFYKLLRLDNFFAYWNVKSEMFYQGGFKESLSNLKNGVAS
TNMIPEGYSFVFRPISAKAKLRMNPRSDVDFSAPKLDLDVNLQDIAIELNKPQYFSIMEL
LESIDMMTRNLPYRKYRPDVPVHNNVKKWWKYSILGILEVNVQPKLQMWSWEHIRYHRNK
VKSYRDLYKTKITSKKPAEECLNMLEQLEKTLDIFNITLARQQAEFEATKAGLKIFKAGA
KQDDEDSGGWFSWMWGWTGGKGKESTQEPKGIEQLMTPQEKNKLYAAIGYSETAVDPTLP
KTYEAIKLYVKLLSMTVSIRENNQKPELLKVALIDLRTAVTQRPGAEAIRFESSVSAFEV
EGMAQEKTVPCLLSSHTVHSEHNASLFTIMFETNPLDETANQKLRIESQPLEIKYDAMTV
NSIVDFFRPPSDVHLEQLTSATLTKLEEFREKTATGLVYIIETQKVLDLRINLMASYIIV
PQGGFYEPTSNKLLLDLGNLKMTSKSRSEIIKIGENTLEDIMSRAYDKFDIQLSSIQLLY
SRHDENWEEARNLRSSSQHIIQPLDVKMELSRAMVVTDARMPKYKMFGELPLLSFNISDE
KLKSILDLIDSIPLPEAPETTVTTQPSKLQVSPVMTTPQMSTSVLPFLESLSVAGSSESE
EEYFDAPSSPVEDWSFFEASLGSSSRPGSLKKKAVRRESLKNMIDFQLRFEIPEVFFQVS
RLTGGIEKPILRLEIYSLGTELKLRTYDMAATAFLKEICLMCPEYMDDKNKPVYLISTLD
NLVDDLLAIEYVKADINAPELKTTYKNVVQLIKVTFSSIDIHLHTEALMSTMNFLNNLLP
KQETSSVEIVQEKEEKKEVLKKFTSKKSRCEDVCDLHVCADMSCLRIFIREQKNWISEIR
IEGLDSEVMMKKETTEVSANLKNIVILDCDEAALHKKALYITGKEVFSFKMVTYMYATYD
ISYADMEAVDSQVYLTVGCIQIVFVNKFVSAILAFVNNFQTAKEAITEATVQAAEKAATG
VKELAQQSSRMALDINIKAPVVIIPQSAVSTDVIVADFGLITIKNEFLLIKTSLRYSVPP
ILDCIHVKLSDLKLYRSSCISGLLQNEIQLLQPLNLEVGVERNLAALWYHEIPDIKILGR
LKPMNLILSQDDITTILRTLNENLGDSSGPPPPVPEKKDVLSIHSGTASVSQHSGAGIRI
VTSAVVEARSSVKTKTVLKLDFRIDSLTLVLYSPNSSQQPTNQSERDGHLKLAEFKLLLI
SAAVKMVSDGSMNASVKLTNCTLDDKRQTVQNATPRMVEMKCESEKKVMMDISYKQARDG
NTVLDTVVNETYVCASIEFLLTVADVFLNATAESAAAQKNFKQTLAVKEQVSVQPVSTME
IHVVIKNPEIVFVADLTRSDAPALVATAQCEVSMKYGPEMYKMTAAVKDIMVKACPFLPD
MRKGSITTILQPCDLFFDMIQSGEDPQKADLSIKSITIKVTPIILNTVTTITSALFPTNE
TTEKDISPVPPDIWDQKNIKNLKMWFLEESSENKDPASVIELVPTGETMKMKIETVVITL
EAGVGHKTVPMLLAKSSFSGEVRNWSSLINLSSRLELEVHYYNEMFGVWEPLLEPLEVEN
TDEFRPWVLELKMKKKAKKALVESVAEEENYKVPEYKTVITIFSQDQLNITLSKCGLLML
SNLGTAFAEAASETSEISKKDRAPFVLMNSLGVPAIVLPSDSFNVLNVESKGDSFHLEDG
QSLSMEYVRTKSDQDQFTAMTTLSSRVFYIWITPQNHSTTEKIPLTKVGRSLYRVRHNDS
GVVRSVVCQIDTTEGSKMITVHSPIQIKNHFSIPLKIFEDGKCLGMALPEDEFNIPLTSY
RALLFFRPVADEGGTSGEYTSSEGVSFDEMVKNFGKVLQKKCQPTKSPNHPLIINIVPMQ
DTLISSVCIDDQWDLPYVVHLWPSVLLRNLLPYQIAYSLEGQSTTCNTLENGCSTQIHNA
VLDQSKLQLHLLNYLGKNWTAEYHTRMNQQEISFVTFSCITDVDKAELDIAVHITYATGQ
VIIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDYKMPLLFSFQPKHFYKNNKVQLMVTDS
ELSDHFSLDTVGSHGFVRCKGNKNEYQVGVTIHNSSFNITRIVTFTPFFMITNRSMHTLE
VAEEDNEKWIPIISQQCTPFWPEKNESKLRVRVEHSDIPPKIIRFDKQENCLLLHLDNRL
GGIIVDVTPAEHSTAITFSNYHDGAAPFLIINHTKEEMVEYGQSSHNAMEDVLSPNKAVL
YTWADPVGSRALKWKCGKSSGEVTQKDDLMTPIQVGSKTIYLVSFFEGLQRIILFTQDEK
VFKLTYESEKAELAEQEIIISLQDVGISLVNNYLKQEVGYIGITSSDIIWETKPKKKSRW
RPLSLKQTEMLEKEFNDYCEHSPTENKIVELDDNTPVCLTPTGNNMKMLQPNEIPVRRSF
LPALKVQYSTSEHQSSFRVQIYRIQIQNQIPGAIFPFVFYPIKPPKSISLDSEPKPFTDV
SIVMRTAGHSQISRIKYFKVLIQEMDLRLDLGFLYALADFFTLADEVPKEQEIELFKKDV
ESVHEELKNISSTDTSQISLYEYFHISPIKLHLSFSLSTPPEDSNKGETRKELIPVQSLN
LLLKSIGATLTDVQDVVLKLAFFELNYHFCTTEQLQWAVVMHYSKQAIKQMYVLILGLDV
LGNPFGFIRDLSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASRIT
GAMAKGVAAITMDEDYQQKRREAMNKQPTGLKEGITRGGKGLVSGFVSGITGIVTKPIRG
AQKEGATGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKRATNASEDVMSLRPPRFFGE
DGVIRPYRLRDGAGSQMLQNIENGRFAKLRYFTHAMVNSTDLLMVTKSGILFVTRGTFGQ
LTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKTPDDAKWVLSKL
EEVRENHPKL
NT seq
9573 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgttctgaaccgcttcctgggcgactatgtggtg
aacctggactgctcccaactctcgctcggcatctggggaggagctgtagcacttaagaat
cttgaaattaaagaaaatgcactgtatcagtttgatgtaccatttaaagttaaggcaggg
catatcggtcaactgaatttgcaaattccatggaaaaatctttatactcaaccagttgaa
gctgttttagatgaagttttcttacttattgtgcctacagccagtattaaatatgatgca
gaaaaagaactaaagcaacaactagaagcaaagcagagagaacttcaaagaatagaagat
gcaaagcaaaagattgctgacatagaaaaaacagaagagaagcaagacactttcatagaa
aagctaattactcaggtcatcaaaaatcttcagctgaaaatttctaacatccatattcgc
tatgaggatgatattacaaataaaggtattccgttgtcatttggtgtctcacttcaaaat
cttagtttacagacttcagatcaaaactggaatccatgtatacaggatgcatctactaaa
ttgttttataagcttcttcgattggacaacttttttgcatattggaatgtgaagtctgaa
atgttttatcagggtggttttaaagaatctttgagtaacttaaaaaatggagttgcgagc
actaacatgattccagaaggctacagttttgtattccgtccaatatcagctaaagccaag
ctccgtatgaatccacgatctgatgttgacttttctgcaccaaaactagatctagatgtg
aatcttcaggatatagccattgaacttaataaaccacagtatttcagtattatggagctc
cttgaatcaattgatatgatgactcgaaatttaccatacaggaaatataggccagatgtt
cctgttcacaacaatgtcaagaaatggtggaagtacagtatacttggcattcttgaagta
aatgtccaaccgaagttacaaatgtggtcttgggaacatattcgttaccataggaataaa
gtgaagagctatagagatctgtacaaaacaaaaataacatcaaagaagcctgctgaggaa
tgtttgaacatgctggaacaactagagaagaccttggacatattcaacatcactctggca
agacaacaggcagaatttgaggcaactaaggctggattaaagattttcaaagcaggggct
aaacaagatgatgaagactctggtggctggttcagttggatgtggggttggactggagga
aaaggcaaggaatccacacaagaacccaaaggcattgaacagcttatgaccccacaagaa
aagaataaattatatgcagcaatcggctatagtgaaacagctgttgatccaacattgccc
aaaacgtatgaagccatcaaactttatgtaaaactgttaagcatgactgtgtcaataagg
gaaaacaatcagaaacctgagctgctaaaagttgcactgatagatctgcgtacagcagta
actcaacgacctggtgctgaagcaataagatttgaatctagtgtaagtgcatttgaagtt
gaaggcatggctcaggaaaaaacagtaccctgcttactgtcatctcacacagtccattca
gagcacaatgcatcactcttcaccattatgtttgagaccaatcccttagatgagactgcc
aatcaaaaactaagaatagagtcacagcctttggaaataaaatatgatgcaatgactgtg
aacagcatagtagatttctttcgacctccaagtgatgttcatttagagcaactaacatca
gcaactttaacaaagctagaagaatttcgtgaaaagacagcaacaggcttagtgtatatt
atagaaacacagaaggttctagatttaagaataaatcttatggcttcttatatcattgta
ccacaaggtggattctatgaaccaacatcaaataagttacttttggatcttggtaactta
aagatgacaagtaaaagtcggtctgagattatcaaaattggtgaaaacactcttgaagat
attatgtcaagagcatatgataagtttgacattcagctcagcagcatacaacttctttat
agcagacatgatgaaaactgggaggaagctcgaaacttacgatcctcatctcagcatatc
atacagcctctggatgtgaaaatggaactgagcagagcaatggttgtaacagatgcaaga
atgcccaagtacaaaatgtttggtgaactgccattactgtctttcaatatctcagatgag
aaattgaaaagtattctggatcttattgatagtattcctttaccagaagctcctgaaact
actgttactacacaaccttccaagcttcaggtatcaccagtgatgacaacaccacaaatg
tcaacctctgtacttccatttctagaatctctttcagtagctggatcaagtgaatctgaa
gaagaatattttgatgccccaagcagtcctgtagaagactggtcattctttgaagcttct
ttggggtcctcaagtaggcctggcagcttaaagaaaaaggcagtgagacgggaatcattg
aagaatatgatagatttccaactaagatttgaaatacctgaggtgttctttcaagtgtct
cgtcttactggaggtattgaaaagccaattctgcgtttggagatttatagtttaggcact
gagcttaagctaagaacatatgatatggcagccaccgcttttcttaaagagatttgctta
atgtgtccagaatacatggatgataaaaataagccagtttacctcatttcaacactggat
aatttagttgatgatcttctagccattgaatatgtaaaggcagatattaatgccccagag
ctgaaaactacttataagaatgtggtacagctaataaaggttactttttcttctatagat
atccatttacacacagaagcacttatgagtaccatgaatttcctaaataatcttcttccg
aaacaagagacaagttcagtagagatcgtccaggaaaaagaagagaagaaggaagttctt
aagaaatttacttcaaaaaagtcaaggtgtgaagatgtttgtgatctccatgtttgtgca
gacatgtcctgtttacgcatttttataagagaacaaaaaaactggatatctgaaatccgc
attgaaggtcttgatagtgaggtgatgatgaagaaagaaacaactgaagtatcagcgaac
ttaaagaatatcgttattttggattgtgatgaggcagcactgcataaaaaggctctgtat
attacaggcaaagaggtcttcagtttcaaaatggtgacgtacatgtatgctacatatgac
atttcgtatgctgatatggaagctgttgacagccaggtttacttaactgttggatgcatt
cagattgtttttgtcaacaaatttgtctctgctattttggcttttgtaaacaattttcag
acagcaaaggaagcaattactgaagccactgttcaagctgctgagaaagcagctactggt
gtaaaggaattggctcaacaaagttccagaatggcactggacattaatattaaagcaccc
gttgtcataattccacagtcggcagtatctactgatgttatcgttgctgattttgggttg
atcaccataaagaatgaattccttctcattaaaacgtcactacgatatagtgtcccacct
attcttgattgtatacatgtgaaactgagtgatctaaagttgtacagatcaagttgtata
agtggtttattgcaaaatgaaatacagctgctgcaaccattaaatcttgaagttggtgtt
gaacgcaatttagccgctctctggtatcatgaaattcctgacattaaaatacttggacgt
ctcaagccaatgaatctgattctgagtcaggatgatataacaactatcttgagaacactg
aatgaaaatttaggggatagctctggccctccacctcctgtaccggaaaaaaaagatgta
ctaagcatccatagtggaacagcaagtgtttcccaacattctggagctggaataagaata
gtgacatctgctgttgtagaagcacgttcctcagttaagactaaaacagtactgaaattg
gacttccggattgattccctgactctagttttgtacagtccaaattccagccagcagcct
acaaatcagagtgaacgagatggtcatttgaaacttgcagaatttaaactgttgttaata
tcagcggctgtcaaaatggtgtcagatgggtcaatgaatgcctcagtcaaattaacaaac
tgcactttagatgataaacgacagacagtccagaacgctacaccaagaatggtagaaatg
aagtgtgaatccgaaaagaaagtcatgatggatatatcttataagcaggcgagagatggc
aacactgttcttgacacagttgttaatgagacatatgtctgtgctagcatagaatttctt
cttactgttgcggatgtatttctaaatgctactgctgaaagtgccgctgcgcagaaaaac
ttcaagcaaactttagctgtgaaggaacaagtttctgtacaaccggtatccacaatggaa
atacatgtcgtcattaaaaatcctgagattgtatttgtggctgatttaacaagaagtgat
gctcctgcactggtggctacagcacagtgtgaagtctccatgaaatatggccctgaaatg
tataaaatgacagctgctgttaaagatataatggtgaaagcctgcccttttcttccagat
atgagaaagggcagtattactacgatattgcagccctgtgacctcttttttgatatgata
cagtcaggtgaagatcctcagaaagctgatctgtcaattaagtccatcacaattaaggtg
acaccaattatcttaaatacagtaacaaccattacatcagcactcttcccaacaaatgag
actacagagaaagacattagtccagtacctccagatatttgggatcagaagaatattaaa
aatctaaaaatgtggtttcttgaagagtcaagtgaaaataaagatcctgcttctgtaatt
gagttggtccccacaggagagacgatgaaaatgaaaattgaaactgttgttataaccctt
gaagctggggttggccacaaaacagtgccaatgctattagcaaagtcatcattttctgga
gaagttcgaaactggagtagtctgatcaatctctcttctcgtcttgaattagaggtacat
tattacaatgagatgtttggtgtttgggaaccattgcttgaaccactggaagttgaaaac
actgatgaattcagaccttgggttctagaattgaagatgaagaagaaagccaagaaagct
ttagttgaatcagttgccgaagaagaaaactacaaagtcccagagtacaagacagtaata
actattttttctcaagatcagctgaacattacattgtccaaatgtggcctactaatgttg
agtaaccttggcacggcatttgcagaagcagcttcagaaacttcagaaatctccaaaaaa
gaccgggccccctttgtattaatgaattccttaggagtccccgccattgtcttgcctagt
gactccttcaatgttcttaatgttgaatcaaagggggattcatttcatcttgaagatggg
caaagtctaagtatggagtatgtcagaactaaaagtgatcaagaccagtttacagcaatg
actaccctaagcagcagagtattctacatctggatcactcctcagaaccactccactaca
gaaaagattcctctgacaaaagtgggacgaagtctttacagagtaagacacaatgactct
ggtgttgtgagatctgtagtttgtcaaattgacaccactgaggggagcaagatgataaca
gtgcattctccgattcagataaagaatcatttttcaattcctttgaaaatatttgaagat
ggaaaatgtttaggaatggctctaccagaggatgaatttaacatacctttgacctcttac
agagcgctactgttttttcgaccagtagctgatgaaggcggaacttctggagagtataca
tcaagtgaaggagttagttttgatgaaatggtgaagaattttggcaaagtgttgcagaag
aaatgtcagcctacaaaatcacctaaccacccactcatcatcaatattgttccaatgcaa
gatactctgatatcttcagtttgtatagatgatcaatgggatttaccatatgttgttcat
ttatggccttctgttcttctccgcaatcttcttccatatcagattgcttattccttagag
ggacagagtacaacctgcaatactctagaaaatggatgttcaactcagattcataacgcg
gtattagatcagagcaagctgcaattacatttacttaattatcttggtaaaaattggact
gctgaataccacactcgaatgaatcagcaagaaattagtttcgtcacattctcatgcatc
actgacgttgacaaggcagaattggacattgctgtgcacataacctatgccacgggacaa
gtgattatagcaattcacagtccatactggatggtaaataagactggtcgaatgttgcag
tacaaagctgatggcattcatcgcaaacatccacctgattacaagatgccacttcttttt
tctttccaaccaaaacacttttacaaaaataacaaggttcagctcatggtgacagacagt
gaactttctgatcacttttctctggatactgttggcagtcatggtttcgttagatgtaag
ggcaacaaaaatgaataccaagttggtgtcaccatacataacagcagtttcaacatcact
agaatagtgactttcacgcctttttttatgatcacaaacagaagtatgcatactttagaa
gtagctgaagaggacaatgaaaagtggataccaataatttcccagcagtgcactcctttt
tggcctgaaaaaaatgaaagcaagttacgtgttagagtagaacattctgacattccacca
aaaattattcggtttgataagcaagaaaattgtttgctgctacatttagacaacaggctt
ggaggcattattgtggatgttacaccagctgaacattcaacagcaattacattctctaat
tatcatgatggtgcagctcctttcctgatcattaaccataccaaagaagaaatggttgaa
tacgggcaaagttctcacaatgcaatggaagatgttctgtccccaaataaagcagttctg
tacacatgggctgatcctgtagggtctagagcattgaaatggaaatgtggaaagagcagt
ggggaagtaactcagaaagatgacttgatgacacctatccaagtgggaagcaaaactatt
tatttagtttcattttttgaaggcttgcagcgaattattctgttcactcaagatgaaaag
gttttcaaactaacatatgaaagtgaaaaagctgaactggcagaacaagaaatcattata
tcattgcaagatgttgggatttctttagtaaataactatttaaaacaggaagtaggctac
attggcatcacaagttctgatatcatttgggaaacaaaacctaagaaaaagtcaagatgg
aggccactgagtttgaaacaaactgaaatgctggagaaagaatttaatgactactgtgag
cactcacccacagaaaataaaatagtggagctggatgataatactccggtctgcttgaca
cctactggtaataacatgaaaatgcttcaaccaaatgaaatccctgtgagaagaagcttc
ttgccagctttaaaagtacaatacagtacatctgaacatcagtcatccttcagagtccag
atttatagaatacaaatacaaaaccagattcctggagccatatttccctttgtgttctat
cctattaaacctcccaagtccatctccttggattcagaacccaaaccttttactgatgtc
agtattgtcatgagaactgctgggcattctcaaatatcacgtataaagtattttaaggtc
ctaattcaagagatggatctccgattagatcttggttttctttatgcattggctgatttc
tttacacttgcagatgaagtgcccaaagagcaagagatagaactcttcaaaaaggatgta
gaatctgtacacgaggaattgaagaatatatcatcaacagacacatcacaaatcagccta
tatgaatattttcatatttctccaatcaagttgcacttaagtttttcacttagcactcct
ccagaagatagcaacaagggagagacacgcaaggagctaattccagttcagtccttaaac
ctcttgttaaagagtattggggccacactcacagatgtgcaggatgttgttcttaaattg
gcattctttgagctcaactaccacttttgtactacagagcaactgcagtgggctgtagtt
atgcattattcaaagcaggctattaagcaaatgtatgttcttattcttggactggatgtt
ttgggcaatccatttggattcataagagacttgtctgaaggagttgaagcattcttctat
gaaccttaccagggggctatccagggtccagaagagtttgtagaaggaatggcactgggt
cttaaagccctagttggtggtgctgttggtggattagctggtgctgcatcaagaataact
ggtgctatggctaaaggagtagcagcaataactatggatgaagactatcagcagaagcga
agggaagccatgaataaacagcctactggcctgaaagagggtatcactcgtggtggaaaa
ggcttggtatctggttttgtcagtggaataacaggaatagtaacaaagccaataagagga
gcccagaaagaaggagcaacaggtttcttcaaaggcgttgggaaaggattagtgggagct
gtagcaagacccactggaggaataatagatatggctagcagcacctttcagggaattaaa
agagctacaaatgcttccgaagatgttatgagcttgcgtcctccccgcttctttggtgag
gatggagtcattcgaccatacagattaagagacggtgctggaagtcaaatgttacagaat
attgaaaatggaagatttgccaaactgagatactttacacatgcaatggttaatagtaca
gatttactaatggtaacaaagagtggtatattatttgtgaccagaggtacctttggacag
ttgacatgtgaatggcagtacacctatgatgaatttaccaaggagccattcattgttgac
gggcggaggttgcgcattgaagcaaaggaacgagtaaagtctgtattccatgccaaagaa
tttggaaaaattattaattttaaaacgccagatgatgctaagtgggttctctcaaaactg
gaagaagtgagggagaaccacccaaaattatga
DBGET
integrated database retrieval system
