Zootoca vivipara (common lizard): 118077299
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Entry
118077299 CDS
T07275
Symbol
RNF180
Name
(RefSeq) E3 ubiquitin-protein ligase RNF180 isoform X1
KO
K15708
E3 ubiquitin-protein ligase RNF180 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118077299 (RNF180)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118077299 (RNF180)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118077299 (RNF180)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF180_C
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-RING_5
RING_XB3-XBAT31
PDCD7
GPS2_interact
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
118077299
NCBI-ProteinID:
XP_034956786
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All DBs
Position
LG19:24268192..24316624
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AA seq
561 aa
AA seq
DB search
MNIQGQGDMLRCWKCRKYVANSDCLINYQTADLVFEEPHSSTASQDICNVWHMNIEALPD
WVTHIIENAQWTTGKLNCPFCGARLGGFNFVNNTKCSCGQFTNIHLCKRRTDYQTVSSVT
SAISPLKHLSLCKVHSDFNNEIWQCVTGGSLEDRNQRLPYVAKNNNGIGRLMEALCLEVR
STNFEMNSKETHFKVSNPKTSISASLAVNDKYTVKAFHRKSQSLDMNFREKLVLLPTLYG
TSTAKRPVFSRQHEAQPFYTKGCLQLKSSRTHTFFHFPLKSDAGELPNSFSVTSYGAFAQ
EETEFNHGLKASKQYLESTTADQQLFLSSESTTEEDTVQKHITPLGLLQPFTTVDQKLNK
RKRNQLNSLRRKKRWPERWPQKQAMKTEEEHEHWQDKESYLCAVCLDVYFNPYMCYPCHH
IFCEPCLRTLAKDNPTSTPCPLCRTAIAQVFFQSELNNSTKAHFPIEYSKLKENFQESGL
AKWPLPSCRKAFRVIEGLENTDSFTRRHFPHAAHRMDYMDFEDDSRGLRFDMDMVIIYIY
SINWVIGFILFCFLCYFFFPF
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccaagggcagggtgacatgcttcgttgctggaagtgtcgaaaatatgtagct
aattctgattgcctcataaattaccaaactgcagacttggtctttgaagaacctcactct
tctactgcctctcaggatatctgtaatgtatggcacatgaacatagaagcacttccagat
tgggtgactcatataatagaaaatgcacagtggacaactggaaagctgaactgcccattc
tgtggggcccgtctggggggctttaatttcgtcaataatacaaaatgctcctgtggccaa
tttacaaacatccatctttgcaaaaggcgaactgactaccaaacagttagttcagttaca
tcagcaatatcgccactgaagcacttgtctctttgtaaagttcattctgactttaacaac
gaaatatggcagtgtgtgacaggtggatctttggaagatagaaatcaaagacttccatat
gtagccaaaaataacaatggcattggacgattaatggaggcactttgcctagaggtaaga
tcaaccaactttgagatgaacagtaaagaaacacacttcaaagtgtctaatccaaaaaca
agtatttcagcttcactggctgtgaatgacaaatacactgtaaaagcttttcatagaaaa
tcacagagtttagacatgaacttcagagagaagcttgttttgctgcctactttatatgga
acttccacagctaagagacctgttttctccaggcaacatgaagcacagcctttttacaca
aagggctgcttacaattaaagtctagcagaacacatactttttttcatttcccacttaaa
tcagatgctggtgagcttccaaacagtttttcagttacttcttatggtgcatttgcacaa
gaagagacagagtttaatcatggtttaaaagcttccaaacagtatcttgagagcactact
gctgaccagcagctgttcctgtcttcagagagcactacagaagaagatactgtgcagaag
cacatcacacctcttggtcttcttcagcctttcacaactgttgatcaaaagttgaacaag
agaaaaaggaaccaattgaacagtttgaggagaaagaaaaggtggccagagaggtggcct
cagaagcaggctatgaaaacagaagaggagcacgaacactggcaagataaggaaagctac
ctctgtgcagtgtgcctggatgtttattttaatccttacatgtgctatccctgccaccac
atcttctgtgaaccttgcctacgcacactcgccaaagataacccaaccagcactccgtgt
cctctgtgccgcacagcaattgcccaagtttttttccaatcagaactgaacaattcaaca
aaggctcactttcctattgaatattcaaaattaaaggaaaactttcaagaatccggttta
gcaaaatggcccctccctagttgcaggaaggcattcagagttattgaaggtcttgaaaac
acagattcctttacacgaaggcatttcccacatgctgctcacaggatggactatatggac
tttgaggatgatagcagaggattgcgatttgacatggacatggtgataatctacatttat
tccatcaattgggttataggattcattttgttctgctttctctgctattttttctttccc
ttttaa
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