Zootoca vivipara (common lizard): 118077551
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Entry
118077551 CDS
T07275
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04140
Autophagy - animal
zvi04148
Efferocytosis
zvi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118077551 (VPS16)
04148 Efferocytosis
118077551 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118077551 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118077551 (VPS16)
Membrane trafficking [BR:
zvi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118077551 (VPS16)
Hops complex
118077551 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF3939
Motif
Other DBs
NCBI-GeneID:
118077551
NCBI-ProteinID:
XP_034957077
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MDCYTANWDPLGEAAYYRKLDLYTMGWNLREDLRDCLVAAAPYGGPIGTAEPAPLPGQRE
TFLVPAVPLREISQFPAPLEIYTASGVLLASIPWKNCPAVHLGWTTSEDLLCIQEDGSVL
VYSLFCEFKRRFSMGNEVLQNHVLEAKVFHTEYGTGVAILTGAHRFTIATNVEDLKLRRL
PQVPGVQKPPSCWAVLCQERVTVLLVAVGQELYLLDSTTCSPVTLPGLSPHAGSFLRMAV
SFNYRFLALFTDTGYIWTGKSNLKEKLGESICEFRAPPKQMVWCTRSRSKQRAVVMAWER
RLLVAGDAEQCIQYPLDEDSYLVPELDGVRIFSRSTHEFLHEIPEASQEVFKIASMAPGA
LLMEAQKEYEKESQKADEYLREIKDQNLLPEAVEQCIRAASYEHEPEIQKSLLRAASFGK
CFIDKFPPEHFVETCRDLRVLNAIRDYQIGIPLSFDQYTQVTTEVLLDRLVLRRLYPIAI
KICEYLRLSEFQGISRILAHWACYKVQQKDKSDEEVAQAINQKLGDTPGISYSEIAARAY
ECGRTELAIKLLEYEPRSGKQVPLLLKMKRSQLALSKAIESGDTDLVYTVVLHLKNELNR
GAFFMTLQNQPVALSLYRQFCKYQELDTLKDLYNQDDDHQELGNFHVRASYASDKQIDGR
VASLQNAVDEYYKAKNEFAAKATEDQIKLLRNQRRLQADFDKPYLDESLHDTVYNLILEG
NHKRAEQFYRDFKIPDKRFWWLKINALAEQGDWEELEKFSKSKKSPIGYLPFVEISMKHH
NRHEAKKYGPRVAPEQRVKAFLLVGDLSQASEAAIERKNEAEMNLVLSKCTAAADASVVA
KINLAKAQLGKK
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcaaactgggaccccctcggggaagcggcctattaccggaagctg
gatttgtacaccatgggctggaacctgagagaagacctgcgggattgcttggttgctgcc
gcgccctacggaggccccatcggtacggcagagccagctcctcttcctgggcagagggaa
accttccttgtgccagctgttcctttaagagaaatctcccagttcccggcccctctggaa
atctacactgcctcgggggtcctcttggctagcattccgtggaagaactgtccggccgtg
caccttggctggacgaccagtgaggacctcctttgcattcaggaggacggctcagtcctc
gtctacagcctcttctgtgagttcaagcggcgcttcagcatgggcaatgaggtgcttcag
aaccatgtgctggaggccaaggtgttccacacggaatatggcacgggggtggccatcctc
accggagcccaccgcttcaccattgccaccaacgtcgaggacttgaaactccgcaggctg
cctcaggtgccaggtgtccagaagcccccctcctgctgggccgtcctgtgccaagagcga
gtgaccgtcctcctcgttgccgttggccaagagctatacctacttgacagcacaacctgc
tccccggtgaccctgcctgggctgagtcctcacgccggctcctttctgcggatggcggtg
tccttcaactatcgcttcctggctctcttcaccgacacaggatacatctggacggggaag
tccaaccttaaggaaaaactgggtgagtccatctgcgaatttcgagctccaccaaagcag
atggtctggtgcacccgctctcgaagcaagcagcgtgccgtggtgatggcgtgggaacgg
cgcctcctcgtggctggggacgcagagcagtgcattcagtaccctctagacgaggattcg
tacctcgtgccggagctcgatggcgtgaggatcttctcccgttccacccacgaattcctc
cacgagatcccagaggccagccaggaagtcttcaagattgcatccatggcgccaggagca
ttgctgatggaagctcagaaggagtatgagaaagagagtcagaaggctgacgagtacctg
cgagagatcaaggaccagaatctgctcccggaggccgtggagcaatgcatcagggcggcc
agctacgaacacgagcccgagatccagaaatctctccttcgggcggcttcctttgggaaa
tgcttcattgacaagttcccgcccgagcattttgtggagacgtgcagggatctgcgggtg
ctcaacgccatccgggattaccagatcgggatccccctcagctttgaccaatacacacag
gtcaccacggaagttttgctggacaggctggttttgcggagactttaccccatcgctatc
aagatctgtgagtacctgcgtctctctgagttccaggggatcagccgcatcttggcgcac
tgggcctgctacaaggtacaacagaaagacaaatctgatgaagaggtagctcaggccatc
aaccagaaactgggcgataccccgggcatctcgtactcagagatcgctgcccgggcgtac
gaatgcggccggacagagctggccattaagctgctagagtacgagccccggtctgggaag
caagttcctctgctgctgaagatgaagaggagccagctggcacttagcaaggccatcgag
agcggagacaccgacttggtttacacggtcgtcttgcacctgaagaacgaactgaaccgt
ggcgccttcttcatgactctgcagaaccagccggtggctttgagcctctatcgccagttc
tgcaaataccaagagctggatactctcaaagacctctacaaccaagacgacgaccaccag
gagctgggcaacttccacgtacgtgccagttatgccagcgataagcagattgacgggcgg
gtggccagtttgcagaacgcagtggatgaatactacaaagccaagaatgagtttgcggcc
aaggccaccgaagaccagatcaagctcctccgcaaccagcggcgcctccaggccgacttc
gacaagccctacctggacgagtccctccacgacacagtctacaacctaatcttagagggg
aaccacaagcgagcggagcagttctaccgcgacttcaagatccccgacaaacggttctgg
tggctgaagatcaacgccttggctgagcaaggagattgggaagagctggagaagttctcc
aagtctaagaagtcccccattggatacctgccttttgtcgagatcagcatgaagcaccac
aaccgccacgaagccaagaagtacggcccccgcgttgccccagagcagagggtgaaagcc
ttcctcctggtaggggacttgagccaggcttccgaagccgccattgaacggaagaacgag
gcagagatgaacctcgtcctctcgaagtgcacggcagccgcagacgcttctgtcgttgcc
aagatcaaccttgccaaagctcagcttggaaagaagtag
DBGET
integrated database retrieval system
