Zootoca vivipara (common lizard): 118078173
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Entry
118078173 CDS
T07275
Symbol
NRDE2
Name
(RefSeq) nuclear exosome regulator NRDE2
KO
K26109
nuclear exosome regulator NRDE2
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118078173 (NRDE2)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
118078173 (NRDE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_19
TPR_16
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
118078173
NCBI-ProteinID:
XP_034957789
LinkDB
All DBs
Position
Unknown
AA seq
1154 aa
AA seq
DB search
MALFPAFAGAAKPGEAPAGETECSKRELNWLTNPSFCSEDALRLHQHALKATDLASDESL
LQRTTSSLETLRESEVSESVQKPAKKRKKKKKQRDHKKVKKRSRKHQGTSESESDADDVK
DNRNNEKEAELNLGEKASNVSIHSIWLDDVQGVTAEVFRTDKKPDPANWQYKSLYRGNIA
RYRRRSNFCLGVDPRRQHIAWESSSAEKKPSHKRPERYFAKGGRKLLNADGIPVSTKSQG
SLSGPTAWIPISEQDSADVLATGWANPLGIYDPGTTLWLQGKGPPEHDSRKPQEAQESSE
NGDSRLLARVEDYNRKVREDPGDIKAWMDFVSFQDEVMRGPSCYAISEGERETRKVSLKL
ILEKKLAILERAIESNPNNADLKLARLKLCTEFWEPSAVIKEWQKLVFLHPNNPALWQKY
LLFCQSQFSTFAVSKVHSLYGKCLSTLSAVHDGSMVSHPALPHTEEAMLAIFLQQCHFLR
QAGHSEKAISLFQALIDFTFLKPDSVRELPTRRQVEFFEPFWDSGEPRIGEKGAKGWKAW
MHQQEKGGWVAIIPPDEDEEEAEEEEEIKDRTLPKWQNWLHVERSREGRHWLPWRPDKTK
KETVDDCEDPERQVLFDDLGPSLIQISSPDLQFQLLCSFLQFLGVPCSCGLLPSFLYTAM
DENNIFEDQQHGQRPLTSFDLSLPGVSRIGQMGSMLQGVRRIGHPKEGEEFIQNFFHMIL
PLLSGKEKSNLSNFWLQYEVSKVIQCLETGNKKKLKWQGKRSKKLAKNLLKTHENRNDVS
LWRLYAYLEWLLGNVEDARKVFDMSLSTAGTAGIQNPQLCNLGLLYAELEAESLGSLEGT
LESRAVHILTRLAEQGPYAPYSGQTLSVNILRARKTYEHLLQDYLSKRGASEQEQIHDYS
DHLVGLVGCYTLFQYLTLGIDSAVSVYRQVFEKLEGESPGGQNCAATLEAVALMHVHLLR
YHMRTSVYPLAPLREALLGALKRYPSNQPLWRAYIQIQSKSHNASKARRFFDSVARAAKS
LEPWLFAIKAEQMRKKLVESVQRVATGDVYATIPETGLTNRIKALFEHAIETENGAHCPL
LWRLYIYFMVSLGDKGKSKGVFYRALQNCPWTKVLYMDAISYFPDELQEILDLMTEKELR
VRVPIEELELLLED
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggctctttttccggctttcgcgggcgctgctaaacccggagaggcgccagcgggcgag
accgagtgctccaagagagaattgaactggctaaccaacccgagcttctgcagtgaagat
gctctgagactacaccagcatgctttaaaggccacagaccttgcctcggacgaatccctg
ctccaaagaacaacctccagcttagagacattgcgagaaagtgaagtcagcgaaagtgtc
caaaagccagctaagaaaagaaagaaaaagaaaaaacagcgagaccacaagaaagtaaaa
aagagaagtagaaagcatcagggaacaagtgaatcggaatcagatgctgatgatgtgaaa
gacaatagaaataatgaaaaagaagcagaactgaatttaggagaaaaagcttcaaatgtg
agcattcactccatctggctggatgatgttcagggtgtgacagcagaagtattcagaaca
gataagaaaccagatcctgccaactggcagtataagtctctgtatcgagggaacattgca
agatacaggagaagaagcaacttctgtcttggcgttgatccaaggaggcaacatattgcc
tgggagagttcctcagcggagaaaaagccctcccataagcggcctgagcgttactttgcc
aaaggtggccggaagctgttgaatgcggatggcatccccgtcagcacaaaaagtcaaggc
tctttgtctggcccaactgcttggatacccatttcggagcaggactcagctgatgttctg
gccacaggctgggcaaatcctcttgggatttatgatccagggaccacgttgtggctgcaa
gggaaggggccccctgagcacgattcacgaaagccgcaggaagcgcaagagagctctgag
aatggggattcccgcctcctggccagagtggaggactataacaggaaggtcagagaggac
cctggagatatcaaagcatggatggattttgtttcttttcaggatgaagtcatgagaggc
cccagctgctatgccatcagcgagggagaacgggaaacgaggaaggtgtccctcaagctc
atcttggagaagaagctggccattctggaaagagctattgagagcaacccaaacaacgct
gacctgaaactggcccggctgaagctttgcacagagttttgggagccgtcggctgtgatc
aaggaatggcagaaattggtgttcttgcatccaaacaacccggccctgtggcagaaatat
ctcctgttctgccagagtcagttcagcacctttgcagtttccaaagttcacagtctctac
gggaaatgcctgagtactttgtcagcggtgcacgatggcagtatggtgtctcatccagcc
ctgccgcacacagaggaagccatgctggccatcttccttcagcagtgccatttcctccgg
caggccggccattcggagaaagcaatatcgttgttccaggccctgattgacttcaccttc
ctgaaaccagatagcgtaagggaactgccaacaaggcggcaggtggagttctttgagccg
ttttgggacagtggcgagcctcggattggagaaaaaggagcgaaaggctggaaggcctgg
atgcaccaacaagaaaagggtggctgggttgccatcattccacctgatgaagatgaggaa
gaggcggaggaggaggaagaaataaaggatagaactttacccaagtggcaaaactggctg
catgttgaacgttctcgtgaaggaaggcactggctgccttggcggccggacaaaaccaag
aaggagacagtagatgattgtgaagatccagagagacaggtcctgtttgatgaccttggt
ccatcgctaatacaaatttccagcccagatcttcagtttcagctgctctgctcgtttctg
caattcttaggtgtcccatgtagctgtggcctccttccttccttcctctacacagcaatg
gatgagaacaacatctttgaggatcagcagcatggccaacgacctctgacttcttttgac
ctgtcacttcctggagtcagtagaattggccagatgggctcgatgctccaaggagttaga
cgtattggccaccccaaagaaggggaggagttcatacagaatttcttccatatgattctg
cctctgctttcaggaaaagaaaaatccaatctatccaacttttggcttcagtatgaagtc
tctaaggttattcagtgtttggaaacaggcaacaaaaagaaactgaaatggcaagggaag
agaagtaagaaattagccaagaaccttcttaagacccatgagaacagaaacgatgtctcc
ctttggcgactctacgcctacctggagtggttgcttggcaacgtggaagatgctaggaaa
gtttttgatatgtctctgagcacggcgggaacagctgggatccagaacccccagctctgt
aacctgggcctgctttatgccgaactggaagcagagtcgctggggagcctggagggaacg
ctcgagtctcgcgctgttcacatattgaccaggctggccgagcaaggaccttacgcgcct
tacagtggacagacattatccgtgaacattttgagagctcggaaaacatacgagcatctt
ctccaggattacttgagcaagagaggcgcctctgaacaagaacagatccacgactactcc
gaccacctcgttggcttggttggttgttacacccttttccagtatttgactcttgggatt
gattctgcagtgtcagtatacaggcaggtttttgagaagctggaaggcgaaagccctggc
ggtcagaactgtgccgccacccttgaagctgtcgccctgatgcatgtgcatttgctcaga
taccacatgagaacgagcgtctatcctttggctcccctccgcgaagcactgctgggggct
ttgaagaggtatcctagcaaccagcctctctggagggcatatatccagatccaaagcaag
tcgcacaacgctagcaaagcgcggcggttttttgacagcgttgcaagggccgcgaagtca
ctggagccgtggctgtttgcaatcaaagctgagcagatgaggaaaaagcttgtggaaagt
gtgcaaagagtagccactggcgatgtgtatgcaaccatccccgaaactgggttaaccaat
cgaatcaaggctttatttgaacatgccattgagactgaaaacggtgctcattgtccattg
ctttggaggctatatatatactttatggtttctttaggagataaaggaaaaagtaaagga
gtgttttatagagcgcttcaaaactgcccctggacaaaagtgctgtatatggatgctata
agctattttccagatgagctgcaagagatccttgatctaatgaccgagaaggagctgaga
gtgcgggtaccaattgaagagctggagctgctcttggaagactag
DBGET
integrated database retrieval system
