Zootoca vivipara (common lizard): 118078194
Help
Entry
118078194 CDS
T07275
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04382
Cornified envelope formation
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
zvi04518
Integrin signaling
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118078194 (COL4A6)
04518 Integrin signaling
118078194 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118078194 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118078194 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118078194 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zvi04147
]
118078194 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
zvi00536
]
118078194 (COL4A6)
Exosome [BR:
zvi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118078194 (COL4A6)
Glycosaminoglycan binding proteins [BR:
zvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118078194 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118078194
NCBI-ProteinID:
XP_034957823
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MVFAKKEEKKKGKERRLRVIPDRGAGRRERPEELSSPAGAKQFLCRSRCTMRAGLVAFLL
AFCLTPDSVNGGGKKFYHGPCGGRDCSAGCQCFPEKGGRGQPGPIGNQGLMGVPGFTGPE
GLRGPKGERGSTGAPGTAGLKGDKGPMGVPGFPGISGVPGHPGQPGHRGLPGLDGCNGTI
GSPGVPGPDGFPGVQGPPGSPGPKGPKGEPSFSQGVFKGMKGERGRSGLDGAVGPKGFPG
PVGPIGPSGLPGFLGPPGPPGPPGPVGNSGLVFQGEKGAKGDVGLPGPAGPPPSTGIQEF
MGFPKGQQGAKGVPGPEGFPGPPGFLGPPGIRIFGEKGEKGVPGLPGPRGDMGFKGFDGG
PGRPGLPGEPGFPGRDGSPGGKGDFGDVGPPGPTVTVDGEGVVVSGPPGEPGTRGTPGAR
GDEGFNGLPGLPGQAGFPAPTPGSPGRMGIPGDLGPKGDPGDPGRETIGLPGPPGRDGAP
GLPGAPGLPGPSLPIFTPGAIVAGEPGETGTPGQRGPPGLFGVKGYKGEAGDCACDGGIT
RAGLKGEPGARGQPGRPGEPGPKGPLGDPGDGAPGLPGQPGFFGQPGLPGIKGEKGEPYL
SSGRGTQGDPGNIGPRGPSGASGVPGRDGIPGLPGRPGPPGDGGLGFPGDKGFSGLPGLK
GQRGESGLPGVGFPGPAGVPGPPGDPGIDGYPGQPGLPGAPGITLPCVIPGAFGPPGLPG
SPGFPGSKGSKGLPGIPGQPGLNGFKGQQGSPGLVGPSGAPGFSGIRGELGPQGFPGPDG
TDGLPGNPGPPGLPGPRGPPGEVFGAESGAPGQPGLPGLAGDKGILGEPGLPGQKGADGR
PGLSGVKGGRGEPGLLGIDGPRGPPGPGGPFGIKGKPGPMGAVGFPGSPGCQGIPGEKGR
SGDAGAPGPTGMKGFPGLVGLPGRPGELGLPGPLGPPGADGSPGFPGLKGEKGFAGVIGF
PGMPGLPGIPGVNGPKGASGLPGRDGNIGFPGLDGLKGDRGDRGPPGPPVLRPPELALAF
KGSKGEPGFSGNAGFTGPRGNKGLPGPRGQPGPPGIAGLPGREKGPPGDSGLPGTSGSPG
FPGQKGTSGILGFPGMPGGNGDEGFSGPSGFPGNMGLRGSKGDRGESFGIPGGVGPKGEQ
GGPGLPGARGLDGPKGEPGFPGSLGIKGNKGAPGDFGQDGPPGFPGVGTSRGNPGFPGIP
GQRGPPGLRGLPGIAGLKGFLGSPGLIGLNGLPGTKGSPGTPGLSEIGLPGPAGMPGAKG
EQGVPGFQVGPPGLPGQKGPAGDLGRPGAMGSPGLQGPPGISLPSKIPGRPGDAGRPGED
GRPGFPGPPGPRGPPGPASNQGVTGDPGLPGHPGLKGFKGDMGFPGLGGVPGASGFKGFR
GDPGLMGMPGKDGPPGDSGFPGPKGEAGRRGFPGLQGAPGLVQKVEEIKVAPGLIGLPGI
DGIPGLNGDTGFQGLTGPQGPKGMAGRQGQMGVNGLPGSPGVVGDPGTPGSTGPPGFEGM
SGKPGPAGLPGMPGRSIGVGYTLVKHSQSEQIPPCPVGMNKLWEGYSLLYVEGQEKAHNQ
DLGFAGSCLPRFSTMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVSSFQISQYISR
CSVCEAPSQAVAVHSQDITIPQCPEGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLED
FRATPFIECNGARGTCHYFSNKYSFWLTTVEQTQQFADFTISETLKAGQLRTRVGRCQVC
MKNL
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgcaaaaaaagaagaaaaaaagaaaggaaaggaaagaaggctcagagtcatt
ccagaccggggggccgggcgccgtgagcgacccgaggaactgagttctccagcgggagcg
aagcagtttctttgccggtcacgctgcaccatgcgcgctgggctggttgcgttccttctt
gctttctgcctgactccagattctgtaaatgggggcgggaagaaattttatcatggacct
tgcgggggtcgagactgcagtgcaggctgccagtgctttccagagaaaggtggtcggggt
caaccaggaccaattgggaaccaaggactgatgggtgttccagggtttactgggccagaa
ggcttgagggggccaaagggagagagagggagcacaggtgccccaggtacagctggactg
aagggagataagggcccaatgggagtccctggatttccaggaatatccggagttcctgga
catcctggtcagccaggacacagaggcttgcccggcctggatggctgtaatggcactatt
gggagtcctggggttccaggaccagatggatttcctggtgtgcaaggtcccccgggtagc
cctggaccaaaggggccaaaaggcgagccttctttttcccagggagtttttaaaggaatg
aagggagaaagaggtcgttccggattggatggtgcagttggccctaaaggtttccctggc
cctgttggtcctattggtccatctgggctacctggctttctggggccaccaggtccacct
ggccccccaggccctgtgggtaacagtggcctagttttccaaggagaaaaaggagcaaag
ggagatgttgggcttccaggacccgctggccctccaccttctactgggatccaggaattc
atgggattccccaaaggacagcaaggagctaagggtgttcctggtcctgaaggctttcct
ggtcctcctgggtttcttggtcctccaggcattagaattttcggagaaaagggagaaaag
ggtgtacctggtttgccagggccaaggggagatatgggatttaagggatttgatggaggc
ccagggagaccgggtttaccaggtgaaccaggatttcctggacgggatggatcaccagga
ggaaagggcgactttggggatgttggtccaccgggtcctacagttactgttgatggagaa
ggtgtcgtggtctcaggtcctcctggagagcctgggacacgcggaacccccggcgctaga
ggtgacgaagggttcaatggtttaccaggccttcctggccaagcagggtttcccgcacct
actccaggttccccaggtcgtatgggaatcccaggtgatctgggaccaaaaggagaccca
ggagacccaggcagagaaacaattgggttgcctggtccaccaggcagagatggagctccc
ggtttgccaggtgctcctgggttacctggaccatcacttcccatatttactccgggagcg
atcgttgctggagaacccggggagacaggaaccccaggacagagagggccaccaggactg
ttcggggtaaaaggctacaaaggtgaagctggagattgtgcttgtgatggagggatcaca
cgagcaggcttgaaaggggagccaggtgcccgtggtcagcctggaagacctggtgaacca
ggcccaaaaggacctttgggagatccaggagatggtgcaccagggctacctggtcaaccg
ggtttctttggtcagcctggtcttccaggcatcaaaggagagaaaggagaaccatatctg
tcctcaggcagaggcacccagggagatccagggaatataggccccagagggccttcaggc
gcatcaggagttcctggtagggatggcatacctggtttgccaggtcgaccaggcccccca
ggtgatggtggattgggctttccaggagacaaaggtttttcagggttacctggtttgaag
ggtcagcgtggagagagtggtcttcctggagttggtttcccaggtccagctggagttcct
ggccctccaggtgacccaggaattgatggatatccagggcaacctggtctcccaggtgct
ccaggtataactttgccctgtgtgattcctggagcatttggtccacctgggcttccagga
tccccaggatttccaggctccaagggcagcaaaggcctgccaggcattccagggcagcca
ggattaaatggctttaaagggcagcaaggatcaccagggttagtagggccttcaggagca
ccaggcttctctggcattcgtggagagctagggccacaaggattcccaggacctgacggg
acggatggattgcctggaaatccaggcccccctggtttgccagggccaaggggcccacct
ggtgaagtgtttggtgctgaaagcggagctccagggcaacctggtctgccagggttggca
ggagataaaggcatcctcggggaacctggccttccaggtcagaaaggtgcagatgggagg
ccaggtctgtcaggtgtgaaaggcggacgtggggaaccaggccttctgggtattgatgga
ccacgaggacctccaggacctggaggcccttttggcattaaaggaaagccaggtccaatg
ggagcagtcggcttcccaggatcaccaggctgtcaaggaattcctggagaaaaaggcaga
agtggtgatgcgggggcaccaggccccactggtatgaaggggttccctggtcttgttggt
ctcccaggacgtcctggcgaactagggttacctgggccacttggccctccaggtgcagat
ggaagtccaggttttcccggattaaaaggagaaaagggctttgcaggtgtcatcggcttc
cctggaatgccaggcttacctggaatcccaggggtgaatgggccaaaaggagcttccgga
ttaccaggaagagacggaaatattgggtttcctggactcgatggtctaaaaggagacaga
ggtgaccgtggtcctccaggacctcctgtccttagacctccagaactggctcttgcattc
aaaggaagcaaaggagagcctggtttttctgggaatgcagggtttacaggacctagaggg
aacaagggactccctggtccccgtggacagccaggacccccaggaatagctgggcttcca
ggcagagagaaaggacctcctggagactcaggtctccctggaacatctggttctcccggc
ttcccaggacagaagggaacctctggcatcctaggttttccaggaatgcccggaggaaat
ggtgatgagggtttctcggggccatctggattcccagggaatatgggattgcgtggttca
aagggtgaccgaggagaatcatttggaatcccaggtggtgtaggacctaaaggagaacaa
gggggccctggacttccaggtgcaagaggacttgatggaccaaagggtgagccaggattc
ccaggaagccttgggataaaaggaaataaaggtgcaccgggggactttggccaagatgga
ccaccaggtttccctggagttgggacttcaaggggcaacccaggttttccaggcattcct
gggcagcgtggccctccaggacttagagggcttcctggcattgcagggctaaaaggattc
ctcggctctccaggcttgattggcttaaatggtttaccaggcacaaagggctcacctgga
acaccaggtctgagtgaaattggacttccggggcctgctggaatgccaggtgccaaagga
gaacagggtgttcctggttttcaagttggacccccaggcttgcctggacagaagggacct
gcaggagacttgggtcgtcctggagctatgggttctcctggtttgcaagggcctccaggc
atctctcttccatcaaaaattcctgggagacccggtgatgctggacgtcctggagaagat
ggtagaccaggcttcccaggtccccctgggccacgtggaccaccaggcccggcctccaac
caaggtgttactggtgaccccggcctccctggtcatcctggactaaaaggcttcaaaggt
gacatgggcttccctgggttgggcggagtcccgggagcatcaggattcaaaggcttcaga
ggtgacccaggtttaatgggaatgccaggtaaagatggtcctccaggagattccggtttc
cctgggccaaaaggtgaagcaggccgtcgagggtttcctgggcttcaaggggctcctggt
cttgtgcagaaagttgaagaaatcaaagttgctccaggcttaattggactgccaggaatt
gatggaatccctggtttgaatggagatactgggttccagggcctgactggaccacaaggc
cccaaagggatggcaggtagacagggccagatgggagtcaatggtttgccagggtcgcct
ggtgtagttggagatccagggactccaggaagtaccgggccaccaggatttgaaggaatg
tctgggaagcctggtcctgctggtttacctggcatgccgggccgcagcattggggttggc
tacactttggtgaaacacagccagtcagaacagatcccaccatgccctgtagggatgaac
aagctctgggaagggtacagtttgctgtatgtggagggccaggagaaggctcacaaccag
gaccttggttttgccggctcctgcctgcctcgcttcagcacgatgcctttcatttactgc
aacattaatgaggtctgctactatgccagtcgcaatgacaaatcctactggctctccacc
acagctcccatccccatgatgcctgtcagcagcttccagatctctcagtacatcagccgc
tgctcagtatgtgaagctccttcccaggccgtggctgttcacagtcaggacatcaccatc
cctcagtgcccagaaggctggcgtagcctctggattggatattccttcctcatgcacact
gcagctggagctgaaggtggcggccagtccctcgtctcccccggctcttgcctggaagac
ttccgtgccacccctttcatcgaatgtaatggtgcccgagggacctgccactacttctca
aacaagtacagcttttggctgacaacggttgagcagacccagcaatttgccgactttacc
atctccgagactctgaaagcaggtcagctccggacacgagttggtcgatgccaagtgtgc
atgaagaacttgtag
DBGET
integrated database retrieval system
