Zootoca vivipara (common lizard): 118078195
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Entry
118078195 CDS
T07275
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04382
Cornified envelope formation
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118078195 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118078195 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118078195 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118078195 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zvi04147
]
118078195 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
zvi00536
]
118078195 (COL4A5)
Exosome [BR:
zvi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118078195 (COL4A5)
Glycosaminoglycan binding proteins [BR:
zvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118078195 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118078195
NCBI-ProteinID:
XP_034957827
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MKLSPGASCLLPPTPPPLLVLLLLLLLGLWSQDAGAAACHGCSSGSKCDCSGTKGGKGER
GFPGLEGQPGLPGFPGPEGPAGSRGEKGDDGFPGPPGPKGIRGPPGLPGFPGTPGLPGLP
GQDGAPGPPGIPGCNGTKGERGYPGSSGFPGLQGPPGPPGLIGMKGEPGEILTSLQPGQK
GEPGFPGLPGLPGPAGPIGAQGPIGPPGPPGLLGPPGPPGLPGPKGNMGLNFQGPKGEKG
EQGLQGPPGPPGQLGEQKRTNDVEFQKGDQGVPGDRGPIGPPGLPGPPGLPGGGKGEKGE
QGEPGKRGKPGKDGESGQPGLPGLPGGRGIPGFPGRDGEKGSKGDAGPPGPPGHAILRPD
TGATVGPKGSKGLPGIPGDKGERGYPGQQGPPGLPGSPGIPSVGSPGTPGFPGERGQKGD
QGLPGIPIPGPPGNDGQPGSPGPPGPPGPPGTTIPPIDRLCERGPPGFPGLPGEQGFMGE
RGQKGDKGDTCFNCIGIGTSGPPGEKGVPGLPGSPGSPGFPGLKGDKGVPGLVGTVGPQG
LPGPPGPPGRPGTKGDPGDVLAFPGLKGEKGNPGFPGPPGLPGLDGSRGQDGLPGLPGPK
GEPGGISFKGDRGLPGDPGIPGIPGDRGPPGSPGFGPQGPPGQKGIQGVSGRSGAPGGPG
PKGEPGQTITEAGSPGNPGPPGRDGEVGLPGDPGQPGAPGLPGIPGSKGDPGLPGIGLPG
PPGPKGYPGLPGLPGVPGNPGRAGQDGPPGLPGLAGQKGDRGFGVPGPAGPPGPPGFKGA
QGPKGDSGFPGTPGLPGRIGFDGTPGPKGDPGPRGQPGLAGPPGIPGIGGQGPPGAPGPP
GPVGPPGSSGLQGIPGEKGDPGSPGFDIPGPPGDRGSQGFPGSPGLPGPPGSPGPLGRDG
LPGIPGNKGDMGVMGAPGPQGSPGTSGRNGLPGLKGNDGLPGQPGRPGPAGQKGSKGETG
LRGLPGTIDPAQLGSKGEKGEPGSPGIPGLTGQKGYPGTPGDAGTPGLVGQPGIPGLPGP
KGDSGFPGPPGPTGPPGQKGASGEMGLPGPPGQKGFQGIAGRPGQPGSPGFPGLKGDKGD
PGLSDIGIPGPPGPKGDPGLPGYTGSPGNKGSPGNPGLPGLAGSPGTKGDAGLPGFPGTP
GIPGPKGIDGPPGNPGVPGSPGPPGDIGHPGPPGLVGEKGQPGRDGIPGPAGQKGEPGQP
GFGRPGPPGLPGLSGQKGDSGLPGPSGPPGAPGLKGETGGPGFRGLPGSPGSPGLPGPPS
EGPKGSPGQPGIPGRPGATGPPGLPGSEGPRGPPGTGGVRGEKGNPGQPGQPGVPGLKGD
QGQPGRPGDSGRPGLNGMKGDPGVPGVPGFPGMKGPLGPSGPPGLGGDPGLPGSPGPPGI
PGPAGQTIIVKGDPGPPGPPGQPGMKGLPGLSGPPGLPGPIGLPGDPGRDGLPGFDGPGG
RKGERGLPGQQGQRGSQGPPGPDGLQGPPGLPGTASVAHGFLITRHSQTTDTPFCPQGTT
QIYNGFSLLYVQGNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLST
PEPMPMSMEPLTGKNIQPFISRCTVCEAPAMVIAIHSQTIQIPPCPQGWDSLWIGYSFMM
HTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEVAEMFSKP
QSETLKAGDLRTRISRCQVCMKRT
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgagcccgggggccagctgcctgctgccgccaacgccgccgccgctgctggtg
ctcttgctgctactgctactgggtctctggagccaggacgctggagctgcggcatgccat
gggtgttcatcaggatccaaatgtgactgtagtggaacaaaaggcggaaagggtgagaga
ggcttcccaggtttagaagggcaaccaggcttacctggatttcctggaccagaaggacca
gctgggtcacgaggcgaaaaaggggatgatggatttccagggcctcctggacccaaagga
attagagggcctccaggtctaccaggctttccaggaacaccaggacttcctgggctacca
ggtcaggatggggctccaggacctccaggtatcccaggatgcaatggaacaaagggagaa
cgtggctaccctggcagttcaggtttcccaggtttacaaggcccccctggtccccctggc
ctaatagggatgaagggggagccaggcgagatactgacatctttgcagccaggacaaaag
ggtgaaccaggatttccaggtctaccaggactaccaggccccgcaggtcccattggagca
cagggccctattggtcctcctgggcccccaggtttgctgggtcctcccggccccccagga
ctaccaggtcctaagggcaacatgggcttgaacttccaagggccaaaaggagaaaagggt
gagcagggactccaaggccccccaggacccccaggacagcttggcgaacagaaaagaaca
aatgatgtagagtttcagaaaggtgatcagggcgttccaggtgaccgaggccccataggt
ccccctgggctaccaggtcctcctggtcttcccggtggcggaaaaggtgaaaaaggtgag
caaggagaaccaggcaaaaggggaaaacctggcaaggacggagaatctggtcagcctggc
ttgcctggtttgcctggaggccgtggtatacctggttttccaggaagagatggagagaaa
ggcagtaaaggtgacgctggtcctcctggtcctcctggacatgcaattctaaggccagat
actggagcaacggtgggaccaaaaggtagtaaagggttgccaggaattcctggagacaaa
ggagaacgtggatatccaggccaacaggggccacctggcctcccaggttcaccaggaatt
ccaagtgttggctctcctggtactcctggttttcccggtgagagaggacagaagggggat
caaggccttcctggaatcccaataccagggccacctggaaatgatggacaaccaggctca
cctggcccccctggtccccctggcccccctggaactaccattcctcccattgacagactc
tgtgagcgaggaccccctggcttcccaggactcccaggagaacaaggatttatgggggag
agaggtcagaaaggtgataaaggagacacctgttttaactgcattggaattggcacttca
ggccctccaggggagaagggagtaccaggtttacctggaagcccaggttctcctggtttt
ccggggctgaaaggtgataaaggagtccctggccttgttggtactgttgggccacaaggt
cttcccggccctcctggccctcctggacgtcccggcacaaaaggcgatccaggtgatgtt
cttgctttccctggattgaaaggcgagaaggggaaccctggcttcccaggccctccaggt
ctgcctgggttagatggatctcgtggacaagatggactgccgggtcttcctgggcccaag
ggggagccaggtggcatcagtttcaaaggggacaggggacttcctggtgatccaggaatt
cctggtattcctggtgatcgagggcctccaggatctcctggatttggcccacaaggtccc
ccaggccagaagggtattcagggtgtttctgggcgctcaggagcccctggaggtccaggg
cccaaaggggaacctggacaaactatcacagaagcaggatctccaggtaaccctggcccc
ccaggcagagatggtgaagttggccttccaggtgatcctggccagccaggggcacctgga
ttgccaggcatcccaggctcaaaaggggatccaggactacctggtattggacttccaggc
ccaccaggacccaaaggatatcctgggttgccaggccttcctggtgtaccaggaaaccct
ggaagagcaggtcaagatggacctcctgggcttcctggattagcaggacagaagggggac
cgtggttttggtgttccaggaccagctggaccacctgggccaccgggtttcaaaggagca
caaggtcccaaaggggattccggctttccaggaacccctggccttccaggacgtataggt
tttgatggaactccagggcctaaaggtgacccggggccacgtggtcaacctgggttagca
ggacctccggggattccagggattggtggccaaggcccacctggagctccagggcctcca
ggacctgtgggtccaccaggttcatcaggattacagggcataccaggtgaaaaaggagat
cctggttcaccaggatttgacattcccggtcctccaggagataggggcagtcaaggattt
cctggatcacccggtctcccagggcctccaggttcacctgggccacttggacgagatgga
cttccaggaattccaggtaacaaaggcgatatgggagtgatgggtgcacctggtccccaa
ggttcccctggaacctcaggcaggaatggccttcctggcctgaaaggcaatgatggatta
ccaggccagcctggtcgtccaggaccagcagggcaaaaaggcagcaaaggtgagacaggc
ctgcgtggacttccaggaacaattgatccagcgcagctgggctctaaaggagaaaaagga
gaaccaggatctcctggtattcccggtttaacagggcagaagggctacccaggcacccca
ggtgacgcagggactcctggactagttggacagccagggatacctggactaccaggcccg
aagggagactcgggatttcctgggccaccaggaccaactggacctcctggacagaaaggt
gccagtggtgaaatgggacttccaggtcctccaggccaaaaaggtttccaaggcatagca
gggcgtcctggccagcctgggtctcctgggtttcctgggctgaagggagacaagggtgat
ccaggcctatcagacatcggtattccagggccccctggccctaagggtgaccctggtttg
cctggatatacaggtagtcctggcaacaaaggttctcctggcaatcctgggctacctggt
ttagcaggcagtccaggtacaaaaggtgatgccggcctccctggattcccaggtacacca
ggtattccaggaccaaaaggtattgatggacccccaggtaatccaggtgttccagggtca
cctgggcctccaggtgacattggccaccctggccctcccggccttgtaggggagaaagga
cagcctggacgagatggcattcctggaccagcaggacagaaaggcgaaccaggtcaacca
ggttttggacgccccggacctcctggactcccaggactctcaggtcaaaagggtgactca
ggtttacctggaccctcaggacctccaggagcccctggtctgaagggagaaacaggtggt
ccaggattccgtggccttccaggttcccctggctctccagggctgccaggaccaccttca
gaagggcctaagggaagccctgggcaaccaggcataccagggaggccaggtgccacaggt
cctccaggtcttcctggttcagaaggcccccgtggaccccccgggactggaggagtaaga
ggagaaaagggaaaccctggccagccaggtcagcccggagtgcctggtttgaaaggagac
caaggacaacctggacgcccgggtgattctggtcgtcctggtctgaatggaatgaaagga
gatcctggtgttccaggagttccaggattcccaggcatgaaggggcccctgggaccttca
ggaccaccaggccttggaggagaccctggactccctggatctccaggtcctccagggata
cctggtccagctggacaaacaattattgtaaaaggtgacccaggcccaccaggtcctcca
gggcagcctggaatgaaaggtctacctggactatcaggccctccaggattaccaggccca
atcggtcttcctggtgatcctggacgagatgggcttcctggatttgatggaccaggagga
cgtaaaggagagagaggacttccaggtcaacaaggtcagcgaggctcgcaggggccccca
ggtcccgatggactgcagggcccccctggtcttcctgggactgcttcagttgctcacgga
ttcctcataactcgccacagccagacaacagacacgccgttctgcccacaaggaaccacc
cagatttacaatggattttctcttctctacgtgcaggggaatgagagagcccacgggcag
gacttgggcactgctggaagctgcctccgccgtttcagcacaatgcccttcatgttctgc
aacatcaacaatgtctgtaattttgcatctcggaacgactattcctactggctctccacc
ccagagccaatgccaatgagcatggagcctttaaccggaaagaacatccaacccttcatt
agccgctgcactgtctgtgaagctcctgccatggttatagcgatccacagccagaccatt
caaatcccaccttgtccacaaggctgggactcgctatggattggttattcttttatgatg
cataccagtgcgggggcagagggatctggacaggcattggcctctcctggttcctgcctg
gaagaattccgttccgctcctttcattgagtgtcatggtcgagggacctgcaactattat
gctaattcatacagtttctggctggcaactgtggaagtggcagaaatgtttagtaaacct
cagtcggagactcttaaagctggagacctgaggacgcgcattagtcgatgccaagtttgt
atgaagaggacgtaa
DBGET
integrated database retrieval system
