Zootoca vivipara (common lizard): 118078744
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Entry
118078744 CDS
T07275
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118078744 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118078744 (SMARCC2)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118078744 (SMARCC2)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118078744 (SMARCC2)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118078744 (SMARCC2)
PBAF complex
118078744 (SMARCC2)
GBAF(ncBAF) complex
118078744 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118078744
NCBI-ProteinID:
XP_034958633
LinkDB
All DBs
Position
LG2:8666523..8697280
Genome browser
AA seq
1275 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDSARIWLSKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIYLHPDVDPKLQSKLKDIVKRHQGTVTEDKNNASHIVFP
VPGSLEEEEWVRPIMKRDKQVLLHWGYYPDSYDTWIPASEIEAPVEDAPTPERPRKVHGK
WILDTDTFNEWMNEEDYEVNDEKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMADLDEPEDENMETAGKDEEENNAGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQSRQSDSDTKAGRKSKEIEDLVTETVKGKPELQTTASQQMLNFPDKSKEKP
PDMQNFGLRTDMYTKKNAPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDELE
RIGEGGERGAFRASSREAPSMDLAQCAVGTKKGAETQETRAGLASGLELTINRLAQEESC
TDENRAEPPLSEEKKEVKEPREGALEEEVKEKLGEVPRKEEEKSKEADSEKEMDKSDGDT
MADGEKEKEPKDGSEEGPKDLAEAEAERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQAFHME
QLKYAEMRARQQHFQQMHQQQQQQPPPPPLSVGTQPLPSSGAPLAPAAHSMPIAQASVPA
TSTVGQPSSLAPAEQIGQPVAAQPQPAATGAPQTGPGQTGQPSAGSHAQPPFPSQQPSSQ
NLPGAVPATVHPAMAGNIPSALPFGMPASIPFSMASNVTDSIGINFPANTPIHPVHGNLA
CSMANPPIVNIASTLHPPATPLPHGSAAAQSPAIVAAMQGSLLSNAGAGSDQGPSLQPDP
IAPSPSTATPVPPTQ
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggatggcggccccaacgtcaagtactacgaggcctcggacacc
gttagccagttcgacagcgcgcgcatctggctcagcaagaactacaagaagtacatccaa
gcagagccacctaccaataagtcgttgtccagcctagtagtacagctgctgcagttccaa
gaggaggtgtttggaaaacatgtcagcaatgcaccactcacaaagttaccgataaaatgc
ttcttagatttcaaagctggtggtgccctatgccacatccttgcagcagcctataaattc
aagagtgatcaaggatggcggcgtttcgatttccagaatccatcacggatggaccgcaat
gtggagatgttcatgacgatcgaaaaatctctggtgcagaacaattgtctctcccgacct
aacatctatttgcatccagatgttgaccctaaattgcagtccaagctgaaagacattgtg
aaacggcaccagggaacagtaacagaagataagaacaatgcttcccatattgtcttccct
gtccctggtagccttgaagaagaagagtgggttcgcccgatcatgaagagagacaaacag
gtcctcctgcactggggctactaccctgacagctatgacacctggataccagcaagtgaa
attgaggcccccgtggaggacgcacccacaccagagagaccccgtaaggttcatggcaaa
tggatcctggacacagacactttcaatgagtggatgaatgaagaagactacgaagtaaat
gatgagaagagccccgtctcccgcaggaagaaaatctctgccaagactctcactgatgag
gttaacagtcctgactcagaccggcgggataagaagggaggaaactataagaaaaggaag
cgttctccctctccttcacctactccagaagcaaaaaagaagaatgccaagaaagggcct
tccactccctacaccaaatccaagcgtggccaccgtgaagaggagcaagaagacctcact
aaagacatggatgagccttctcctgtccctaatgtggaagaagtcacactaccaaaaaca
gttaacaccaagaaagactctgaatcagctcctgtgaagggtggcaccatggccgatttg
gatgagccagaagatgagaacatggagactgcaggcaaggatgaagaggagaacaatgct
ggaaacaaaggagagcagaccaagaaccccgacctacatgaagacaatgtcaccgaacag
acgcatcacatcatcattcccagctacgcagcctggtttgactataacagtgtccatgct
attgagcggagagccctcccagaatttttcaatggcaaaaacaagtcaaagactcctgaa
atctacttggcataccgcaatttcatgattgacacataccggctcaatccacaggaatac
ctaacctcgactgcctgccgtcggaacctggctggagatgtgtgtgccatcatgagagtc
cacgccttcctggaacaatggggactcattaattaccaagtggatgcagagagccggccg
acacccatgggaccaccacctacatctcatttccatgttctggctgacaccccttcggga
ttggtgccactgcagcccaaaacaccccagagtcgtcagagcgatagtgataccaaggct
ggacgaaagagcaaggagattgaagaccttgtcactgagacggtgaaggggaaacctgag
ctgcaaaccacagcttcccagcagatgctgaacttccctgacaagagcaaggagaagcca
ccagacatgcaaaactttgggcttcgcactgacatgtacaccaagaagaatgctccttcc
aagagcaaagctgctgccagtgctactcgtgagtggacagagcaggagacgctgctgctg
ctggaggctctggagatgtacaaggatgactggaacaaagtttctgagcacgttggcagc
cgcacgcaggatgagtgcattctgcatttcctgcgtcttcctatcgaggacccttacctg
gaggactctgaggcctctcttgggcctctggcctatcaacccattcccttcagccagtcg
ggcaaccccgtgatgagcaccgtggccttcttggcttctgttgtggaccctcgtgtggca
tctgcagcagccaagtcagcccttgaggagttctccaagatgaaggaggaggtccccaca
gccttggttgaagctcatgtccgcaaggtggaggaagctgccaaggtgacaggcaaggca
gacccagcatttggcctggagagcagcggaattgcagggaccacatccgatgagctggag
cgaataggtgaggggggcgagcggggcgccttccgcgcttcatcccgtgaagcgccctcg
atggacctcgcccagtgtgcggtggggactaagaagggtgccgagacgcaggagaccaga
gccggcctggcttccggcctggagctcacaatcaatcgcctggcacaggaagagagctgc
acagatgagaaccgggcagaacctccattatcagaagagaagaaagaggtgaaggaacca
agagaaggcgccctggaggaggaagtgaaggagaaacttggagaggtgcccaggaaagag
gaggagaaaagcaaagaggctgacagcgagaaggagatggacaagagtgacggggacacc
atggctgatggggaaaaggaaaaagaacccaaggatggcagtgaagaagggcccaaggat
ctggccgaggccgaggcggagcgtaaaaccaaagtggagagggacataggcgagggtaat
ctttctacggcggcggcggcagctttggcagcagcagcagtgaaagcaaagcacttggca
gctgtggaagagcgtaagatcaagtcgctggttgccttgctggtggagacacagatgaag
aagcttgagatcaagctaaggcacttcgaggagctggagaccatcatggaccgggagcgc
gaggcactagagtaccagaggcagcagctcctggctgaccgacaggccttccacatggag
cagctcaagtatgccgagatgcgcgctcgccagcaacatttccagcagatgcaccaacag
cagcagcagcagccaccgccaccgcctctctctgtgggcacacagcccctcccttcttca
ggggctcctctggcaccagccgcacactccatgcccatcgcccaggcttctgtgccggcc
accagcaccgtagggcagcccagcagtttggctccagcagaacagattgggcagccagtg
gctgctcagccacagcccgcagctactggagctccacaaacagggccaggtcagactgga
cagccttctgcaggttctcatgcccagcctccgttccccagccagcagccatcctcccag
aatctccctggggcagtcccagcaaccgttcaccctgccatggctggtaatatcccctcg
gctctgcctttcggaatgcctgcctccatcccatttagcatggctagtaacgtaacagac
tccatcggcattaacttccctgctaacacgcccatccatccagtgcatggtaaccttgcg
tgcagcatggctaatccgcccatcgtcaacatcgctagcaccctgcaccctcctgccacc
ccactgcctcacggttctgcagctgcccagagccctgctatcgtggcagccatgcagggc
agcctcctttcaaacgctggtgctggatcagatcaagggccttcacttcagccggatccc
atcgctcccagtcccagcacggccacaccagtcccacccacacagtga
DBGET
integrated database retrieval system
