Zootoca vivipara (common lizard): 118079567
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Entry
118079567 CDS
T07275
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118079567
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118079567
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118079567
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118079567
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
TRIM_CC
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-RING_2
ANCHR-like_BBOX
zf-RING_5
zf-B_box
Tsp45I
DPC3
Motif
Other DBs
NCBI-GeneID:
118079567
NCBI-ProteinID:
XP_034959729
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All DBs
Position
LG2:complement(15632351..15650982)
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AA seq
640 aa
AA seq
DB search
MAQLLRAPSAPCLVGLEEELTCSICLCVFESPVTTPCGHNFCLPCLEMTWSGLLRNFCCP
QCRSSFDSRPELKKNTVLCRVVEQFQSTQGEPAGKKKGLGDATTTTTSSSSSRPSVACDS
CLEKVADKTCLTCMASFCPEHLRPHQESPAFKGHQLVPPVKDLQSRKCQTHQKLLEFYCK
EHNSCICCFCLVTHKACATVPLQEAKEEKESQLKQRLTELYALSEKALQSLDQVRVQQKQ
TSDTANRKLDLLKAEFLEIIALIEEEEKEAVKTVLAEEKRVRDKYEYVYKVLGKKKTEIQ
GARDQIEVTLTEDDDITFLKKAAKLRQLPIKDVFIPKLELDQNLIHTVYQKAFGLKENVK
QFLSQPQEMKKEGAAQWKPKPFVQPGAKIAAARAAKRDEPPSASSQEKKTEEDAAAADTK
FQKXTGKRTQSPSQRARSSSRPQAAIPSITLESFLSKSREELLEFATKFTLDFNTAHKKV
LLSERNTKISVSETPQNYAQHPQRFTYCSQVVAFQCFKRGIHYWEVELEHNTFCGVGVCY
GSMARQGAESRLGRNSSSWCIEWFNSRISAWHNDVEKCLPNTKLKKIGILLNYDGGFVIF
FGVGEKLILLYKFRAQFTEALYPAFWVFSSGATISLCQLK
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctcagctgctgcgggcgccttcggccccttgcctggtgggcttggaagaggagctg
acgtgctccatctgcctgtgcgtcttcgagagccccgtgacgaccccgtgcggccacaac
ttctgcctgccatgcctggagatgacgtggtcgggcttgctgaggaacttctgctgcccg
cagtgcaggagctccttcgacagtcgccccgagctgaagaaaaacacggtcctgtgcagg
gtggtggagcagttccagagcacccaaggagagccagccgggaagaagaagggccttgga
gatgccaccaccaccaccaccagcagcagcagcagccgcccttcggtggcctgtgacagt
tgcctggaaaaggtggccgacaagacctgcctcacctgcatggcctccttctgcccggag
cacctgcggccacaccaggagagccctgccttcaagggccaccagctggtcccaccagtg
aaggacctccagagccggaagtgccagacccaccagaagctactggagttctactgcaag
gagcacaacagctgcatctgctgcttctgcttggtcacgcacaaggcgtgcgccaccgtc
cccttgcaagaggccaaggaggagaaggagtcccaactgaagcagagactaacggaactc
tatgctctgagcgagaaggctttgcagtccttggaccaagtgcgagtgcagcagaagcaa
accagtgatacagctaatcggaagttggacttgctgaaggcagaattcctggaaattatt
gctttaattgaagaggaagaaaaagaagctgtgaagacagtcctagcggaggagaaaaga
gtccgtgataaatacgaatatgtctataaagtcttgggtaagaagaaaacggaaatccag
ggagcgagagaccagattgaagtgaccttaacagaggatgacgacattacattcttaaag
aaggcagcaaaactccggcagttacccatcaaagatgtcttcatacctaaactagaattg
gatcaaaacttaatacacaccgtttatcaaaaagcctttggcctcaaagaaaacgtgaag
cagttcttgtctcaaccccaggagatgaaaaaagaaggagccgcacaatggaaaccaaag
ccttttgtgcagccaggggcgaaaattgctgcagccagagcagcaaagagagacgagccc
ccatcagcatcttcacaggagaagaagacagaagaggatgcagctgctgcagacactaaa
tttcagaaatagactggaaagagaacacaaagtcccagccagagagcacgaagttctagc
aggcctcaagcagcgattccatcgataactctggaaagcttcttatctaaatcccgagag
gagcttttggaatttgcgacaaaattcactctggatttcaacaccgcccacaagaaagtg
ctgctctccgagaggaacaccaagatatccgtgtcggaaaccccccagaattacgcccag
caccctcagcgcttcacctactgctcccaggtggtggccttccagtgtttcaagcgaggc
atccattactgggaagtggagctggagcacaacactttctgcggggtcggcgtctgctac
gggagcatggcaaggcagggggcggagagccgcctggggcgtaacagcagctcatggtgc
atcgagtggttcaactccaggatctcagcctggcacaatgatgtcgagaagtgcctgccc
aacaccaagctgaagaagattggcattttgctgaattacgatggtggcttcgtcattttc
ttcggcgtcggtgagaaactcatcctcctctacaagttccgggcacagttcacggaagct
ctctatccagcgttctgggtcttctccagcggggccactatctcgctctgccagctgaag
tga
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integrated database retrieval system
