Zootoca vivipara (common lizard): 118079626
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Entry
118079626 CDS
T07275
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118079626 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118079626 (DDX5)
03009 Ribosome biogenesis [BR:
zvi03009
]
118079626 (DDX5)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118079626 (DDX5)
Spliceosome [BR:
zvi03041
]
Complex A
U1 snRNP components
U1 related factors
118079626 (DDX5)
Complex B
118079626 (DDX5)
Ribosome biogenesis [BR:
zvi03009
]
Eukaryotic type
Pre-60S particles
Helicases
118079626 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
118079626
NCBI-ProteinID:
XP_034959870
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All DBs
Position
LG2:complement(18330399..18337190)
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AA seq
601 aa
AA seq
DB search
MPGYSSERDRGFGGPRFGGSRGGSLGGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VARRPMQEIEQYRAGKEITVKGHNCPKPVMNFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYGRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEHVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GRWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSE
DYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGSGRS
RGDRRDRYSAGKRGGFGFRERENFERTYGAVGKRDFGAKAQNGGYGAQGFGNGTAFGNNF
GGAGMQGGFRAGTPAYQNGYDQQYGNNMANMHGAMNQQQYAYPATGTTPMIGYPMPANYT
Q
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggtattccagtgagagggaccgcgggtttggtggccctcgttttggaggaagt
cgagggggatctttaggtgggaagaagtttgggaaccctggagaaaagcttacaaagaaa
aaatggaatctagatgagcttcctaaatttgagaagaacttctaccaggaacaccctgat
gttgccagacgtcctatgcaagagattgaacaatacagagcaggcaaagagatcacagtt
aaaggccacaattgtccaaaaccagttatgaatttctatgaagctaactttcctgcaaac
gttatggaagttattcagagacagaactttacggaaccaactgctattcaggcacaaggt
tggcctgttgccttgagtggactggatatggttggcgtagcacaaactggatcggggaaa
acactgtcttatttgttgcctgccatagtacacattaaccatcagccattcctagaacga
ggagatgggcccatttgtttggtgctggcaccaactcgagagctggctcagcaggtgcag
caagtggctgcagaatatggcagagcctgccgtttgaagtctacttgcatttatggaggt
gctcctaagggaccacaaatacgtgacctggaaagaggtgtggagatttgcattgcaaca
cccggtaggctcatagacttcttggaagctggaaaaaccaatctccggcgatgcacttac
ctcgttcttgatgaagctgacagaatgcttgatatgggatttgagccccagattcgaaaa
attgtagaccagattagacctgacaggcagactctgatgtggagtgcaacatggcccaaa
gaagttaggcagcttgcagaagacttcttaaaagaacatgtacacatcaacattggcgca
ttggaactaagtgcaaaccacaatattctgcagatagtggatgtatgtcatgatgtagag
aaagatgataagcttattcggttgatggaagaaataatgagcgagaaagaaaacaaaact
attgtctttgtggagaccaaaagaagatgtgatgatcttactagaaaaatgaggagagat
ggcaggtggccagcaatgggtatccatggtgacaaaagtcaacaggagcgcgactgggtt
ctaaatgaattcaaacacggaaaggctcctatcctgattgctacagatgttgcctccaga
ggtctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctctgag
gactatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacaca
ttctttacacctaacaatataaagcaagtaagcgacctcatctctgtacttcgtgaagca
aatcaggcaatcaacccaaaattgctccagttggttgaagacagaggttcaggtcgttcc
agaggtgaccgacgtgacagatactctgcgggcaaaagaggtggatttggttttagagag
agggaaaactttgaaagaacctatggtgcagtgggcaagagagacttcggtgcaaaagct
cagaatggtggctatggtgctcaaggttttggtaatggaactgcctttggaaacaacttt
ggaggagctggcatgcagggtggatttagagctggcactccagcttatcagaatggttat
gatcagcagtatgggaataacatggcaaacatgcacggtgcaatgaaccagcagcagtac
gcataccctgcaactggcaccacgccaatgataggttatccaatgccagcaaactatacc
caataa
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