Zootoca vivipara (common lizard): 118079918
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Entry
118079918 CDS
T07275
Symbol
CDRT1
Name
(RefSeq) CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118079918 (CDRT1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
118079918 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_SCAP
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
F-box-like
Beta-prop_Vps41
Beta-prop_DCAF12
F-box
Motif
Other DBs
NCBI-GeneID:
118079918
NCBI-ProteinID:
XP_034960561
LinkDB
All DBs
Position
LG2:complement(35817098..35837270)
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AA seq
1087 aa
AA seq
DB search
MKTRPVVQVAPQNLEIKLEYSPDLRCEKQTDLVPVCYKCKSCILSWKALSTREWFVRASQ
ISKGQFLKGIIKRFQSQDLLRYAWNFLQSTNSKDFTYSRSCVSSSFKASSTLDRALNPKK
LEHAMEDLWNWFLDASFWSKANYLLLLLQMCDSQLLLMAANLISILLSQDEATCKLADNK
TDEDQTSKDVIPLKKQEKSISQVQSHLTSHTSGLTSRIGSEKSDLFGRLRLHRFWSKESD
HMSDLISEDMDEAASSSIILNVAEPVPTHPTKPFKINKFKDFIRCLPIHLSKFILRMLDM
KSLNRCAQVSAHWDFLVKLIKKDMISKRTLQSEIAFLQGSCPKAANSNYAKIVNVIIPRI
NSEGDIIRCKSKLITPAKENEYLRKAYHGQEVDTVKLEERNVFCSGYNVRILMDSLDPNR
VIHYGGGKLMATGSMDRKVRLMDVNEMRFVPPVFLGHAGSIRAVHLNEQKGLLLSGSYDL
SIRMWNILTGACVKIFNGHTASITCLDLYKSKFVSGSKDCTAKMWDIETGKCIKTFSHKA
IVWAAKMNETHVVSACDKGVVKVWHAETCVLIKTLQGHLGPVTCLSFDEWHLVTGSNDGY
ILGWSMLGNHKRCLGAFRHPMEVLSLEFIYLRVISGCADGKIRIFNFLTGICLRVLRANS
RADPVVSFCIVENKLLVNALGSVVLFQFEEVVWDHTLGSEQQISGKRKERSKYDDKASQI
MPSHLLSGRKKRSQRNKWKLYNTNTVFTYDIQPKSFPSFLALRYQMLTVPPPRMRENVVT
LEMKPDEQTRLFSIAEHSKSITTLPLASNFALGQNGDVFVKHIKKKRSHGPLSGDQILLT
VSTMQHAYQTDQVSANMAYNMQIKDAWGPAFLQKRLPRKTPAAPKPEQQKMDPASQLKRL
KAARYTLGMEKISIPYETKTLQLSLKNSLLGSRVNSCIPPPTITRSKSCSNLARGGNISR
QAKMPSPPTMGHVVGHFTSSVESIKVARMKIAQPDRDMIPRPPKLYFTHTPNPYRLNSGF
RLLTTQQMKEYEEAKVNEYQAQKTKVIANREKECKNAWLRKIKGLPIDDFNKEGKVAAPE
LGENVFI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccgcccggtggtgcaagtggctccacagaacctggaaattaaactagagtac
tctccagatctgcggtgtgagaagcaaacagacttggtgcctgtttgctataaatgcaaa
tcctgcatcttgtcctggaaggctctctccacccgagagtggtttgtgcgggccagccag
atttctaaggggcaatttttgaaggggatcataaaacggttccaaagccaagacctcttg
aggtatgcctggaacttcctgcagtccaccaatagcaaggatttcacctacagccgttcc
tgcgtcagctccagcttcaaggcatcttccaccttggaccgggcacttaatccgaagaaa
ctggagcatgcaatggaagacctctggaactggttcttagatgccagtttctggagcaaa
gcaaactacctcttgcttctgctgcagatgtgcgactcacagttgttgctgatggctgcc
aacctgattagcatcctcttgagccaagatgaggccacttgcaaattggcggacaacaaa
acagatgaagatcaaacaagcaaggatgtgattcctctcaagaagcaagagaaatctatc
tcccaggttcagagccacctcacatctcacacctctggtttgacctcacggattggttca
gagaagagtgacttgtttggtcgtctacgtttgcacaggttttggagcaaagagtcagat
catatgtctgacctgatctcagaggacatggatgaagccgccagcagttctatcatactg
aatgtcgcggagcctgtacccacccatcccacaaagcccttcaaaatcaacaagttcaaa
gacttcattcgatgtctgcccatccacttgtccaagttcatattgcgaatgctggacatg
aaatccttgaatagatgcgcccaagtgagtgcacactgggacttcctagtcaaactaatc
aagaaggatatgatatcaaagcgtactcttcaaagtgagattgcattcctgcaggggtca
tgccctaaagcagcaaattccaactatgccaaaattgtcaatgttatcattcctcgcata
aactctgaaggtgacatcatccgatgcaagagcaagctaataacacctgcaaaggagaac
gaatacctgcgcaaagcttatcatggacaagaggtagatactgtcaagttggaagaacgg
aatgtcttctgcagtgggtataatgtccggattctaatggacagtttggatccaaacaga
gtgattcactatggtggtgggaagctgatggccactggttctatggaccggaaagtccgt
ttgatggatgtgaatgagatgcgctttgtccctcctgtctttctgggacatgctggtagc
atccgggctgtgcacctcaatgaacagaaaggattgcttctgagtggcagctatgatctc
agcatcagaatgtggaatatcctcactggggcatgtgtgaaaatttttaatggtcacacg
gcaagcatcacttgcttggatttgtataagagcaagtttgtgtctggatccaaagactgc
acagcaaaaatgtgggatatagaaactggaaagtgcattaagactttctcacacaaagct
attgtttgggctgctaagatgaatgaaacacatgtcgtgagtgcctgcgataagggcgta
gtgaaagtgtggcatgctgagacatgtgtactgataaagactttacaagggcatctgggc
cctgtgacgtgcctgtcgtttgatgagtggcatcttgtgacaggaagcaatgacggctat
atcctgggatggagcatgctgggaaatcacaagagatgcctgggggctttcagacacccc
atggaggttctgtccctggaatttatctatctcagagtcatcagtggctgtgcggatggg
aagatacgcatattcaacttcctgacggggatctgcctgagagttttgagagccaatagc
agagctgaccctgtggtgtccttctgtatagtagaaaacaagctactggtcaatgcactg
ggcagtgtggttttgttccagtttgaggaagtagtttgggaccacacactaggttccgaa
caacaaattagcggtaaaaggaaagaaaggagcaaatatgatgacaaagcatcgcaaata
atgccatcccatttactgtctgggcggaagaaacggtcccaaaggaataaatggaagctt
tacaacaccaatacagtatttacctatgacattcagccaaaatcattcccttcttttcta
gctcttcgttatcaaatgttgacggtacctcctcccaggatgcgcgaaaatgtggtaacc
ctggaaatgaagccagatgagcagactagactcttttctattgccgagcattcaaaatct
ataacaactctacccttagccagcaactttgcattgggccagaatggtgatgttttcgta
aagcacataaagaagaagcgttcccatggtcccctgtctggtgaccagatacttctcacc
gttagcacaatgcagcatgcctaccagacagatcaggtcagtgccaacatggcctacaat
atgcaaatcaaagatgcctgggggcctgcctttctccagaaaagattgcccagaaagacc
cctgctgccccaaaaccagagcaacagaaaatggatccagcaagccagctgaaacgactc
aaggctgcccgttacacgctcggcatggaaaagatttccataccttatgaaaccaaaaca
ctgcagctcagcttaaaaaactccttgcttggaagcagggtgaactcctgcatcccaccc
cccactattacgcgttccaaatcatgcagcaacttggccagagggggaaatatttctcgc
caggcaaagatgccatctccacctaccatggggcatgtcgttggtcactttacgagctct
gtcgaatccatcaaagtggcccgaatgaagattgcccaacctgatagagacatgatacca
aggccaccaaaactctacttcacccacaccccaaacccataccggctcaattctggtttc
cggcttttgacaacccaacagatgaaagagtatgaagaagctaaggtgaacgagtatcag
gcacagaagaccaaggttatagcaaacagagaaaaagagtgtaaaaatgcctggctaagg
aaaattaaaggtcttcccattgatgatttcaacaaggagggcaaagttgcagctcctgaa
cttggagagaatgttttcatctga
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integrated database retrieval system
