Zootoca vivipara (common lizard): 118080043
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Entry
118080043 CDS
T07275
Symbol
RBM15B
Name
(RefSeq) putative RNA-binding protein 15B
KO
K13190
RNA-binding protein 15
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118080043 (RBM15B)
03041 Spliceosome [BR:
zvi03041
]
118080043 (RBM15B)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
118080043 (RBM15B)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118080043 (RBM15B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
118080043
NCBI-ProteinID:
XP_034960866
LinkDB
All DBs
Position
LG2:68494925..68500470
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AA seq
923 aa
AA seq
DB search
MKRASERDSSPAGSGGTRGASSAKRPRERERESGGASGGSSSRRGPHRSSGASSSSSSAS
ASASSRSGRDKAAAGGSSSRSHRGEERPGGDSNHRGAASSSARSSSSSSQAASAAAPPPP
SSSSSSSSSRALGAAKAKVPLAAVVAPSLLLGGPSAVAAPSLLLAPGLGLTAGVGLAGDP
PGSSEYKTLLVSGLGPALPDQLLEDGLFRQFQRFASGGASDISVKLSHTPELGRVAYVNF
RHPADARDARRHARARQLLLYDRPLKVEPVYLRGGRRSRTPPPTPSPEPMAFLPPIHGVY
PYKQRSLSPVATPLLREPRPRHAAAAAFALEAVALGLSRERERVLDYYGLYDERGRPYGY
PIVAEEDLKPEDDQRATRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAY
AFLKFQNLDMAHRAKVAMSGRVVGRNPIKIGYGKANPTTRLWVGGLGPSTSLAALAREFD
RFGSIRTIDYVKGDSFAYIQYESLDAAQAACAQMRGFPLGGPDRRLRVDFAKAEEARYPQ
QYQPAPLPVPYELLPEGYSRHRSLEQDLRVRDRTPPHLLYSDRERGFLEADWTSPVKNAE
RRNNLETYSQSARSRSGERWGSDSDRSVLKPWEERRKRRSLSSDRGRTAHSPYEDRGRTK
PGGPALDRSPERARKENHTTESATEKEQNNSLQNNRHASEEKPHRETSDLQPKKRDSERN
HRTAEAESKTHEESKSETKKLKSLSDYAHTLQLAWNGLLVLKNSCFPTSMHILEGDLGVI
NGLLKDHLSGGKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQTAQGASTEG
AVPVVEPGLQRRLLRNLVSYLKQKQAAGVISLPVGGAKGKDSTGMLYAFPPCEFSQQYLQ
SALRTLGKLEEEHMVIVIVKDTA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggcgagcgagcgggattccagcccggcggggtccggggggacgcggggcgcc
tcctcggccaagaggccccgcgagcgggagcgcgagagcggcggcgccagcggcggaagc
agcagccggcggggcccgcaccggagctcgggcgcctcctcctcgtcgtcgtccgcctcc
gcctccgcctcatcgcgcagcggccgggacaaggcggcggcgggaggctccagctcgcgc
agccaccgcggggaagaacggcccggaggcgactccaatcaccgcggcgccgcctcgtcc
agcgctaggagcagcagcagcagcagccaagccgcctccgccgcggcaccgccgcccccg
tcctcctcctcgtcgtcgtcttcttcgcgggcgctgggggccgccaaggccaaagtgcct
ctggccgccgtggtcgccccatctttgctgctgggcgggccttcggcggtggccgcgccg
tcactgcttttggcgccggggctcggactgacggccggggtggggctggccggggatccc
cccggctccagcgagtacaagaccctgttggtgagcggcctgggcccggccctcccggac
cagcttctggaggatgggctgttccgccagttccagaggttcgctagcggcggcgccagt
gacattagcgtcaagctctcccatacccccgagctcggccgcgttgcctatgtcaacttc
aggcacccggcggacgcccgagatgctcgaaggcatgccagagcccgacagcttctcctc
tacgatcgccccctcaaggtggagcctgtgtacctgcgagggggcagacgaagccgcacg
cccccacctaccccgtcccctgaacccatggctttcctgcccccaatccatggtgtttat
ccttataaacagagatctctttctcctgttgccacccctttgctgagagagcccagacca
cgacatgctgccgctgcagcctttgccttggaagctgttgccttgggtctctctcgggag
cgggagagagtgctggattactatggactgtacgacgagcgcggccgtccctatggctat
cccatagtggctgaagaggatcttaagccagaggatgatcaaagagcgactcgtaatctc
tttattggcaatctggaccacagcgtctctgaggtagaactgaggcgtgcttttgaaaaa
tatggcatcattgaggaagtggtgatcaagcgccctgcaaggggccaaggtggagcctat
gcctttctaaagttccagaatctggacatggcacatcgagccaaggttgccatgtctggc
cgggttgttggcaggaaccctatcaaaattgggtatgggaaagccaaccccacaacccga
ctttgggtgggtggtcttggtccaagtacttccctagctgcccttgctagggaatttgat
cgctttggaagcattaggactattgactatgtgaaaggggacagttttgcctacattcaa
tatgaaagtttagacgctgcccaggctgcctgtgcacaaatgaggggcttccctttgggt
gggccagacaggagacttcgagtggattttgccaaagctgaggaggcacgctaccctcag
cagtatcaacctgcaccactgcctgtaccctatgaattgctacctgaaggctacagcagg
cacaggagtctagagcaagacttaagggtgagagacaggactcctcctcatctcctctac
tcagaccgggaaaggggctttttagaggctgattggaccagccctgtcaaaaatgcagag
cgcagaaataatttggagacctacagtcagtccgcacgcagccgaagtggagaacgctgg
ggcagcgatagtgaccgaagcgtgctcaaaccatgggaggaaaggcgtaaacgccgtagc
ctttccagtgaccgaggtagaactgcccattcgccatatgaggacagaggcaggacaaaa
cctggtgggccagctttagatcgcagcccagagagggctcggaaggagaaccacaccaca
gagtctgccacggagaaagagcagaataactccctgcagaacaaccgccatgcatcagag
gagaagcctcaccgtgaaacatctgatcttcagcctaagaaaagggacagcgaacgcaat
catcgaactgctgaggctgaatcaaagactcatgaagagtccaaatctgaaacaaagaaa
ttaaaaagcttatcagattatgcccacacgctgcagcttgcctggaatgggctacttgtc
ctgaaaaacagctgcttccctacatctatgcacatccttgaaggcgacttgggggttatc
aatgggcttctgaaagaccacttgtctggtggaaagctcacgcagctcaagattgcccag
agacttcggcttgaccagcccaagctggatgaagtaactcgacgtatcaagcaaggaagc
cctaatggctatgctgtgctgctggctacccagactgctcaaggagcaagcactgaaggg
gccgtccctgtggtagagcctggcttgcaaagacggcttctcaggaatctggtctcttac
ttgaaacaaaaacaggctgctggggtgatcagccttcctgtgggaggggcgaagggtaaa
gacagcacaggcatgctttatgctttccctccttgtgaattctctcagcagtacctccag
tccgcactaagaacattgggaaagttagaagaagagcatatggtgatagtgatagtcaaa
gacactgcctag
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