Zootoca vivipara (common lizard): 118080211
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Entry
118080211 CDS
T07275
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118080211 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118080211 (RAG1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118080211 (RAG1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118080211 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
118080211
NCBI-ProteinID:
XP_034961484
LinkDB
All DBs
Position
LG1:complement(52888862..52892005)
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AA seq
1047 aa
AA seq
DB search
MEMRPPPSMNLCFVSEQLQPPSMKFSEWKFKLFKVRSLSKPLPEDGHLAHSDKGKEAASL
DNVTEEQAEVMTSVSQEPSETVTEVNSTVQARDKNASPVNQSEIETHQTKLQHLCRICGG
SFKTDPYKRSHPVHGPVDDEMQALLRKKEKRATSWPDLLAKVFKIDVRGDIDTIHPTNFC
HNCWNVVQRKFSNSPCEEYFPRNGTMEWHPHSPSCEVCGTSFRGVKRKKQALNPQMSKKL
RIAAGRARKIRRVRSTKRVNNKALMKKIANCNKIHLSTKILAVDYPVDFVKSISCQVCEH
ILADPVETTCRHLFCRVCILKCLKVMGSYCPACRYPCFPTDLVSPVKSFLSILNSLAVRC
PVKGCHEEVLLGKYCHHLSIHKEVEDKEGYVYVNKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFAEKEEGGDVKSVCLTLFLLALRARNEHRQADELEAMMQGKGSGLHPAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRTAEKSLLPGYHPFEWKPPLKNVSSNTEVG
IIDGLSGIQRLVDDYPVDTIAKRFRYDAALVSALMDMEEDIMEGLKTKDLDDYLKGPFTV
VIKESCDGMGDVSEKHGCGPPVPEKAVRFSFTLMSITVAHDKGSSNIFEESKPNSELCCK
PLCLMLADESDHETLTAILSPLVAEREAMKNSVLILDMAGIPRMFKFVFRGTGYDEKLVR
EVEGLEASGSTYICTLCDATRQEASQNLILHSITRSHTENLERYEVWRSNPFHETVEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQFEIGEVYKNPDTSKEERKRWQSTL
DKLLRKKMNLKPMTRMNGNFARKLMTKETVEAVCELIKCDERQEALRELMDLYLKMKPVW
RSSCPTKECPELVCQYSFHSQRFAELLSTKFSYRYEGRITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKHLQKFMNAHNMLKSQG
FTLNPEQSMGDFMTLEDSLETTDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggagatgcggccaccaccaagcatgaacttgtgctttgtgtcggagcagctccagccg
ccctctatgaagttttctgaatggaaattcaagctgttcaaagtgagatcacttagcaaa
ccgcttcctgaagacggtcacctggctcacagtgataaaggaaaagaggcagcctctctg
gacaatgtcaccgaggagcaggctgaggtgatgacttcagtgtcacaagaaccttctgaa
acagtcacggaagtcaacagcactgtgcaggcaagagataaaaatgcctcccccgtgaac
caaagcgagattgaaactcaccaaacgaaactgcagcacctctgtcgcatctgtggaggc
tcatttaagactgacccttacaagcgaagccacccagttcatgggccagtggatgatgag
atgcaagcccttctaagaaagaaggagaaaagggccacatcctggccagatcttcttgct
aaggttttcaagatagacgtgagaggagacattgacacaatccatcctactaatttttgc
cacaactgctggaatgttgttcaaaggaaattcagcaattctccatgtgaagagtatttc
ccaaggaatggcaccatggaatggcatccccattcaccaagctgcgaggtgtgtggcact
tccttccgcggggtcaaaagaaagaagcaagccctgaatccacagatgagcaaaaagctc
aggatcgcagctggacgtgctagaaaaataaggcgcgtaaggagtacgaaacgagtgaac
aacaaggctttaatgaaaaagattgccaactgcaacaagatacacctcagtaccaagatc
cttgctgtagattatcctgtggactttgtaaaatcgatctcttgtcaggtctgtgagcat
atcctggctgatccagtagaaacgacgtgtcggcacttattctgcagagtctgcatcctt
aaatgcctcaaagtgatgggaagttattgcccagcctgtcgctatccttgctttccaaca
gatctggtgagccctgttaaatccttcttgagtatcctcaacagtttggctgtgagatgt
ccagtgaaagggtgtcatgaggaggtcctcctgggaaaatactgccaccatctttccatc
cacaaagaggtagaagacaaagagggctatgtgtatgtaaacaaaggtggccggccaaga
caacacttactttcattgacccggagagcacaaaagcaccgcctaagagaactcaagctt
caagtgaaagcttttgctgaaaaagaagaagggggagatgtaaagtctgtgtgtctaact
ttgttcctactggctctgagagcgagaaatgaacatagacaagctgatgaattggaagct
atgatgcaagggaagggatcaggccttcacccagctgtttgcttggcaattcgggtcaac
acctttctcagctgtagccaataccataaaatgtacagaactgtaaaagcaataacagga
aggcagatatttcagccattgcatgccctccgaactgctgaaaagtctctcctcccaggt
taccatccatttgagtggaagccacccttgaaaaatgtgtccagtaacacagaagtaggc
attattgatgggctgtcaggcatacagcgtttggttgatgactacccagtggacacaatt
gccaagagatttcgatatgatgcagctttggtttctgccctgatggatatggaagaagac
atcatggaagggctgaaaactaaggacttggatgactatttaaaaggccctttcacagtg
gtgattaaagagtcctgtgatggaatgggagatgtcagtgaaaagcacggctgtggccca
ccggtccccgagaaagcagttcggttctctttcacactcatgagcatcacagtagctcat
gacaagggaagctccaatatctttgaagaaagcaagcccaattcagaattgtgttgcaaa
cctttgtgcctcatgctggctgacgaatcagatcatgagacactcacagccatactgagc
cctcttgtggcagaaagagaggccatgaaaaatagtgtattgatacttgatatggccggg
atccccagaatgttcaaatttgtctttcggggcactggatatgatgaaaagcttgtccgt
gaagtagagggccttgaagcctctggctcgacttacatttgcacactttgtgatgcaaca
cgccaggaggcatctcagaacttgatcctccattccataacgagaagtcatactgagaac
ctagagcgatatgaggtgtggaggtcaaaccctttccacgagactgtggaagaacttcgt
gacagagtgaagggtgtttctgccaagccttttattgagactgttccttcgatagatgca
ttgcactgtgacattggcaacgcagccgagttctacaaaatattccagtttgagattggc
gaagtatacaaaaaccctgacacatccaaagaagagagaaagaggtggcaatcaactctt
gataagctccttagaaagaaaatgaacttaaagcccatgacaaggatgaatggaaatttt
gcaagaaagctcatgaccaaagagactgtggaagcagtttgtgaattaataaagtgtgat
gagagacaggaagcccttagagaactcatggacctttacctcaagatgaagccagtatgg
cggtcctcatgtcccaccaaggaatgcccagaacttgtttgccagtacagcttccattct
caacgtttcgcagagttgctatccacaaaattcagttacagatatgagggaaggatcaca
aattactttcataaaacgctggctcatgttcctgaaattatcgaaagagatggctccatt
ggtgcttgggcaagtgagggcaatgaatctgggaacaagctattcaggcgctttcgaaaa
atgaatgccaggcaatcaaaatgctatgaaatggaggatgtcttgaagcaccattggctg
tacacctcaaaacatttgcagaagttcatgaatgctcataatatgctgaaaagccagggg
ttcacattaaatccagagcagagtatgggagatttcatgacactggaagactcattagaa
actaccgattccatggaattctaa
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