Zootoca vivipara (common lizard): 118081233
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Entry
118081233 CDS
T07275
Name
(RefSeq) nuclear pore glycoprotein p62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118081233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118081233
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118081233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Nup188_C
Motif
Other DBs
NCBI-GeneID:
118081233
NCBI-ProteinID:
XP_034963484
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Position
LG2:complement(117373101..117391957)
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AA seq
581 aa
AA seq
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MSQFNFGTPGTPGGGFSFGTPKTAASTAPAGFSFSSATTGGGFSFGTATQNTANTQPAGL
FSFATPATSAQTSGFSFGTPATSAPAAAGNVFTLGGNAPKLNLSNTNTTQSAGITGALGL
GSGGLGTSTPSSTPASQPVAPPGFVFGSNTATQPATTGGFSFGGMGATQAAAPSFSLGSI
GNTTQQAAPAPTGLAFGVPASAAGPTTTTVSTAQPAVAFGLGAQTTAPVSGFGVLTSTPA
TSASTGTLGQGPALSFGAKLGAGTAATSTAPSTTAVNSILGMSGPTLFASIASSSAPASS
AAGLSLGVTSTGTAPAGTLGFGAKAPGTTATAPTATVTAVGGAPAATSITSTPSTGFMLN
LKPLSTTATVASASTAATTTVTAPPSMTYAQLESLVNKWSLELEDQEKHFLQQATQVNAW
DRKLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLMPLEESVKEQSGTV
YLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLNTSGGPADTSDPLQQICKILNAH
MDSLQWIDQNSALLQRKVEEVTKVCESRRKEQERSFRITFE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcaactttggcactcctggcactcctggaggaggcttcagcttcgggact
ccaaaaaccgcagccagcacagcccccgctgggttctccttctcttccgccaccacaggg
ggaggcttcagttttgggacagctactcaaaacacagcaaacacccagcctgcaggcctg
ttctctttcgctaccccagcaacatcggcacagacctctggattcagcttcggcacacct
gccacgtcggcaccagctgctgctggaaatgtgttcacactggggggaaatgcccccaag
ctgaacttgagcaacaccaacaccacacaatcagctggcattacgggggcgcttgggctc
ggcagcggcggactggggacatccacgcccagtagcactcccgccagccagccagtggct
cctcccggctttgtgttcggctccaacaccgctacccagcctgccacaaccggaggcttc
agctttggaggcatgggagcaacgcaggctgcggcccccagcttcagccttggctccata
gggaatacaacgcagcaagcagcacccgcccccactggcttagcgttcggagttcctgca
tccgcggccggccctactacaaccacggtatccacagcccagccagctgtggcgtttggc
cttggggcgcagacaacagctccagtttcaggctttggggtactgacgtcaacacctgcc
acctctgcctccacaggaacgctcggtcaggggccagccttgtcctttggagcgaaactt
ggagcaggtacagcagcaacttccacggcgccttccaccacagctgtgaactccatcctc
gggatgtccgggccgacgttgtttgcatccattgcaagctcttccgcgccagcctcgtct
gctgctggtctctcacttggtgtaacctcaacagggacggcacctgctgggactttaggg
tttggcgcaaaagcccctgggacaacagcaacagcacccacggccacagtgactgcagtg
ggaggagcccccgcagcaaccagtatcacctccaccccaagtacgggattcatgctgaac
ctgaagcctctgtccaccactgctacggtggcctccgcgtccactgcggccaccacaaca
gtcacggctcccccgtcaatgacctacgcccagctggagagcctggttaacaagtggagc
ttggagctggaggaccaggagaagcacttcctgcagcaagccacccaggtcaacgcctgg
gacaggaaactgatcgaaaacggggagaagatcacgtctctgcaccgagaagtggaaaaa
gtgaaactggatcagaaaaggttggaccaagaactagatttcattttgtcccagcaaaag
gagctggaggacttgctgatgcctctggaagagtccgtaaaggagcagagtgggaccgtc
tacttacaacatgcagatgaggaacgggagaagacgtacaaactggcagagaacattgat
gctcagctgaagcgcatggcccaagatctgaaagatattattgagcacctgaacacctct
ggaggccctgctgacaccagtgacccacttcaacagatctgcaagattctgaatgcgcac
atggactccctccagtggattgatcagaattcagccctgctgcaaaggaaagtagaggaa
gtgaccaaggtttgcgaaagccgccgcaaggaacaggagcgcagcttccggattacgttt
gagtga
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