Zootoca vivipara (common lizard): 118081560
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Entry
118081560 CDS
T07275
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118081560 (TRAIP)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118081560 (TRAIP)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118081560 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_4
zf-RING_11
zf-RING_Vps41
Vps5
WEMBL
Zn_ribbon_8
OVT1
Laminin_II
zf_RING_Vps8
zf-RING-like
RINGv
DUF1664
APG6_N
CENP-F_leu_zip
KASH_CCD
GAS
zf-RING_16
FANCL_C
RKP_N
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
118081560
NCBI-ProteinID:
XP_034963947
LinkDB
All DBs
Position
LG2:complement(65573357..65602056)
Genome browser
AA seq
470 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAIHCGHTFHHLCLLQWFDTAPSRTCPQCRIQVGKRHIIN
KLFFDVALEEQTGLDAESLQNELDRMKAQLAMKEKEKRDIQTIVNSLRETLDLRNASIES
LQKSVTQMTMLCATLKKQMKYLEQQQDDAKSAKEEARRLRNRLKTLEGIETLLQSQHPEV
EKMIREMGTGQAAVEQLAVYCISLKKEYENLKESQKASNDTKEKLRKELFSANHKLQKTV
LELEKTTEEVKSTQTDLRNADNEIMSLKKKIRMMQDTIKVSSLSNEALGRLVSESPAPLE
LLSPKLHRPAHSDEIDLNDTFDVQTPKNATFDVQTPKHPPHKTISAPAKKLKLDKKFAPV
TSLSRVLKETVESCSADTDDEHLEDLLPAFIRNSVMSKRPPASNMVVPQRNTGIVRTGYD
GLGGRTKFIQPSISTEIRPLALRCKKRSVCKQPTAAVSGISQTKLDNFLK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgcccattgtaccatctgctcagatttctttgataatgagagggatgtg
gcagctattcactgcggacatactttccaccatttatgcctcctccagtggtttgacaca
gcaccaagtcggacttgtccacaatgcagaatccaggttggcaaaagacacataatcaac
aaactgttctttgatgttgccctggaggaacagacaggactggatgcagaaagtctacag
aatgaactggataggatgaaagcccagttagccatgaaagagaaggagaaacgggatatc
caaacaattgtgaattcactaagggagaccctggatttgcgtaatgcctccattgaatca
ctccagaaatctgtgactcagatgacaatgttgtgtgctactctcaagaaacaaatgaag
tatctggagcaacagcaagatgatgcgaagagtgcaaaagaggaggcccgaaggctgaga
aacagactgaaaacattggaggggattgagacactgctgcaaagtcaacatcccgaggtg
gaaaagatgatccgcgaaatgggaacaggtcaggctgcagtggaacagcttgctgtctat
tgtatctcactgaaaaaggaatatgaaaatctgaaggagtctcagaaagcatcaaacgat
acaaaagagaagctgaggaaggagttgttttctgctaatcacaagttacagaagacagtt
ctagagttggagaaaacaacagaagaggtgaagagcacccagacagatctgagaaatgca
gataatgagataatgagtttgaaaaagaagataaggatgatgcaagataccattaaagtg
tcatcattaagcaatgaagcacttggccgccttgtctctgaaagccctgctcctctagaa
ttgctaagcccaaagctccatcgaccagctcacagtgatgagattgacctcaatgatact
tttgatgtacagacaccaaagaatgctacctttgacgtacagacaccaaagcatccacct
cacaagaccatctctgctcctgcaaaaaaacttaaactggataaaaagtttgcacctgtg
acaagtttatcgagagttctcaaagaaacagtggagagctgctcagctgacacagatgat
gagcatctggaagatcttctacctgctttcattagaaactctgttatgtccaagaggccc
cccgcaagcaacatggttgtaccacagaggaacacgggaatagtgagaactgggtatgat
ggcttaggaggcagaaccaaattcattcagcctagtatatcaacagagattcgccccctg
gctttgaggtgcaagaaaagaagtgtttgtaagcaaccaacagcagctgtttctggcatc
agtcagactaaactagacaacttccttaagtaa
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