Zootoca vivipara (common lizard): 118081875
Help
Entry
118081875 CDS
T07275
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118081875 (TARBP1)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118081875 (TARBP1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
118081875 (TARBP1)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
118081875 (TARBP1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118081875 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
118081875
NCBI-ProteinID:
XP_034964313
LinkDB
All DBs
Position
LG3:43815344..43847304
Genome browser
AA seq
1598 aa
AA seq
DB search
MDAVLADALLSQCPDWGALLRAVCGGGAEGGPLSVEQAETLRFLLERVAAAGGRSDERDA
AARRVAWEAALGRCLPVLLGGASSPGESPEERLRLARAACGALRCCASFCGAPLAERLAR
ESLEALEGSAGSGRLQVEAAAEVLAAVAPWLEEPVLLERAVAAALKLLRGDGEDEEEEKG
LLAAGRLLPALGRNSAALGLVWEGLMVLPPPPKGAPQRVSRTLLVLSALSDALFPASAHV
EAAAQLLDARQCSSFWEVVQKGLTESDALCRKRARYLLKRAVDVSDKLRLECRCNRHSGN
EPHLFWWCAEKNDQLTQFWENYILIMETLEGNQIHVIKPVLPKLNSLYEHAVSEQNDSWV
FHPSWHMCIYKRMFESENKTLTKEGVIHFLDIWQTKHIPMSPGFSEFIIGPLMDALSESS
LYSRLPGQIIGTCPPLGTKLQMFLATFFTSLPEKEKSSFLLKFIQKMSNRHWCAVPILFL
SMALANIPAYRVLDTKGLLALRDVLQCTMITHQILLRGAAQCYLLKAAILLTDVEKVSLS
DIANFIVSLKPEESLGRGTLLWTMLCNWLRVNDKHFRKPLNYNVLQDKTALSVYAQSLVE
DYLKTPIANAAEDCLMPDWFEAKLVATMILLAADVEEMKHVYSVNGSTERIELKALLNPL
LDVLLKLGTNPYISSLKTDKSLQLLLKLLQTCSIKCSSPQVDGIIAFLQNSFMTATESIL
DFLLRRLTANELNTISDLQRCHLYLEVLSELMNICSVSGWKKGPSICSFISSLINTCLCS
VQEGNSEKEVKLGEQIQKVVSMASLSVICEIIDQKPDLQLESLPAVETLKTTISCAQLNH
VLKKPCSMEKDSYLEEPASHQGWGKIVACYIHDQWVCLHFVLNNYQKLSKDKYIEHFLPD
AQKCTRILQSALEAVTILPSDHILPVFHSMKIVVSKLLETSESLCIEAFDLAWKIIFALS
NTQLIFWPNLKAFVQFVFDPEILAAAAKNKSQAYTRIKEIIFQMIEMSSTRTGVFNMLFT
HCCQSWLFPTSDNPNAVEKAFSNASNYSELVVEACLFGTVFRRDQRLVQEVCAFIENLGD
ECAANVVTESTNRDDHYVRVCAIKFLCLLDEANTLHKKFIEDFVMKLLDRGELMSKSKNR
YYVNSLQHRIKNRLWQTLLVLFPKLHKDILTRTIDRILQAGHSNNQASVKYLIEWNIILI
LHKFPHFLQKFWDCFNYGEDQLKTSICTFLAVMSHFDVILQNISEKTPALKKALVVVLQW
CFHHNFSVRLYALIALKKIWGMCKALCVEDFEALAPVIECSLNQAESMHGTGNAKKNWQR
IQKHFFFENFHPLKDYCVETIFYTLPRLSEIAEEELISLSKFKAFTDIPLSSTFPFSHSR
TSLLDLKQCDWSQQDLGLNSAEPSSQRQWTDVQKKIIPWKNSTPDLELVFQDRATKLGKA
NNKLIVVASLIDKPTNLGGLCRTCEIFGVSALIVGSLHYINDKQFQHLSVSAEQWLSLIE
VKPFQLADYLEQKKMEGYTIIGVEQTAKSCDLTEYCFPEKSLLLLGNEHEGIPANLIQQL
DTCVEIPQQGVIRSLNVHVSGALLIWEYIRQQIVKEKE
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggtcttagccgacgcgctgctctcgcaatgcccggactggggcgcgctgttg
cgggccgtgtgcggcggtggcgccgaaggcgggccgctctccgtcgagcaagcggagacg
ctgcgcttccttctcgagcgggtggcggcggcgggcgggcggagcgacgagcgggacgcg
gcggctcggcgcgtagcctgggaggcggcgctgggccgctgcctgccggtgctgctcggc
ggcgcctcctcgccgggggagtccccggaggagcggctgcgcctggccagagccgcgtgc
ggggcgctgcgctgctgcgcctcgttttgcggagcccctttggcggagcggctggcgcgg
gagtcgctggaggccctggaaggcagcgcggggagcgggcggttgcaggtggaagcggcc
gccgaggtcctggccgccgtggccccttggctggaggagccggtgctgctcgagcgagcc
gtggcggcggccctgaagctgctgaggggagatggagaggacgaggaggaggagaaaggc
ttgctggcggccgggaggctgctgccggcgctggggcggaatagcgccgcattggggctc
gtgtgggaagggctgatggtgctgccaccgccgcccaagggtgccccgcagcgggtgagc
cggaccctgttggtcttgagcgccctctcggacgcgctgttccccgcgagcgcgcatgtg
gaggcggctgctcagctactcgacgccaggcagtgcagcagtttctgggaagtggtgcaa
aaggggctgacggagagcgatgccctgtgcaggaaaagagcccgttatttgctgaagcga
gcagtggatgtctctgataaactacgcctggagtgcaggtgcaaccggcacagtggaaat
gaaccacatctgttctggtggtgtgcagaaaaaaatgatcaacttactcagttttgggaa
aattacatcttaataatggagactttggaaggaaatcagatacatgttataaagccagta
ttgccaaagttaaatagtttatatgaacatgcagtatcagagcaaaacgatagttgggtg
tttcacccatcatggcatatgtgcatttacaaaagaatgtttgagagtgaaaacaaaaca
ttgacaaaggaaggtgtaattcactttcttgacatctggcaaacgaaacatatccctatg
tcaccaggattttcagagtttattattggccctttaatggatgctctttcggaaagttct
ctctatagcaggttaccaggtcagattatcggaacctgtcctcctttaggaacgaagttg
caaatgttcttggctacctttttcacaagcctccctgagaaagaaaaaagtagttttttg
ttaaagtttatacagaagatgagcaataggcactggtgtgctgttccaattttgtttctg
tccatggcactggcaaatattccagcatatagagtactagataccaaaggactcctagct
ctgagagatgtcctgcagtgcaccatgatcacccatcagattctcctacggggagctgct
cagtgctatcttcttaaagcagctatactcttgacagatgtcgagaaagtgtccctttca
gatattgcaaacttcattgtatctctgaaaccagaagaatcgttaggcagagggactctt
ttgtggacaatgctttgtaattggttgcgtgtaaatgacaagcactttcgaaagccttta
aactacaatgtgcttcaagacaaaactgcattaagtgtttatgcacaatcccttgtggag
gattatctgaaaacacctatagccaatgctgcagaagactgccttatgcctgactggttt
gaagctaaacttgttgctacgatgattctgctggctgcagatgtggaagagatgaaacat
gtatacagtgtcaatggcagcacagaacggattgagctgaaggctctcttaaaccctcta
ctagatgtcttgttgaaacttggcactaatccctacatctcatcactgaaaaccgataaa
agcctacagctgctattgaagctactgcagacttgttcaatcaaatgttccagtccacaa
gttgatgggataatagcatttctacagaattcatttatgactgccacagaaagtattttg
gattttctcctcagaagacttacagcaaatgaattaaataccatttcagatctgcagcgc
tgtcatttatatctagaagtgttgtcagagctgatgaacatttgctcagtcagtggctgg
aaaaaaggaccatcgatctgcagcttcatctcctctctgataaatacctgtctctgcagt
gttcaagagggaaatagtgaaaaggaggtaaaacttggggaacagattcagaaggtagtg
agtatggcatcgctaagtgtgatttgtgaaattattgatcagaagccagatcttcagctt
gaatctctcccagctgttgaaaccctaaaaacaactatttcctgtgctcaacttaaccat
gtattaaagaagccttgcagtatggaaaaagatagttatcttgaagagccagcatctcat
caaggatggggaaaaattgtagcatgttatatacatgatcagtgggtttgtcttcatttt
gttctaaataattatcaaaagctttctaaggacaaatatatagagcactttttgccagat
gctcaaaaatgtacaagaattttacagtctgcactggaagcagtgacaattcttccttct
gatcatatattacctgtgtttcattccatgaaaatagtcgtttccaagcttttggaaacc
tctgaatctctgtgcatagaggcttttgacttagcatggaaaattatatttgctcttagt
aacacacagctgatcttttggcccaatctaaaagcttttgttcagtttgtgtttgatcct
gaaattcttgctgctgcagcaaagaacaagagtcaggcatacaccaggataaaagagatc
atatttcagatgattgaaatgtcttcaacaaggactggcgtctttaatatgttgtttact
cactgctgtcagtcttggctatttcctacttctgataacccgaatgctgttgaaaaggct
ttttcaaatgctagcaattacagtgaacttgtcgtagaggcctgtttatttggaactgtt
ttcaggcgtgatcaaagacttgttcaggaagtatgtgcttttatagaaaatcttggagat
gaatgtgcagcaaatgttgttacagaaagtacaaacagagatgaccattatgtgagagtt
tgtgccatcaaatttctgtgcttgctggatgaggcaaatacattgcacaagaagtttata
gaagacttcgtcatgaaactacttgataggggtgaactcatgtccaaatcaaaaaatcgc
tattatgtgaactccttacaacacagaattaaaaatcgactgtggcagacattgctagtt
ttgtttccgaaacttcataaggatattttaacaagaactattgacaggattctacaagct
ggacatagtaataatcaagcatcagtaaagtacttaatagaatggaatatcatattgatt
ctacataagtttccccattttcttcaaaagttttgggattgttttaactatggtgaagac
cagcttaaaacgagcatttgcacatttttagcagtgatgtcgcattttgacgtaattctc
caaaatatatctgagaagacaccagccttgaagaaagccctcgtcgttgttctacagtgg
tgtttccatcacaatttcagtgttcgactttatgctttaatcgcccttaagaaaatttgg
ggaatgtgcaaagcattgtgtgtggaagattttgaagctttagctccagttattgaatgt
agtctcaatcaagcagaaagcatgcatggaacagggaatgctaaaaagaattggcagcgc
atccaaaaacactttttctttgaaaactttcatccacttaaggattactgtgttgagaca
atattttacaccttgccgcgtctttcagaaattgcagaagaggaattgatttctctatct
aagtttaaagcattcacagacatcccactgagctcaacatttccattctctcattctcga
acttcacttcttgatctgaagcagtgtgactggtctcagcaagatttgggtttgaattca
gctgaaccaagcagccaaaggcaatggacagatgttcaaaaaaagataattccttggaag
aacagtactcctgatctggagcttgtgtttcaagatcgggctactaaacttggaaaagca
aacaataaactgattgtagtggcttcactcattgataaacctaccaatttaggaggcttg
tgtcgtacatgtgaaatatttggggtgtctgctctcattgttggcagccttcattatata
aatgacaagcagtttcagcacctcagtgtttctgctgaacaatggctttcccttattgag
gtaaagccattccagcttgctgattatttggagcaaaagaaaatggaaggctacactata
ataggagtagagcaaacggctaaaagttgtgatctgacagaatattgttttccagagaaa
tccctcttgctgctgggaaatgagcatgagggaatccctgcaaatctgattcagcagttg
gacacctgtgtagaaattcctcagcaaggagttatccggtcacttaatgtccatgtaagt
ggagctctgctcatttgggaatatataaggcaacagatcgtcaaggaaaaagaatga
DBGET
integrated database retrieval system
