KEGG   Zootoca vivipara (common lizard): 118082018
Entry
118082018         CDS       T07275                                 
Symbol
NUP43
Name
(RefSeq) nucleoporin Nup43 isoform X1
  KO
K14305  nuclear pore complex protein Nup43
Organism
zvi  Zootoca vivipara (common lizard)
Pathway
zvi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:zvi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118082018 (NUP43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zvi03019]
    118082018 (NUP43)
   03036 Chromosome and associated proteins [BR:zvi03036]
    118082018 (NUP43)
Messenger RNA biogenesis [BR:zvi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     118082018 (NUP43)
Chromosome and associated proteins [BR:zvi03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    118082018 (NUP43)
SSDB
Motif
Pfam: WDR55 WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz Beta-prop_EML WD40 Beta-prop_EML_2 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_Gbeta KNTC1_N WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_SCAP Beta-prop_HPS5 EIF3I WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 118082018
NCBI-ProteinID: XP_034964664
LinkDB
Position
LG3:55019169..55030744
AA seq 402 aa
MGWWPRRRMAGSQAFPRAIRVLNIDISRDVGHHHHVLGKTAKEGTSGDASHPTSAFPAIL
AIRKRKEKPKENKISIWSVGDFGSLTPNGEYNGEPHLLCDIEHSGDVMDMEFLDQERIVT
ASSTGSVTIFRHHQNNQTLSLNQKWKNAHYYDASGGSASCTGIICNSPEIFTVGEDGRIN
VFEVDHKEAKRTIDNADSSTLHAVTQLRTTEILTVNSIGQLKVWDFRQQGNEPSQIFSLT
GERVPLHCVDRHPSQQHIVATGSQDGMLSIWDVRQGGVPVSLLNAHDAELWEVHFHPSNP
DHLFTCSEDGTLWHWDVSTDISERKSFLHTGGRSTTTYLPHSAVNQSVTSAWLSNDPTKD
RMEITNLIPNPTLSVNSLDVLGSCLVYGTDAESIYVKKNLFA
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgggatggtggccaagaagaaggatggcagggagccaagccttccctcgtgccattagg
gtgctcaatattgacatatcacgagatgtggggcatcaccaccacgtcctgggaaaaacc
gccaaggaaggaacgtctggagatgcttcacatcccacctcagcatttcctgcaattcta
gctattagaaaacgaaaggaaaagccaaaggaaaataagatttcaatttggtctgttgga
gacttcggaagtttgaccccaaatggagaatataatggagaaccacatctgctatgtgat
attgaacacagtggtgatgttatggatatggagtttttggatcaggagagaattgtgact
gcttcatccactggaagtgtgaccatattcagacatcatcaaaataatcagactctgtct
ttaaaccagaaatggaaaaatgcacattactatgatgcatctggtggcagtgcatcatgc
actgggatcatatgcaacagtcctgaaatctttactgttggtgaagatggtaggataaat
gtgtttgaagttgaccataaggaagctaaacgtactatagataatgctgacagcagtaca
ctccatgcagttactcagcttcgcacaacagagatcctgacagtcaattccattggccag
ctaaaagtatgggatttcagacagcaaggaaatgagccttcacagatattttcattgaca
ggggaaagagttccattgcactgtgtggataggcatcctagtcagcagcacattgtagcc
acaggcagccaagatggaatgttgagtatttgggatgtaagacaaggtggcgtgccagtt
tccttgctaaatgctcatgacgcagaattatgggaagtccactttcatccttccaatcct
gatcatctgttcacttgttcagaagatggaactctgtggcactgggatgtttccactgac
atttctgaaagaaaatcattccttcacacaggtgggagaagtactactacatatctgcct
cacagtgcagttaatcaatctgtaacaagtgcctggctgagcaatgatcccactaaagac
cgcatggagatcacaaatttaattccaaatccaacattatctgtgaatagtttagatgtt
ttaggatcatgtcttgtatatggaactgatgcagaatctatttatgttaaaaaaaaccta
tttgcataa

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