Zootoca vivipara (common lizard): 118082031
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Entry
118082031 CDS
T07275
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118082031 (SHPRH)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118082031 (SHPRH)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118082031 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_12
FBPase
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
118082031
NCBI-ProteinID:
XP_034964698
LinkDB
All DBs
Position
LG3:56476870..56521448
Genome browser
AA seq
1690 aa
AA seq
DB search
MSGRRKRAPPSRMNDEKKKQLCWNMHDDRKNEVIDLDAVDEDQPLAGTSSSSTAHVINDD
STDEALTLKVNNLKSLSFSTILDEADDSCHLLTSISIQLNIVIFPYISDSNWKTLLGEFI
LQPLPGQQLTENVHKKSFTLMRAEPSDHLRICVHVKNVEKVDEREESLQNTYQEDVLVES
SLSNEMLEDLMWLQKKRVIVLCQRSGDGQCLKVGMYLLEVGLSKLEFLSDGGGRIKKANQ
LIQKLMEKFYHFIIPDILEEDEESDRDIERQNIEELYDYVRHTHQKEIQFLKENVQHSAL
IPVLRPYQTEAVNWMLQRENFKNVPTNVENALHFLWREFITLDGLKLYYNPFTGCIIRER
PVAGPQWPGGILADEMGLGKTVEVLSLILTHTRKDVKQDALMLPEGFLVNFFVPPQPSEG
SKKKSIKKMELKLKEKVHYPSLRVMLLTAIKEMNVKKGASIVAIFKYVHAIYKYDTRRNR
RILKRTLEKLIAEKIVEQVKGHGLAGSFKLGRNYKEKKLCSKFKKEKIKTSDRVQKKNSP
ENENETKELGDEGTCSPNGLKLSQAVDITAEEHDYCTRSKDNRKSELDPKGWIMEEDSLH
RTADLQENMLVSKNKMYSTDISKKDDEAEEQQDNSEGQPPASQEHTSIFVPHPGSIFPFN
TSDYRFECICGELGLVDYKARVQCLNCHLWQHAECVNYKKENLKIKPFYCPHCLVAMKPV
PTGATLIISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKHGFLQPHILAEQEVVITTYD
VLRSELNYVDIPHSNSEDGRRFRNQKRYMAIPSPLVAVEWWRICLDEAQMVECTTAKAAE
MALRLSGINRWCVSGTPVQRGLEDLYGLVLFLGADPYWVKYWWDQLLYRPYCRKNTQPLY
NFIAKIMWRSAKKDVIDQIQIPAQTEDTHWLYFSPVERHFYHRQHEVCCQDALAKLRKIS
DWSLKLSSLDRRTVASILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCR
TECEEVHRQLVCALNGLAGIHIIKGEYALAADMYREVLRSSEEHKEKLKTDSLQRLHSTH
NLMELLAGKHPGISPTLRDSRLQEECEQLRQHYMSKSNAEVSEAHQALQPVLQTIHELQK
KMRSNSPWWLDVIQSAIQYAIDEELVQRVQNDLTSNYKQQTNKLSMVDKFRDCRGLQYLL
TTQMEEVKKFQKRVREAVKKLEGPPSKEVIEAATICHLRPVRLPLNNCVFCKADELFTEY
ESKLFSHTVKGQMAIFEEMIEDEDGLVDDRLPTTSRGLWAASETERSLKAILSFAKAHRI
DAKAIEEGSIFLELFEAWKKEYKLLHEYWMVLRDHVSAIDELAMATERFRVRHPEEPKPN
HPVLHIIEPHEVEQNRVKLLNDKAVAKSQLQKKLGQLLYLTNLEKSQDKTTGGVNPEPCP
ICARQLGKQWAVLTCGHCFCNECIAIIIEQYSVGTRRSSIKCAICRQTTSHKEISYVFTA
EAANQEDDIPVKGSHSTKVEAVVRTLKKIQFKDPGAKSLVFSTWQDVLDIIAKALYDNSM
EFAQINGINKFQENLSSFKYDAKINILLLPLHTGSNGLNIIEATHVLLVEPILNPAHELQ
AIGRVHRIGQTKPTIVHRFLIKATIEERMQTMLKTVERSHSSSSMKQSEASVLTVADLAD
LFSAETEELE
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccgtcgaaagcgtgctcctccatcgaggatgaatgatgagaaaaagaagcag
ctctgctggaatatgcatgatgaccgtaaaaatgaagtgatagatttggatgcagtggat
gaagaccaacctcttgcaggtacaagctcatcttctacagcacatgttataaatgatgat
agcactgatgaagctttgacgctcaaagtaaacaacctaaaatcattgagcttctcaacc
attttggatgaagcagacgattcctgccatctcttgacttctatatccatacagctaaat
attgtgatatttccttatatttctgattctaactggaaaaccttgcttggggagttcatt
ctgcaacctcttcctggtcaacaattaactgagaatgtccataaaaagagttttacactg
atgagagcagaacctagtgatcatttgcgtatctgtgttcatgtgaagaacgttgagaag
gttgatgagagggaagaatcattacagaacacttaccaagaagacgtattagttgaatca
tctttaagtaatgaaatgttagaagacttgatgtggctgcaaaagaagagagtaattgta
ctttgtcaaagatccggagatggccagtgcttaaaggttggaatgtatctccttgaagtt
ggcttaagcaagctagaattccttagtgatggtggtggcagaataaaaaaagctaatcaa
ctcattcaaaaactgatggaaaaattctaccacttcataattccagatattctggaggaa
gatgaggaatccgatagagatatagagcggcaaaatattgaagagctttatgactatgtg
aggcatacacaccaaaaagaaattcagtttttgaaggagaacgtacagcactctgcactg
attcctgtattgaggccataccaaactgaggctgtaaactggatgctgcaacgtgagaac
ttcaaaaatgtaccaaccaatgtagaaaatgcactccacttcttatggagagagtttatt
actttagatggactaaaactgtactataatccttttactggctgcattattcgtgaacgc
ccagttgctgggcctcagtggcctggaggaatattggcagatgagatgggccttggaaaa
acagtagaagtattgtcccttatcctgacacacactcgaaaggatgttaaacaggatgct
ctgatgttacctgagggctttttggtaaacttctttgttccgcctcaacctagtgaagga
agcaaaaagaaaagcataaagaaaatggaacttaaattgaaggaaaaagtgcactatcct
agtttgcgagtgatgctcttaacagctataaaagaaatgaatgtgaagaagggagcatct
attgtagcaatttttaagtatgtccatgccatatacaagtacgacacacgcagaaaccgt
cgcattcttaaaaggactctggaaaaattaattgcagagaagatagtggaacaggtcaaa
ggtcatggtcttgctggttctttcaagctgggcagaaactacaaggaaaagaaattgtgt
agtaaatttaaaaaagagaaaataaaaacttcagatagggttcagaagaagaattcacca
gaaaatgagaatgaaaccaaagaattgggagatgagggcacatgctctccaaatggtctt
aaactatctcaggcagtagacatcacagcagaagagcatgattactgtacaagaagcaaa
gacaatagaaaatcagaactggatcctaagggctggataatggaagaagattctctacac
agaactgctgacttgcaagaaaatatgcttgtttcaaaaaacaaaatgtattctactgac
atttctaaaaaagatgatgaagctgaagagcaacaagacaactcagaagggcagcctcca
gcctctcaagaacacactagcatttttgtaccacatcctggttctatttttccattcaat
acctctgattatcgttttgaatgtatatgtggtgagcttggcttggttgactataaggca
cgtgtgcaatgcctgaactgccatctgtggcagcatgctgagtgtgtgaactacaaaaaa
gaaaatctaaagatcaagcccttttactgtccccattgccttgtagcaatgaaaccagtt
ccaacaggagctactctgataatctctccaagttctatctgccaccagtgggttgatgag
attaacaggcatgtgagatcatcttctcttcgagtgttggtttatcaaggagtgaagaag
catggtttcttgcagcctcacatcttggcagagcaggaagtagtgatcaccacatatgat
gtccttcgtagtgagctgaactatgtggacattcctcacagtaatagtgaagatggacgc
cgtttcaggaaccagaagcgttatatggctatcccaagtcccttggtagctgtggagtgg
tggagaatttgcctggatgaagcacagatggtggaatgtaccactgcaaaggctgcagaa
atggctctccgtttgagtggaatcaatcgctggtgtgtcagtggcacaccagtgcaacga
ggattggaagatttatatggattagtactgttccttggagctgatccttactgggtcaaa
tattggtgggatcagcttctgtatcgaccatactgcaggaaaaacacacagcctctctac
aacttcatagccaagataatgtggaggtcagcaaagaaggacgtgattgaccaaattcag
atccctgctcagacagaagatacacactggctctatttttctcctgtggagagacacttt
tatcatcgccaacatgaggtctgctgccaggatgctttggcaaaactcaggaagatttct
gattggtccctcaaacttagcagcttggatcggaggacagttgcttccattctgtaccct
ttgttgcgcttgaggcaggcctgctgtcacccacaagctgtacgtggagaattcctgcca
ctgcagaaaagcacaatgacaatggaggaacttctaacatcactacagaaaaaatgtcga
acagaatgtgaggaagtccataggcaactggtgtgtgctttgaatggattagctggtatt
catattattaaaggtgaatatgcattggcagcagatatgtatagagaggtgctgcgttcc
tctgaagagcacaaagagaaactcaaaacagattcattgcaaagacttcattctacgcac
aacctgatggagcttctggcaggaaagcatcctgggatatcacccactttgcgcgatagc
aggcttcaagaagagtgtgagcaactccgtcaacattatatgagtaaatcaaatgcagaa
gtttctgaagcccaccaggctttgcaaccagtactacagacaatccatgaactccagaag
aaaatgcgctccaattcaccttggtggttagatgtgatccagtcagcaatacaatatgct
attgatgaggagcttgttcaacgggtgcaaaatgatcttactagcaactacaaacaacaa
actaataaactctctatggtagacaagttccgtgactgcagaggccttcagtacctgctc
acaactcaaatggaagaagtgaagaaattccagaaacgtgtgagagaggctgtgaaaaaa
ctggagggtcctccttccaaagaggttatcgaggctgccactatctgccatctgcgccct
gtgaggttgcccctaaacaactgtgtcttctgtaaggctgatgaattgttcacagaatat
gagtcaaagctcttctcccatactgtaaaggggcagatggcaatctttgaagaaatgata
gaagatgaagacggtctggttgatgaccgcttacctaccacaagcagaggtctctgggca
gcaagtgaaactgagcgctctttgaaagctatactgtcttttgccaaagctcatcgaata
gatgccaaggcaattgaagagggcagcatcttcttggaactttttgaagcatggaaaaag
gaatataagctgcttcatgaatattggatggtcctccgagatcacgtgtctgccattgat
gagcttgccatggctacagaacggtttagagtgcgtcatccggaagagccaaaacccaac
caccctgttcttcacataattgagccgcatgaggtagaacaaaatcgagtgaaactcctt
aatgacaaagcagttgccaaatcacagcttcagaagaaactgggtcagcttctctacctt
actaatttggaaaagtctcaagataaaacaactggaggagtgaatccagagccatgtcca
atttgtgcacggcaactgggaaaacagtgggcagtgttgacatgtggacattgcttctgc
aatgagtgtatcgctattattatagaacagtacagtgttggcacccgcagaagttcaatc
aagtgtgccatctgcagacaaacaacatcacataaagaaatctcttatgtcttcactgca
gaggcagcaaatcaagaagatgatatacctgtgaagggaagtcactctaccaaagtggaa
gctgtggtcaggactctaaagaaaatccagttcaaagatccaggggccaaatccctagtt
ttctcaacgtggcaagatgtcctcgatatcattgcaaaagcgctatatgataatagcatg
gagtttgctcaaatcaatggaattaacaaatttcaggaaaatctatcttcatttaagtat
gatgccaagatcaacatattgttattgcctcttcatactggctcgaatggattgaatatt
attgaggcaacacacgtcctcctagtagaacctatcttgaatccagcacatgagctacag
gccattggcagagtgcatcgcattgggcaaactaagcccacaattgttcatagattctta
atcaaagcaacaattgaagaaagaatgcagacaatgctgaaaactgtagaaaggagccac
tctagttcttccatgaagcagtcggaggcctctgtgttaacagtagctgatctcgcagac
cttttctcagcagaaactgaagaacttgaatga
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integrated database retrieval system
