Zootoca vivipara (common lizard): 118082041
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Entry
118082041 CDS
T07275
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03013
Nucleocytoplasmic transport
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118082041 (PNN)
03015 mRNA surveillance pathway
118082041 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118082041 (PNN)
03041 Spliceosome [BR:
zvi03041
]
118082041 (PNN)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
118082041 (PNN)
Spliceosome [BR:
zvi03041
]
Complex C
Other components
EJC/TREX
118082041 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
118082041
NCBI-ProteinID:
XP_034964730
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All DBs
Position
LG1:complement(29257090..29268208)
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AA seq
690 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLTITGPGGGRGRGSIL
LRRGFSDSGGGPPAKQRDLEGATNRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNDHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLFDDSQKKLNALFENRRIEFAEQINKMEARPRRQSLKEKEHQEVQK
EEKKEDQKKEQEEGKAVQQVEEMETGNRSNDVEMEEVGEEKEVGASHSDGEIEQEEEEQK
EEMEVKVDEGPEIKENDRQQDNQEEDVVLGKEEGENTLPVDGEQDVMETNEADHAEPLEN
ENSKEVEPEMESNPQQEQEGPVAPLEKEEANKPEVEAEPEEAEEKEPESIAVSEAEAQPR
LEAVLQPQPSPQLESTQDQEPQVDKEETVVPENLPEIQADQIQAVTVEVKNKGRSRSRGR
ARNKGSKSRSRSTSSSTSSTSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRESSSSS
SSSESRSRSRGRGHNRDRKRRRSLDRKRRDNAGVDRSHKSSKGSSRDAKGSKDKSSRSDR
KRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgggctctgcaggagcagctcgagaaggccaaggagagcctcaag
cacgtcgacgagaacatccgcaagctcacggggcgggaccccaacgatgtgcggcccgct
caagggagattattgaccatcacaggccctggtggaggtagggggcgtggaagtatatta
cttaggcgtggattctcggatagcggaggaggacccccagccaaacagagggatctagaa
ggggcgaccaataggctagctggggaacgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaaaccagcgttgcagtcttctgttgttgctacctcc
aaagaaagaacacgccgagaccttattcaagatcaaaacatggatgaaaagggaaaacaa
aggaatcggcgcatatttggcctgttgatgggtactcttcagaagttcaaacaagaatca
acagtcgctactgagaggcaaaaaagacggcaagaaattgaacagaaacttgaagtgcag
gcagaggaagagagaaagcaggttgaaaatgagaggcgagagctctttgaggaaagacgt
gctaaacaaacagagctgcggctattggaacagaaagttgaacttgctcagctgcaagaa
gaatggaatgatcataatgccaaaataattaaatatataagaacaaagacaaagcctcat
ctgttctacatacctggcagaatgtgtcctgctacccagaagctgtttgatgattctcaa
aaaaaattaaatgcactgtttgaaaataggcgcattgagtttgctgagcaaattaacaaa
atggaagccaggcccaggcgacaatctctgaaggaaaaagaacaccaggaggtgcagaag
gaagaaaagaaggaagaccagaagaaggagcaagaagagggtaaggcggttcagcaggtg
gaagagatggagacaggtaatcggagcaatgatgtagaaatggaagaggtaggggaagaa
aaggaggtaggtgctagtcacagtgatggagagatagaacaggaggaggaggagcagaaa
gaggaaatggaggttaaggtagatgagggaccagagattaaggagaatgataggcagcag
gataatcaggaggaggatgttgtgttagggaaagaggaaggtgaaaatacgctgccagta
gatggcgagcaggatgtgatggaaaccaatgaggcagatcatgcagagccactagaaaat
gagaatagcaaagaagtggaaccagaaatggagagtaatcctcaacaagagcaggagggg
cctgttgctcccttggagaaagaggaagccaacaagccagaagtggaagctgaaccagag
gaggcagaagagaaggagccagaatccattgcagtgtccgaggctgaggcccagcctcga
ctagaggctgtgcttcagccacagccttcaccacagttggaatccactcaagatcaagag
cctcaggtagacaaagaagaaactgtagtgcctgagaatctgcctgaaattcaggcagac
caaatccaggcagtaactgtagaagtcaagaacaagggcaggagcaggagcagaggtaga
gcaaggaacaaaggcagtaagagtcgaagtcgcagtactagcagcagcaccagtagtact
agttctacaagcagtagtagcggcagtagttctagcagtggcagcagcagtagtcggagt
agttcctccagcagcagcagcactagcggaagtagtagtcgagagagtagcagtagttcc
agcagtagcgagagcagaagtcgaagcagagggcgtgggcacaatagggataggaagcgt
aggaggagtctggatcgaaagcgaagggataatgcaggagtagacaggagtcacaagtct
tcgaaaggtagcagcagagatgcgaaaggatcaaaggataaaagttcaaggtcggacaga
aagaggtctatatcagaaagtagtcggtcaggcaaaagaacttcgcggagcgaaagagac
cgtaaatcagacaggaaagacaaaaggcgttga
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integrated database retrieval system
