Zootoca vivipara (common lizard): 118082080
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Entry
118082080 CDS
T07275
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118082080 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118082080 (HBS1L)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118082080 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
118082080
NCBI-ProteinID:
XP_034964815
LinkDB
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Position
LG3:60280142..60326879
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AA seq
680 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDNPTAYAETLEEKYD
YETEHSNDCIPSHQLTGAEKAKLDLCLDRMREVLGKSVSEKVMVEAALSSKFDVQQALDS
VLAQDNKQNKIKNEDAVIAGKATKGKVRDSQTSRIESDVVPKVTKMTVSGKRQTTGFEVP
CVNAEENGHMPQKGLSAGDANVGVTEILPKPAVPPQTVQASEEPTLTPTSVKKSGKAKQQ
IDVKAELEKRQGGKHLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRIMHKYEQESKKAGK
ASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAMADV
AVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFREIVSK
LGQFLKQAGFKESDVAYIPTSGLGGENLVTRSQASELTKWYEGKCLLEQIDSFKPPQRSV
EKPFRLCVSDVFKDQGSGFCVTGKIEAGYVQVGDRLLVMPPNETCTVKGIALHDEPVDWA
AAGDHVILTLTGMDIIKINVACMFCCPKEPIKACTRFRARILIFNIEVPITKGFPVLLHF
QTASEPATIRRLLSVLHKSTGEVTKKKPKCLTKGQNALVELQTQRPVALELYKDFKELGR
FMLRYSGSTIAAGVVTEIKE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcacaggaacgtgcgtggctataactacgacgaagactttgaagatgatgat
ctttatggacagtctgtagaggatgattattgcatttcaccttcaacagctgctcaattc
atttactcaagacgcgataatcctactgcatatgccgagacattagaagaaaaatatgat
tatgaaacagaacatagcaatgattgtattccaagtcaccagctaacaggtgctgaaaaa
gctaagcttgatttgtgccttgatcgcatgagagaagtgcttggaaagtcggtgtctgag
aaagtgatggtggaagcagcattgagcagtaaatttgatgtacaacaagctttggattct
gtacttgcccaagacaataagcaaaataagatcaagaacgaggatgccgtaattgcaggg
aaggcaacaaaaggaaaagtaagagattcccagacaagcagaattgaatctgatgttgtg
ccaaaagttaccaaaatgactgtgtctggaaagagacaaactaccggctttgaagttcca
tgtgtgaatgctgaagaaaatgggcatatgccacagaagggactctcagctggagatgcc
aacgtgggggttactgagattctacctaaaccagctgttccaccccagactgttcaagca
tcagaagaaccaaccttgacaccaacttcagtgaaaaagtccggaaaagcaaaacagcaa
atagatgtgaaagctgagctggagaagagacaaggaggaaagcatctacttaaccttgtg
gtaataggacatgttgatgcggggaaaagtaccctcatgggtcatttgctgtatcttctg
ggcaatgtgaacaaacgaattatgcacaaatatgagcaagaatcaaagaaagctggaaag
gcatcatttgcttatgcatgggtcttggatgagacaggggaagagagagagaggggagtg
acaatggatgtaggtatgaccaaatttgagacaaagacaaaagttattacattgatggat
gctcctggccataaagacttcattccaaatatgatcacaggagctgcaatggctgatgtg
gctgtattagtggtggatgccagcagaggggagtttgaagcaggatttgagactggtggg
caaacacgagaacacggactgttggttcgatctcttggagtcacacagctggcagttgct
gtcaataaaatggaccaggtcaattggcaacaggaaagatttcgggagattgtcagtaag
cttgggcagttcctgaagcaagctggctttaaggagtcggacgtagcttatatccctaca
agtgggcttggtggtgaaaatcttgtcacaaggagtcaagcgagtgagctgaccaaatgg
tatgaaggaaaatgcttgttagaacaaatagattctttcaagccacctcaaagatcagtg
gagaaaccattcagactatgtgtatcggatgtttttaaagatcaaggatcaggattttgt
gtgactggtaaaattgaagcaggatatgttcaagttggagatcgactgctagtgatgcct
cctaatgaaacttgcactgtaaaaggaattgccctacatgatgaaccagtggattgggct
gcagcaggagatcacgttattctcactttgactggcatggatatcatcaaaatcaatgtt
gcgtgcatgttttgttgccccaaggaacctattaaagcttgcacacgtttcagagctcgg
atcctcatcttcaatattgaagttcctatcaccaaaggattccctgtgcttttacatttt
caaactgcaagtgagcctgccactattaggaggttattgagtgtgcttcacaagagtaca
ggtgaagtcacaaagaaaaagcctaagtgtctgactaaaggacagaatgctttagtagaa
ctgcaaacacaaaggcctgttgctctggaactttataaagacttcaaagaacttggaagg
ttcatgttacgctacagcggctccaccatagctgcaggagttgtcacggagataaaagaa
taa
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