Zootoca vivipara (common lizard): 118082219
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Entry
118082219 CDS
T07275
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zvi03000
]
118082219 (PRDM1)
Transcription factors [BR:
zvi03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118082219 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-C2HE
zf-met
STL11_N
B129_C2H2-zf
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
118082219
NCBI-ProteinID:
XP_034965198
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Position
LG3:complement(70608737..70698590)
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AA seq
767 aa
AA seq
DB search
MKMDMKDADMTLWTEAEFEDKCTYIVNDHPTEPSTEGCNVTQAESSLPRNLIFKYAGHGK
EVIGVISKDIIPKGTRFGPLVGEIYTNGTVPKDANRKYFWRIYSGGELLHFIDGFNEEKS
NWMRYVNPAHSVQEQNLAACQNGMDVYFYTIKPIPPGQELLVWYCRDFAERLHYPSTGDL
VMNITQSHVNPKQPANDKDELYLKTVPRREHSVKEILKTDSSNLKGKDLFYSHIYPHTQE
KDLEGLRKNCSPEKPFYPRIVYPIRPPIPEDYLKAYRIERPSYIAHSPIQSSTTPSPTAR
SSPDQSLKSSSPHSSPVTVSPLASMTQEHREPYPYLNGLYNSEGLGAYSGYAPSSHLPQA
FPYHKFLLPPYGMSINNFNLFPRMYPFYSSLLSGGSIPNHMLNSSPGLPSSLPSDGSRQL
LQPDHPRDFLIPAHNSAFSITGAAASMKDKPCSPTSGSPTAGTAATSEHIMQPKPTSAVL
AATSSEEAMNLIKSKRNMTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHS
GERPFKCTTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKP
YQCKLCTAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLKVHLKGNCPVVPEPTL
STEDLNRINEEIEKFDISDSADRLDDVEDNIDMASIVEKEILAVLKREMEGATLKASLQR
NLGNGLVSSGCNLYESSDMSIVKLPQGHPLPRVPIKVKQEAVEPMDP
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggacatgaaggatgctgacatgactctatggacagaggctgaatttgaagac
aagtgtacctacattgtaaatgatcaccccacggagcccagcacagaaggctgcaatgta
acccaggctgagtcttccttgccaaggaacttgattttcaaatatgcaggacatggcaaa
gaggttattggagttatcagcaaagacattatccccaaaggaacacgctttggacccctg
gttggtgaaatctataccaatggcacagttcctaaggatgcaaacagaaaatatttttgg
cggatatattctggtggtgagcttctccacttcattgatgggtttaatgaggaaaagagc
aattggatgcgttatgtaaacccagcacattctgttcaggagcagaacctggctgcttgt
cagaatggaatggatgtctacttttatactatcaaacccataccacctggccaggaattg
ctcgtgtggtactgccgggactttgcggaaaggttacactatccttccactggagacctg
gtgatgaatattacacaaagccatgttaatccaaagcagccagctaatgacaaagatgaa
ctttatctaaaaactgttcccagaagagagcacagtgtgaaggaaatcctgaaaactgat
tccagtaatctcaaaggaaaggacttattttatagccacatttatccacatactcaagaa
aaagacttggagggcttgagaaaaaattgtagtcctgaaaagcctttctatcctcgtatt
gtctacccaatccgaccgcccatccctgaagattacctgaaggcttataggattgagagg
ccaagttacattgcccactcacctatccagtcttctaccacaccgagccccacagcaaga
agtagtccagaccaaagtttgaaaagctcaagccctcacagcagcccagttacagtctca
cccctagcttctatgactcaagagcacagagaaccttatccttacttgaatggactctat
aactcagaaggattaggggcatattctgggtatgcaccttcaagccatctcccacaagcc
tttccctaccacaaatttttgttaccaccatatggcatgagcatcaacaatttcaacctc
tttccaaggatgtatcctttctacagcagcctactgagtggaggaagcatccccaatcat
atgctgaactcatctccaggacttccaagttccttgccatctgatggaagccgacagctg
ctgcaacctgaccatccaagggacttcctcatccctgcacataacagtgccttctctatc
acaggggcagctgccagcatgaaagacaagccatgtagcccaactagtggatcacccaca
gcaggcacagcagccacttcagaacacataatgcaacctaaacctacctcagcagtgttg
gctgccaccagcagtgaagaagccatgaatcttatcaagagcaagcgaaacatgactggt
tacaaaacccttccatacccactgaagaaacagaatgggaaaataaagtatgaatgcaat
gtctgctccaaaacctttggtcagctctctaatttgaaggttcaccttcgagtacacagc
ggagaaagaccattcaaatgtactacttgcaataaaggattcactcagctggctcacctc
caaaagcactatctggtacacacaggagaaaagccccatgaatgtcaggtctgccataag
cgattcagcagcacgagcaacctgaagacccacctgcggctacattctggagagaagcct
taccagtgcaagctttgcactgctaaatttacccagtttgtgcacttgaaactgcacaaa
cggctccataccagagagcgcccgcacaagtgtatccattgccacaagagctatatccac
ctttgcagcctcaaggtccacctgaaaggcaactgccctgttgtccctgaacctaccctt
tcgacagaggacctcaaccggatcaatgaagagattgagaaatttgacattagtgacagt
gcagacaggctggacgatgttgaggacaacattgacatggcatctatagtagaaaaagaa
atacttgctgtgcttaaacgagagatggaaggagctactcttaaagcatcactgcagagg
aacctgggcaatgggctggtttcctcaggatgtaacctttatgaatcgtcagatatgtca
attgtgaagttgcctcaaggtcatccactacctcgggtacctataaaggtcaagcaagaa
gcagttgaaccaatggacccttaa
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