Zootoca vivipara (common lizard): 118082373
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Entry
118082373 CDS
T07275
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zvi03041
]
118082373 (DDX1)
03016 Transfer RNA biogenesis [BR:
zvi03016
]
118082373 (DDX1)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118082373 (DDX1)
Spliceosome [BR:
zvi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
118082373 (DDX1)
Transfer RNA biogenesis [BR:
zvi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
118082373 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
118082373
NCBI-ProteinID:
XP_034965713
LinkDB
All DBs
Position
LG3:complement(88502242..88521567)
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGSAFAIGSDGLCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCRDQGLCRVGWSSLQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYADVDKGQITFSKNGKDLGLAFEIPQHLKNQALFAACVLKNAELKF
NFGEEDFKFPPKDGFVALDKAPEGNSVKSQHAGSAQVAQTKNQPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLT
LSQVRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKNDKYWEKIGKNHIRTDEVHAKDNTRPGTN
SAEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFVQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKADVRFLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHSCPSRGKGCYNTRLKDEGGCTIWYNEMQLLG
EVEEHLNCTISQVEPDIKVPVDDFDGKVTYGKRRAAGGGSYKGHVDILAPTVQELASLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggccttctcagagatgggtgtgatgccagaaattgctcaagctgtagaagagatg
gactggttgcttcctacagatatccaagcagagtccatcccgttaatcttgggaggtggt
gatgtacttatggctgcagaaactgggagtggaaaaactggtgcattcagcatcccagtt
attcagattgtttatgaaactcttaaggaccaacaggaaggcaaaaagggaaaaaccact
ataaaaactggtgggggagtgctcaacaaatggcaaatgaatccatatgacagaggatct
gcttttgctattgggtctgatggtctgtgctgccaaagcagggagataaaggaatggcat
ggatgccgatcaacgaaaggcgtgactaaagggaaatattattatgaagtatcctgtcgt
gaccagggtttatgcagagttgggtggtcctctttgcaagcgtcattagatttgggtact
gacaagtttggctttggctatggcggaactggaaagaaatctcataacaaacagtttgat
agttatggggaggaattcactatgcatgacacaatagggtgttatgcagatgttgataaa
gggcaaatcacattctccaaaaatggcaaggaccttggacttgcgtttgaaatcccacag
cacttaaagaaccaagcactctttgcagcctgtgtcctaaagaacgctgaattgaaattc
aacttcggcgaagaagactttaaatttccacccaaagacggcttcgttgctcttgataag
gctcccgagggtaactctgtaaaatcccagcatgcaggaagtgcacaagtagcacaaaca
aagaatcagccaaatgctcccaaagccttgattgtggagccttccagggaactggcagag
cagactctgaacaacgtgaaacaattcaaaaaatatgttgataatcctaaattaagggaa
ctcctaattattggtggagttgctgcaagagaacaactttctgtattggagcaaggggtg
gacatagttgtgggaactcctggaagactagatgatcttgtgtcaactggaaaactgact
ttatcgcaagttaggttcctggttcttgatgaggctgatggccttctcagccaggggtat
tcagatttcataaacagaattcattctcagattcctcagataacttcagacgggaagagg
ctgcaggtgattgtgtgctctgcaactctgcattcgtttgatgtgaagaaattatctgaa
aagatcatgcacttccccacttgggtagatttgaaaggagaggattctgtcccggataca
gtgcaccatgttgttgtccctgtaaatccgaaaaatgacaaatactgggaaaagattggt
aaaaaccacatcaggactgatgaggtgcatgcaaaggacaatacaagacctggtactaat
tctgcagagatgtggtcagaagcgattaagattttaaaaggagaatacactgtccgcgcc
attaaggaacacaagatggatcaagcaataatcttctgcagaaccaagatagattgcgat
aacatggagcaatactttgtgcagcaaggaggaggtccagataggaaaggacatcagttc
tcatgtgtctgcctgcatggtgacagaaagcctcatgaaagaaaacagaatttggagcgc
tttaagaaagcagatgtcagattcttgatctgcactgacgtcgccgctagaggaattgat
atctctggtgttccttatgttatcaacgtcacacttccggatgaaaaacagaactacgtc
catcggattggcagagtgggaagagctgaacggatgggtctggctatttctcttgtggca
acagaaaaagaaaaggtttggtatcactcatgccccagtcgaggaaaaggttgctataac
acccgactgaaggatgagggtggttgcaccatttggtacaatgagatgcagctgctgggt
gaagtagaagagcatctgaattgtaccatttcgcaggttgagccagatataaaagtccca
gtagatgattttgatggtaaagtcacctatgggaaaaggagagctgctggaggtggatcc
tataaaggccatgtggatattttggcacctacagtacaagagttggcatccctggaaaag
gaggcacagacatctttcttgcaccttggttaccttcccaatcaactgtttagaacattt
tga
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