Zootoca vivipara (common lizard): 118082471
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Entry
118082471 CDS
T07275
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118082471 (GEN1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
118082471 (GEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
118082471
NCBI-ProteinID:
XP_034965926
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Position
LG3:complement(101655353..101679500)
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AA seq
919 aa
AA seq
DB search
MGVTSLWQILEPVKEHVPLSSLKGKTLAVDLSLWVCEAQTVKKMVGIVRKPHLRNLYFRV
SLLTLMGIHLVFVMEGEPPELKEGTMRKRTEARFGPSSKPRRARTGRSRFKSLLKECLEM
LECLGVPWVQAAGEAEATCAYLNLNGYVDACITNDGDAFLYGAQTVYRNFTMNIKDPHID
CYSILAIEETLGCNRESLIGLGVLLGCDYLPKGVPGVGKEQALKLIKTVRGESLLQRFAH
WKDHFQDDIPALAVNKVIHCAVCRHPGAYKDHERSGCRLCGSVACCEPHDAEFCCPCDWH
SSEQDRQVSAVENGIKKKAKACKGFPFPEVIQEYLISKDKPMKLNGCRRPNLLSFQKFAF
EKMDWSKHYACEKLCILLTYYDMNRRKSGHFDPQQLQARRIIKTRTKNGIPCFEIEWQKP
DHYATADDQPAEPFLITTEEASLFEAAYPEVVARYHMEKLEICKGRNKGKKNKPKERECL
AGDSEIADLLSRLNMRSGEETFPGKDPKPPFTTVSGFQTVPEKGSKFQGLPVTAHFPTAV
TPSQKPPSTLLVTTLQNTEYNCIPGSSLSSQPENLCASSQIAHLQLSDIDWEGTSFSISP
KRVNIACSESESDASSNLPNQHSSLHCKTTEIITPSLNSVQYDPNLPRSKECSVSKTDLH
KGQNDLSSEEQAILKPSALEASHSISDMSLLNSLQTVEEINVTSSLEGKAPSPSTQLNDS
AQEVESISPGKYLQGLGLPNLLKNYENPARASDNLTSPRKPTCLGNKSPILSRKSTEVLD
SCRVRGKPTHKSSLKKSVCQKISSSEDSDGENVKGRKKGHRSPKWRRKARVVQLKDKCRD
KRSSHDLVSEVVPGDKSLKGPAINLPVEELPIAHIHNSLKLSESKLCQTSPPLQASETAA
WADSPLPLSERLKLRLQSS
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgaccagcctgtggcagatcttagaacctgtaaaagaacacgtccccctcagc
agccttaaaggaaagaccctggctgttgatttaagtctctgggtgtgtgaagcacaaaca
gttaaaaagatggttgggatagtcagaaaacctcaccttaggaatctttattttcgagtc
tctctgttaacgctaatgggaatccatttggtgtttgtcatggagggagagcccccagag
ctgaaagaaggcacaatgcgaaagaggacagaagctcgctttggcccatccagcaaaccc
aggagggcaagaacagggagatctcgttttaaatctctactgaaagagtgcctcgaaatg
ttggagtgcttaggggttccttgggttcaggcagcgggtgaagcagaagccacatgtgct
tatctgaacttgaacggctacgtggatgcctgcatcaccaacgatggtgatgccttcctc
tacggtgctcaaacagtttaccggaactttaccatgaacatcaaggacccgcacatcgac
tgctattcaatattagctattgaggagacactgggctgcaacagagaatcactgattgga
ttaggagttctactcggttgcgattatcttcctaagggagttcctggagttggaaaagaa
caggctttaaagttgattaagactgtgaggggagagagcttactgcaaagatttgcgcac
tggaaagaccacttccaagatgacatcccagccctggcagtaaacaaggtgattcattgc
gctgtgtgtcgtcatccaggagcttataaagatcatgagcgctctggatgccgtctctgt
ggcagtgtggcgtgctgtgaaccccacgatgcggaattttgctgcccttgtgactggcac
tcctccgagcaagaccggcaagtcagcgcagtggagaatggcattaaaaagaaagctaaa
gcatgcaaaggatttccatttcctgaggttatccaagagtacctaatcagcaaagataaa
ccgatgaagttaaatgggtgccggaggccaaatttattgtcctttcagaaatttgctttt
gagaaaatggactggtccaagcattacgcttgtgagaaattgtgcatcctcctcacatac
tatgacatgaacagaaggaagtctggccattttgacccacagcaactgcaggcacgacgg
ataatcaagacccggactaaaaatggtattccttgctttgaaatagagtggcaaaagcca
gatcattacgctacagcagacgaccagcctgcagaaccctttttaataacaacagaagag
gcatcactatttgaggctgcgtatccagaagtggttgcccggtaccatatggagaagttg
gaaatatgcaagggaaggaacaaaggtaagaagaataaacctaaagagagagaatgcttg
gctggggacagtgaaattgcagatcttctttctcggctgaacatgcgatctggtgaggaa
acctttcccggcaaagatcctaagcccccatttacaactgtttctggttttcaaacagtt
ccagaaaagggctctaaatttcagggcctacctgtaactgcacattttcctactgcagtc
acgccaagtcaaaagccaccatctaccttgctcgtgactactttgcaaaatacagagtat
aattgcattcctggcagttctctgagctcgcaacctgaaaacttgtgtgcgtcttcccaa
attgcccatctgcagttgagcgacatagactgggaaggaacatccttcagcatttctcca
aagcgggttaatattgcttgttcagaatctgagtcagatgcgagtagtaatttaccaaat
caacactcttcactacactgcaaaacaactgaaatcattaccccgtctttgaattctgtg
caatatgatccaaatctaccaaggagtaaggagtgctctgtctccaaaactgaccttcat
aaaggtcaaaatgatttatcttcagaagagcaggcaattctgaagccttctgctttggag
gcttctcacagcatttcagatatgtctctgttaaactctttgcaaacggtagaagaaatc
aatgttacatctagccttgaggggaaagctccatctccttcaactcagctaaatgacagt
gctcaggaagttgaaagtatatcgccaggaaaatatctgcagggacttggcttgccaaac
ttgctcaaaaactatgaaaacccagcccgggcgtcagataacctcactagtccacgaaaa
ccaacttgcttgggaaacaagtcaccaatattgtctcgcaagtcaacggaagtcttagat
agctgtcgggtgagggggaagcccactcataaaagctcgctgaagaagagcgtgtgccaa
aagatttcctccagtgaagacagtgatggtgaaaatgtgaaaggtagaaagaagggccac
agaagccctaagtggcgacggaaggctcgcgtggttcagctgaaggacaagtgtagggac
aaaaggagcagccatgatttggtgtctgaggttgtgccaggagataaatctcttaaaggg
cctgccattaatttgccagtggaagagcttcctattgcacacattcacaattctctgaaa
ctctcagaatctaagctttgtcaaacctctcctcctcttcaggcaagtgagactgccgcc
tgggctgatagcccccttcctctgtccgaacggctgaaactaagactgcagagcagttga
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