Zootoca vivipara (common lizard): 118082616
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Entry
118082616 CDS
T07275
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04382
Cornified envelope formation
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118082616 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118082616 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118082616 (COL4A2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
118082616 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zvi04147
]
118082616 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
zvi00536
]
118082616 (COL4A2)
Exosome [BR:
zvi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118082616 (COL4A2)
Glycosaminoglycan binding proteins [BR:
zvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118082616 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118082616
NCBI-ProteinID:
XP_034966261
LinkDB
All DBs
Position
LG3:complement(113140728..113286497)
Genome browser
AA seq
1719 aa
AA seq
DB search
MRRPPPLRVARPTGRVSQITLFLGLVLLLSGKVQAGGKSYTGPCAGRDCSGGCECFPEKG
ARGQPGLLGQQGFPGPPGVGGIPGLPGHKGYKGERGQPGITGPKGEAGQRGITGFSGADG
IPGHPGQAGSRGKPGHDGCNGTKGDAGQQGSQGPGGMPGFFGIQGPKGQKGEPFVFTPEL
AVQFRGDTGDPGLRGFPGPQGAPGAVGIYGPVGSTGLPGPPGPPGSPGLQGNRGLGFYGE
KGDKGEIGPPGLPGRPSTGEFVTSTDVISSEYKGEKGIKGKRGDAGIPGHHALPAEKGEE
GITGFTGQRGLPGINGLTGTEGDVGFPGHDGFPGIPGQKGIKGEPGDKGAQGPPAYAPHP
KLIKGARGDWGLHGAPGPEGNRGEQGSPGSPGPPGSSDDNSVGRGLPGEMGPKGLIGDPG
FAAVYPGPPGLDGDIGLPGLPGVPGPPGSPDTSVAVKGLPGFPGPPGNQGYPGPRGPKGW
KGEPGDCKCSCNCTERKRGPAGQPGPPGFPGPMGQAGRKGDPGDQGPHGVPGFPGAKGFP
GVPGPPGQQGPKGDSRYVTTRGSKGDQGIPGIPGYKGEDGLPGRDGTDGLPGLPGLPGDG
VRGEPGDPGEPGPLGPKGFPGEEGLPGVGLPGPKGYPGPLGDPGVPGSPGFQGSPGPPGA
PAEIDCGQTVKVFFRGNRTEPIQSGTSCIQAPKGTPGTPGIPGPRGAKGTRGIAGELGLH
GSKGLKGSLGDQGREGLAGPPGFPGPRGNRGSPGLPGEQGFPGSPGLPGWPGPPGVKGAA
GDRLGAPPGPQGDAGPPGIPGLKGPSGDHGLPGLRGSDGIPGQPGAKGHHGSPGPAGLTG
LPGPQGQFGFPGLPGQQGIMGRAGSPGFVGSPGARGDAGDPGKPGPVGMKGLAGDRGEAG
FFGTKGKAGEPGLPGLDGMHGLPGVKGAKGSSGIGGFKGAMGVRGRLGQNGIKGEPGFTG
LPGIRGLPGDSGLKGDRGERGPPGSPPKIVPSMMLDVKGEKGIEGESGAQGSFGFKGTKG
ALGYPGQTGRPGSPGFPGYEKGQKGDYGIKGTKGIPGYIGVSGGRGISGFPGATGRRGEK
GIPGIDGIFGKSGQPGEIGDWGDTINLPGRAGSKGDAGITGATGLEGAKGGKGDAGDPGF
PGLEGMRGSPGSPGLQGQRGFPGQVGEQGLSGDPGFPGSAGEKGSSGWIGLPGSKGAAGT
RGITGLHGLPSTKGFPGSPGPDGYGPPGFPGIWGDKGTVGEPSPIEGSRGVPGSKGERGD
PGQRGSPGSPGPEGRPGLPGVSNISGAPGDEGSPGLDGVPGYPGPPGPPGIAAPPGSKGE
VGQIGIIGEDGSKGFRGDHGPDGRPGIPGFPGAKGYKGEQGVMGFVGILGMPGDFGPTGP
KGDRGFPGFQGPPGSPGPPPVLPKLVSEQGISGAPGNRGLPGTLGEMGPQGPPGSPGSRG
PMGKQGLQGRGGIPAAPGFRGDQGRTGLQGPGGLEGAAGDPGTPGLPGMPGRSINMGYLL
VKHSQADQEPMCPVGMSKLWSGYSLLYFEGQDKAHNQDLGLAGSCLTRFSTMPFLYCNPG
DVCYYASRNDKSYWLSTTAPLPMMPVQEDEIQPYISRCSVCEAPAVAIAIHSQDANIPHC
PEGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGAQGTCHYFANKY
SFWLTTIDNQFQHSPSADTLKAGLIRSHISRCQVCMKNL
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgccccccgccgctgcgcgtcgcccgccccactggccgggtttcacaaattacg
ctctttctgggattggtgctgctgcttagtggtaaggtgcaagctggagggaagtcttat
acaggaccttgtgcaggaagagactgcagtgggggttgtgaatgtttcccagaaaaagga
gcccgtggccaaccaggacttcttgggcagcagggattcccaggaccgcctggagtggga
ggtatcccaggacttccagggcacaaaggatataaaggcgaaagaggccaaccaggaata
actggaccaaagggagaagcggggcaaagaggcatcactggtttttctggtgcagatggc
attcctggtcatccgggtcaagcaggatcaaggggcaaaccaggccatgatggctgcaat
gggaccaagggggacgctggtcagcagggaagccagggacctggaggcatgcccggattc
tttggaatccaaggacccaaaggtcagaagggagagccctttgtttttactccggaatta
gccgtgcagttcaggggagacactggtgacccaggtttgaggggcttcccgggacctcaa
ggtgctcctggtgcagtgggtatatatggtccagttggaagcacaggtctacctggacct
ccagggccaccaggatctccaggacttcagggcaacagaggccttggcttttatggagaa
aagggtgacaagggtgagattgggcctcctggtctccctgggcgcccgtcaacaggagag
tttgtcacttcaacagatgtaatttcaagtgaatataagggtgagaaaggaataaaaggt
aaaaggggagacgctggaattccgggtcatcatgcacttccagcagaaaagggagaggaa
ggaataacaggctttacaggacaacgaggtttgccgggaatcaacggtctcacaggaaca
gaaggggatgtgggtttcccaggacatgacggcttccctggcatccctggtcaaaaagga
attaagggagagccaggagacaaaggtgctcaaggaccaccagcttatgcaccacacccc
aaactaataaaaggtgcaagaggtgactggggactccatggtgctcctgggcccgaggga
aaccgaggcgagcaaggcagtcctggaagtcctggtccgccaggatcatcagatgataac
tctgtgggaagaggtttgcctggagaaatgggtcccaaaggcctgattggcgatccaggt
tttgcagctgtttatccaggtcctccaggattagatggcgatattggattacctggatta
ccgggtgtccctggccctccaggaagtccagatacttctgttgcagtgaagggtcttcca
gggtttcctggtcctccaggaaaccaaggttacccaggaccacgagggccaaaggggtgg
aaaggagagccaggagattgtaaatgttcttgtaattgtaccgaacgaaaaagaggccct
gctgggcaacctggtccaccaggatttccgggtccaatgggacaggcggggagaaaagga
gaccctggtgatcaaggcccacatggagtgcctggctttcctggtgcaaaaggattccct
ggtgtacctgggccacctggacaacaagggccaaaaggagattcacgatatgtgaccacg
agaggtagtaaaggagaccaaggaattccaggaattcctggatataaaggagaagatggt
ttgccaggaagagacggcacagatggtttgccaggactacctgggcttccaggtgatggt
gtacgaggtgaaccaggggatcctggtgaacctggtccattaggtccaaagggttttccc
ggagaagaaggcttgccaggtgttggcttgccaggcccaaagggatatcctggccctctg
ggtgaccctggggtccctgggagtcctggcttccaaggttccccaggacctccaggcgct
cctgctgaaatagattgtggacagacagtcaaagtctttttcagaggtaacagaactgag
ccaattcagtcaggaactagctgtattcaggcacctaaaggaactccaggaactccaggg
attccaggaccaagaggtgccaaaggtacaagagggattgcaggcgaactgggtctgcat
ggatccaaagggctgaaaggctctctgggagatcaaggtcgcgagggcttagcaggccca
ccaggatttcctgggcccagaggaaatagaggttcacctggattgcctggggagcagggc
tttcctgggagtccaggattgccaggttggccaggccctccaggagtgaaaggagctgca
ggtgatagacttggagcgcccccaggcccccaaggggatgctgggccaccaggaatcccg
ggactgaaaggcccctcaggagatcacggcttgccaggactgagaggaagtgatggcatt
ccaggtcagcctggagctaaagggcatcatggatctcctggccctgctggcttgaccggt
ttgccaggaccacaaggacaatttggattccctggactgccaggccagcaaggcatcatg
ggcagagccggctcaccagggtttgtgggctcaccaggtgccagaggagatgcaggagac
ccagggaaacctggtcctgtgggaatgaaaggtctggcaggtgacagaggtgaagccggt
ttctttggaactaaaggcaaggctggtgagcctggtctccctgggctggatggaatgcac
ggtcttccaggtgtaaaaggtgctaaagggtcctctggaattggaggtttcaaaggtgcg
atgggcgtcagagggcgactagggcagaatggaatcaaaggagagcctggcttcactggc
ctgccagggattcgaggtttacctggggactcgggattgaaaggtgaccgtggtgaacgt
ggcccaccaggatcaccccctaaaatagtgccaagtatgatgcttgatgtgaaaggcgaa
aagggaattgaaggagaaagtggggcccaagggagctttggtttcaaaggcacaaaagga
gcactaggctaccctgggcagacaggaaggccaggttcacctggctttccaggttatgaa
aaaggtcaaaaaggtgactatggaattaaaggaacaaaaggcataccaggatatataggt
gtttcaggaggtcgtggtatttctggtttccctggagcaacgggaaggaggggggaaaag
ggaattccagggattgatggtatttttggcaaaagtggccagcctggggaaattggtgat
tggggagatactataaacttgccaggaagagcaggttcaaaaggagatgctggcataact
ggagccacagggctagaaggagccaaaggaggaaaaggtgatgctggagatccaggtttt
cctggccttgagggcatgaggggctccccaggctcccctggattgcaagggcaaagagga
ttcccaggccaggttggtgaacaaggtttatctggagatccaggatttcctggatcagca
ggtgaaaaaggaagttctgggtggattgggcttccaggaagtaaaggcgctgctggcacc
agaggaatcactggattacatggtttgccaagtaccaagggctttccaggatcaccaggt
ccagatggatatggcccgccaggtttcccaggtatttggggtgacaaaggtactgtagga
gagccaagcccaattgaaggcagcagaggagttcctggttcgaaaggagaaagaggagat
ccaggacagagaggctcacccggcagccctggacctgagggaagaccaggccttcctggg
gtttcaaacatatctggagcacctggcgatgagggatcaccaggtttggatggtgtgcca
ggctacccaggaccaccaggaccaccaggaatagctgctccgcctggaagcaaaggagaa
gtggggcagatcggcataattggagaagatggttcaaaaggatttagaggagaccatggc
ccagatgggagacctggaattccagggttccctggggcaaaaggatataaaggggaacaa
ggagtcatgggctttgttggcatattgggaatgcctggtgactttggccccactggaccc
aaaggagaccgaggatttcctggatttcagggacctccaggttcccctggaccacctcct
gtccttcctaaactggtttcagaacaagggatctccggtgctcctggaaacagagggctt
cctggcacgttgggtgagatgggtcctcaaggcccaccaggatctccaggttctagaggc
cccatgggtaagcaagggctgcaaggaagaggggggatacctgcagctccaggcttccga
ggtgaccaagggagaacaggactgcagggcccagggggcttggaaggtgcagcaggtgac
ccaggtactcctgggctgccaggtatgcccggccgcagcatcaacatgggatatcttttg
gtgaagcacagccaggcggatcaagagcccatgtgtccagtgggcatgagcaaactctgg
agtggatacagcttgctctactttgaaggacaagataaggcacacaatcaggatctaggt
ctagctggttcatgtttgactcgattcagcactatgccttttctttactgcaatcctggg
gacgtctgctattacgcaagtcgcaatgataagtcttactggctctcaacgacagcccct
cttccaatgatgcctgtgcaagaggacgaaatccagccatatatcagccgctgctccgtc
tgtgaagctccagctgttgccatagccattcacagccaagatgccaatattccacactgt
cctgaaggatggcgcagtttgtggatcggctattccttcctcatgcacactgcagctggt
gccgaaggtggcggacagtcacttgtgtctccaggtagctgtttggaagacttccgagca
acaccattcattgaatgcaacggtgctcagggaacctgccactactttgcaaacaaatac
agtttctggctgaccaccattgacaatcaatttcaacactccccttcagcagatacactc
aaggctggactcatccgatcacacatcagccgatgccaagtctgtatgaaaaatttgtaa
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integrated database retrieval system
