Zootoca vivipara (common lizard): 118083016
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Entry
118083016 CDS
T07275
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04517
IgSF CAM signaling
zvi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118083016 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118083016 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zvi04812
]
118083016 (SPTBN1)
Cytoskeleton proteins [BR:
zvi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118083016 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
118083016 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
118083016
NCBI-ProteinID:
XP_034966852
LinkDB
All DBs
Position
LG3:complement(9766275..9973869)
Genome browser
AA seq
2358 aa
AA seq
DB search
MTTTVATDFDNIEIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYADLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKENVFRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHTLVEADISIQAERVRGVNALAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSSHFQQAIKEGEDMIAEDHFGSEKIRERIA
DIQNQWANLEQLSTIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSSDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIMDSLHEQAGALPREHAESTDVQSRLSGMEERYKEVAELTRL
RKQALQDTLALYKMLSEADACELWIDEKEQWLINTEIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLIHNGHPSEKEIKAQQDKLNTRWSQFRELVDVKKEALLSALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHESIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REGASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMQLTAEKPETEGIVKEKLTSLHHMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSADEVDSKRFVVEKKFVELLEPLTERKAHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDVFERSQNIITDSSLNAE
AIQQRLADLQQLWSLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQRRENEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKTGEESQQWDGTKGEQVSQNGLPPDQESPRMGESREANEMVNGAADQRTSSKET
SPVPSPTADRKAKAGLQAQTAATLPAKTQEAPSTLLEGFLHRKHEWESHNKKASNRSWHN
VYCVINKQDMGFYKDAKAASSGIPYHNEIPVSLKEAACEVAVEYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNAWIQAIASAISDKTELSTSTHSTPATSRAQTLPASVTITSESSPGKRE
KEKEKDKEKRFSLFGKKK
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcgacagactttgacaacattgaaatccaacagcaatacagtgat
gtcaacaaccgctgggatgttgaagagtgggacaacgagaacagttccgcacggctgttt
gagaggtctcgcatcaaagccttagcagatgaacgagaggcagtccagaagaaaactttc
actaagtgggttaactctcacttggcacgtgtgtcctgtagaattacggacttgtacgcc
gaccttcgcgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaagccaacaaaggggaggatgcgcattcactgcttggagaacgtcgacaaagccctc
cagttcctgaaagagcagcgagtgcacctcgaaaacatggggtcccacgatatcgtggac
gggaaccacagactaaccctcggccttatttggactatcatattgaggttccagatccaa
gacatcagtgttgaaacagaagacaacaaagagaagaagtctgcgaaagatgcactgcta
ctatggtgccagatgaagacagccggctatcccaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcgctaatccataaacacaggcccgacctaatt
gattttgataagctgaagaaatcaaatgcccactacaacctgcagaacgcttttaacctg
gcagagcagcaccttggccttactaaactcctggacccggaagatatcagtgttgaccac
cctgatgaaaagtccataatcacctacgttgtgacatattaccactacttcagcaagatg
aaagctttagccgtggaaggaaagcgcattggaaaggtgcttgacaacgccatcgaaaca
gagaagatgattgaaaagtacgagtcgctggcttccgacctcctcgagtggattgagcaa
accatcatcatcctgaacaaccgcaagtttgccaactcgctggttggggtgcagcagcag
ctgcaggcgttcaacacctaccgcacagtggagaagccacccaaattcacagaaaaagga
aacttggaagtcttgctcttcaccatccaaagcaaaatgagggctaataaccagaaagtg
tacatgcccagggaagggaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagggaactggcactgcgtaacgagctcatccgacaggagaaactg
gaacaactcgcccgcagatttgaccgcaaggcagctatgagggagacgtggctgagtgaa
aaccagcgtctggtttctcaggacaattttgggtttgacctccccgctgtggaggctgcc
acaaagaagcacgaagccatcgagaccgatattgccgcttacgaggaaagggtccaggcg
gtggttgctgtggccagggagcttgaggctgagaactaccacgacatcaaacgcatcacg
gccaggaaagagaatgtgttccgcctatgggagtacctcctggagctgctcagggcacgc
aggcaacggctggagatgaaccttggtctgcagaagatattccaggagatgctgtacatt
atggactggatggatgagatgaaggtgttgttgctgtctcaagactatggcaagcatctc
ctcggagtggaagacctattgcagaaacacacacttgtcgaggctgacatctccattcag
gccgagagagtgagaggcgtcaatgcattggcccaaaaatttgccacagacggagaaggt
tacaagccttgtgacccgcaagtgatcagagaccgagtggctcacatggagttctgctac
caggagctgtgtcagttagcggccgagcgccgagctcgcttggaagagtcccggcgcctc
tggaagttcttctgggagatggctgaagaggagggctggataagggagaaagagcagatc
ttgtcgtcagatgactacggaaaagacttgaccagcatcgtccgccttctcagcaagcat
aaggcgtttgaggacgagatgagcggtcggagtagccactttcagcaggccatcaaggaa
ggcgaggacatgatagccgaggatcactttgggtcggagaagatcagagagaggatcgcg
gacatccagaaccagtgggccaatctggagcagctctccaccatccggaagaagcgactt
gaagaagcgtccctcctccaccagttccaggcagacgccgacgatatcgacgcgtggatg
ttggacatcctcaagattgtctccagcagtgacgttggccacgacgagtattcgactcag
tccttggtgaagaaacacaaagacgtcgcggaggagattgcaagctacaggtccatcatg
gattccctgcatgaacaagccggagccttgccgcgggagcacgcagagtcgaccgatgtg
cagagcaggctgtccggaatggaagaaaggtacaaggaggttgccgagctcacacggctt
cgtaaacaggccctgcaggacacgttggccctgtacaagatgctcagcgaagcggatgcc
tgtgagctttggattgacgagaaggaacagtggctgataaacacggagatccccgagaaa
ctggaagacttggaggtgatccagcacagatttgaaagtttagagccagaaatgaacaat
caggcatcacgggttgctgtggtgaaccagattgctaggcagctgatccacaatggccat
ccgagcgagaaggaaatcaaggcgcagcaagataagctcaacacaaggtggagccagttc
agagagcttgttgatgtgaagaaagaggccctgctctcagccctcagtatccagaactac
caccttgaatgcaacgaaaccaagtcgtggatcagggagaagacaaaggttattgaatcc
acccaagagcttgggaatgacctggccggcgttatcgctcttcagaggaagctgaccggg
atggagcgcgatttggtcgccatcgaggccaagttaagcgacctgcagaaagaagccgaa
aagttggaatctgagcaccccgaccaagctcgggccatcctgtcgaggcttgccgaaatc
aacgacgtttgggaagagatgaagacgaccttgaagaaccgtgaagagtcccttggggag
gcgagcaagctgcagcagtttctgcgcgacctggacgacttccagtcttggctgtcccgg
acccagacggccattgcctcggaagatatgccgaacacgctgacggaggccgagaagctg
ctcacacagcatgagagcatcaagaacgagatcgacaattacgaagaagactatcagaag
atgagagacatgggcgagatggtgacccaagggcagacagatgctcagtatatgttcctg
caccagcgcctgcaagccttggacactggatggaacgagctgcacaagatgtgggaaaat
cggcagaaccttctctcccagtcccatgcctatcagctgttcctcagagacacaaagcaa
gcagaagccttccttaacaaccaggaatatgttttggcacacactgaaatgcccaccact
ttggaaggggcggaagctgcaatcaaaaaacaggaggatttcatgaccacaatggatgcc
aacgaggagaagatcaacgcagttgtagagaccggaaggaggctggttagcgatggcaac
atcaactctgacaagatccaagagaaagtggactccattgatgacaggcataagaagaac
cgggagggggccagcgagcttctgatgagattaaaagacaacagagatcttcaaaagttt
cttcaggattgccaagagctgtcgctctggattaatgagaagatgcttacagcacaggac
atgtcttacgatgaagcgaggaacctgcacagcaaatggctgaaacaccaggccttcatg
gcagagcttggttccaacaaagaatggcttgacaaaattgaaaaggaagggatgcagctc
accgccgagaaacccgaaacggagggaatcgtgaaagagaagctgacgagtctgcaccat
atgtgggaagtgcttgaaagcaccacccagacgaaagcccagaggctttttgatgccaac
aaggctgagctgttcacccagagctgcgctgacttggacaagtggctgaatggcttggag
agccagattcagtcagacgactatggcaaggacctcaccagcgtcaatattctgctgaag
aagcaacagatgcttgagaaccaaatggacgttcgtaagaaagagatcgaggagctgcag
agccaggcccaggcgctgagccaggagggcaagagtgccgacgaagttgacagcaaacgc
ttcgtcgtggagaagaagtttgtggagctgctggaacccttaaccgagaggaaggcccat
ttgctggcctccaaggagatccaccagttcaaccgggatgtggaggacgaaattttgtgg
gttggagagaggatgcccattgccacatcgacagatcatggtcacaacctgcagactgta
cagttgctcattaagaagaatcagacacttcagaaggaaatccaggggcaccagcctcgc
atcgacgacgttttcgagaggagccaaaacataattacagacagcagccttaacgccgaa
gcaatccagcagcggctcgcagacttgcagcagctgtggagcctcctgatagaggagacg
gagaaacgccataagcgccttgaagagtcccacaaagcccagcagtactactttgacgcc
gcggaggctgaagcctggatgagcgaacaggaactctacatgatgtcagaagagaaggcc
aaggatgaacaaagtgcagtttccatgttgaagaaacaccagattttggagcaggccgta
gaagactatgctgagacagtgcaccagctatccaagacgagcaggactttggtggcagac
aatcatccagagagtgagcgcattagcatgcggcagtccaaagtagacaagctgtacgca
ggcctgaaagacctcgccgaggagaggagaggcaagctggacgagagacacaggctattc
cagttgaaccgcgaagtggatgacttggagcagtggattgccgaaagggaagtggtggcc
gggtcccacgagctgggacaggattacgaacatgtgacaatgttgcaagagcgattccgc
gaatttgcccgggacaccggcaacattgggcaggagcgtgtggacaccgtcaaccacatg
gctgatgagctcatcaactccggacattctgatgccgccaccattgctgagtggaaggac
ggtctcaacgaggcctgggctgacctcctggaactcatcgacacgagaacgcagatcctc
gccgcctcttatgaactgcacaaattttaccatgatgccaaggagatctttggccggata
caggacaaacacaagaagctgcctgaggagcttgggagggaccagaacacggtggaaacc
ttgcagaggatgcatacaacgttcgaacacgacattcaggccttagggacacaggtaagg
caactgcaagaagatgccgcccgcctccagtctgcttatgctggagacaaggccgacgat
atccaaaggcgcgaaaatgaggttttggaagcgtggaagaccttgctcgatgcctgcgag
ggacgcagggtcaggctagtagacaccggggacaaattccgcttcttcagcatggtccga
gacctcatgctttggatggaggatgtcattcgtcagatcgaagcccaagagaagcctagg
gatgtttcctccgtagaattgctgatgaacaatcaccagggaatcaaagcagaaatagat
gcccgtaacgacagctttacgacttgcattgagctgggcaaatcgttgctggcgaggaaa
cactatgcgtcagaagagatcaaggaaaagctattgcagctcacagagaagagaaaagaa
atgattgacaaatgggaagacagatgggagtggctgagactgattttggaagtgcaccag
ttttcaagggacgccagcgtcgccgaagcctggctgctggggcaggagccgtacctgtca
agccgcgagatcgggcaaagcgtggacgaagtggagaagcttatcaagaggcacgaagcg
ttcgaaaagtccgctgcaacttgggacgagagattttcggcgcttgaaagacttactacg
ttggaattgttggaagtacgtcgacagcaagaagaggaagagaggaagaggcagcctcct
tctccggagccaagccccaagaccggagaagagtctcagcaatgggacggcacaaaagga
gagcaggtatcccagaatggtttgccaccagaccaggaatctcctcggatgggagagtcg
agggaagccaacgaaatggtcaacggagcagcggaccagaggacaagctccaaggagacg
agtcccgttccttcgcccacggccgaccgcaaagccaaggctggcctccaggcccagaca
gccgccaccctcccagccaaaacgcaagaagcgccttccactctgctggagggcttcttg
catcgcaaacacgaatgggagtcacacaacaagaaggcttcaaacagatcctggcataac
gtctactgtgttattaacaagcaagacatgggcttttacaaagatgccaaggccgcttcc
tcgggcatcccctaccacaacgagatccccgtcagcttgaaagaagcggcatgcgaagtg
gcggttgaatacaagaagaaaaagcatgtgttcaagctaaggttaactgacggcaatgag
tacctcttccaagccaaagacgatgaggaaatgaacgcatggatccaggccattgcctct
gcgatctcggacaaaactgagttgtccacaagcacacacagcaccccagcgacgagccgc
gcccagaccctgccagccagtgtgacaataaccagcgagtccagtcctggcaagcgggag
aaagagaaagagaaagacaaagagaagagattcagcctttttgggaaaaagaagtga
DBGET
integrated database retrieval system
