Zootoca vivipara (common lizard): 118083029
Help
Entry
118083029 CDS
T07275
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zvi03012
]
118083029 (DHX57)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
118083029 (DHX57)
Translation factors [BR:
zvi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
118083029 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
RWD
zf-CCCH_4
HA2_C
HA2_N
zf-CCCH
zf_CCCH_4
zf-CCCH_2
nSTAND3
AAA_22
AAA_14
NPHP3_N
AAA_19
Torus
Myc_N
Viral_helicase1
NB-ARC
ResIII
UBA
Motif
Other DBs
NCBI-GeneID:
118083029
NCBI-ProteinID:
XP_034966917
LinkDB
All DBs
Position
LG3:13255664..13287244
Genome browser
AA seq
1374 aa
AA seq
DB search
MSSSGKRRGKPNRGGGRGARRGRGGGGGSSSCGRPSYKHHASGSKKGSDKIWEDDGDFCV
DDDDGDFCVFSGPKDVARSSSASRGHGQTRQAPKTKMPLQTLYMTSDNQMRVKELLRELQ
GQELAAGSEMLVSGEDDCDELDYLEDEHAWSDGQSISGKSTNASYQPPVSHVLETEVSSF
AVQKLSRYGFDSERCQAVLKSCNSNIGASLELLLLQCFSEKFGERMQITETAAQTSMEDC
LEQRQEEAFVLRSICGDKFVERINNRVWTVALDLAYLTEMLNKPKEGNSNTSNGLKPASL
EICKHYLQGDCRFGSRCKFRHETRNKQKGLPSVKEDAHLRVNAPVYELEIRFPEDNKYPY
QPPLVAFYTTNEKLPLACRLHIAEFLYEKAIISSESNEPVVYAFITSLEDEAEVTKLLSK
TSHRYSAPPLPLGTPLSSTDVHKQEMPSSSHVPSRISEATKELVTEEEEDEEDEELQTVH
IEKESYVNLRKKKYRTSAEPTCKENYKICRQFRIKKSSRHYQSLLQERQKLPAWEERETI
LNLLNKYQVLVVSGMTGCGKTTQIPQFILDASLEGPPSNLANIICTQPRRISAISVAERV
AKERTERVGVTVGYQIRLESVMSSATRLLYCTTGVLLRRLEGDMSLKGVTHIIVDEVHER
TEESDFLLLILKDIMSRRPDLRIIMMSATLNAELFSQYFNSCPVVSIPGRTFPVDQFFIE
DAIAVTRYVLEHGSPYIRRTKQSVDKKARHLRTAAEEVEDDLRRSGLVQSTVAVAAKDSL
PDQQLTFQQLLIRYKGVSKSVLKTMEKMDLDKVNLELIEALLEWIVSGGHSYPPGAVLIF
LPGMEEIKTLYKQLQSNPLFNNRRSNRCVVYPLHSSLSSEEQQSVFLKPPVGVTKIIIST
NIAETSITIDDVVYVIDSGKMKEKRFDPSKGMESLEDTFVSKANALQRKGRAGRVASGVC
FHLFSSHHYNHHLLKQQLPEIQRVPLEQLCLRIKILDMFSTQSLHSVLMRLIEPPTAESL
RSSKQRLQDVGALTSDEKLTPLGYHLASLPVDVSIGKLMLFGTIFRCLDPALTIAASRAH
KSPFVSPWDKREEAFKKKLEFAIGNSDYLALLQAYKGWRTASKDGFQASYTFCRQNFLSE
SVFLQMASLKRQFTELLSDIGFVKEGLRAKDIERRWSQGGDGVLEATGEEANANADNVKL
ISAMLCAALYPNVVQVKMPEGKYQKTSTGAVKMKPKAAELKFVTKKEGSVHIHPSSVNYQ
TRHFDSPYLVYHEMIKTSRVFIRDCSMVSVYPLILFGGGRVNVHLQKGEFVVSLDDGWIR
FVAASHQVAELVKELRCELDQLLQDKVKNPSIDLCTCPRGSRIISMIVKLVTTQ
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcggggaagagaagaggaaaaccaaacagagggggaggaaggggagcaaga
agaggaagaggcggaggtggcggcagcagtagctgtggtagaccttcctacaaacaccat
gctagtggcagcaaaaaaggctcagataaaatttgggaagatgatggtgatttctgtgtt
gatgatgatgatggtgatttctgtgttttcagtggaccaaaagatgtagccaggtcaagc
tctgctagcagaggacatgggcagaccagacaagcacccaaaacaaagatgcctcttcag
actctgtacatgacatccgataatcagatgagggtgaaagaacttcttcgtgagctgcaa
ggacaagagttggctgctggttcagagatgcttgtatcaggtgaagacgactgtgatgaa
ttggattacttggaggacgagcatgcctggtcagatgggcaatcaatttctggaaaaagc
acaaatgcttcttatcaaccacctgtgagccatgttctagagactgaagtctcttcattt
gctgtgcaaaaactatccaggtatggctttgatagcgagcgttgccaagctgtgctgaaa
tcttgtaatagtaacattggggcatccctggagctcttactcctgcagtgcttttcagaa
aaatttggagagaggatgcagatcacagaaactgctgctcagacaagtatggaagattgt
ttggaacaaaggcaagaggaagcatttgtcctccgttcaatatgtggagacaaatttgtg
gaaagaattaataacagggtctggactgttgcattagacttggcatacttgacagagatg
ctcaacaagccaaaagaagggaatagcaacaccagtaatggcctaaagccagcttccctg
gaaatctgtaaacactacctccaaggagattgcaggtttggatcaagatgcaagttcagg
catgaaactcgaaacaagcaaaaaggccttccgagcgtcaaggaagatgctcatctcaga
gttaatgctcctgtttatgaacttgaaataagatttcctgaggataacaaatacccttat
cagccgccccttgtggcattctatactactaatgagaagctgccattggcttgccggttg
cacattgctgaattcctttatgaaaaggccataatatcgtcggagtctaacgaacctgtt
gtttatgcttttataacaagcctagaggatgaagctgaagtaacaaaattgcttagtaag
acttctcacagatacagtgctcctcctttgcctctgggaacacccttgtcaagtacagat
gttcataagcaagagatgcctagcagctctcatgttccttcccggatttcagaagcaact
aaggagttggtgactgaagaggaggaggacgaggaggacgaagagctgcagacagttcac
atagagaaagagagttatgtgaatctcaggaaaaagaagtaccgcacatcagcagagcca
acttgcaaagaaaattataaaatttgccgtcagttcaggataaagaagtcttctagacac
taccagtccctattgcaagaacgacagaaacttcctgcatgggaagagagagaaaccatt
cttaacttgctgaacaaatatcaggtcctggttgtgagcggtatgactggatgtggaaag
accactcagattcctcagtttatcttggatgcctccctagaaggtcctcccagtaattta
gccaacatcatctgcacccagcctcgcaggatctcggccatttctgtggctgaacgtgta
gccaaggagcgaacggagagagttggggtcacagtcggataccaaattcggctagaaagc
gttatgtcttcagctacccggttgttgtactgtactactggagtgcttctgaggaggctt
gaaggggacatgagtttaaaaggagtcacccatattatcgttgatgaggttcatgagaga
acagaagaaagtgacttcttgctgctgattttgaaagatataatgtctcggaggccagac
ctgcgcattataatgatgagtgctaccctgaatgcagagctcttttctcagtactttaac
tcctgtcctgttgttagcataccaggtaggacgttccctgttgatcagttttttatagaa
gacgctattgcagtgactcggtatgtcttggagcatggcagtccatatatacgtcgaaca
aagcaaagtgtggacaagaaagcaagacacctgaggactgctgcagaggaagtagaggac
gacctaaggcgttctggcctggtgcaaagtacagtggctgtggctgccaaagattcactt
ccagaccagcaactaacattccagcagttactgatccgctacaaaggggttagcaaatca
gtattaaaaacaatggagaaaatggatttagacaaagttaatcttgaattaattgaggcc
ttactggagtggatcgtcagtggcggacattcgtatccaccaggtgcagtactgattttt
ttgccaggcatggaagaaattaaaacactgtataagcagttgcaatctaatccactcttc
aataaccggcgcagcaatcgctgtgttgtttatccacttcattcctcactttcaagtgag
gagcagcaatctgtgttccttaagcctcctgtaggggtcaccaagatcatcatatctaca
aacattgcagaaacctccattaccatcgatgatgtggtctacgtgattgattcagggaag
atgaaagaaaaaaggtttgatccaagcaaaggcatggaaagcctggaggatacatttgtg
tccaaagccaatgccttgcaaaggaaaggacgagcaggccgggtagcctctggggtctgt
tttcatctcttcagtagccatcattacaatcatcaccttttgaagcagcagttacctgaa
atacaaagagtgcctttggaacagctctgtctcagaattaagattttggacatgttctcc
acacaaagccttcattcagttctcatgcggctgattgagccaccaacagccgaatctcta
cgttcctcaaagcaacgactgcaggatgttggagccttaacttcagatgagaagctcacg
cccttggggtatcatttggcttccttgcctgttgatgtcagtattgggaagctaatgctg
tttggcaccattttccgctgtctggatccagcactgacaattgcagcaagcagagcccac
aagtctccctttgtttctccatgggacaaaagagaggaggcattcaagaaaaagctggaa
tttgcaataggaaacagtgattatcttgctcttctccaagcatataagggatggcgtaca
gcttcaaaggacggctttcaagcaagttacacgttttgtagacaaaatttcttatcagaa
agcgtttttctgcaaatggccagtttaaaaaggcagttcacggaactgttgtctgacatt
ggatttgtgaaagagggactcagagccaaggatattgagaggaggtggtctcagggagga
gacggcgttctggaagcaactggagaagaggcaaatgctaatgcggacaacgtcaagtta
atatcagccatgttatgtgctgctctgtatcccaatgtggttcaggtgaaaatgccagaa
gggaagtatcagaagaccagtacaggagctgttaaaatgaagccaaaagctgcagagctg
aagtttgttactaagaaggagggctctgttcacattcatccatcctctgtaaactaccag
acaaggcactttgatagcccttacttagtgtatcacgagatgataaaaaccagccgggtg
tttattcgagactgcagcatggtgtctgtgtacccactgatcttgtttggaggcggccgt
gttaatgtgcatcttcagaagggagagtttgttgtttccttggacgatgggtggattcgt
tttgttgcagcctcacaccaggtagccgaactagtgaaagaacttcgctgtgagcttgac
cagctactccaggataaagtaaaaaaccccagcatagatctttgtacctgccctcgaggg
tctcgtatcattagcatgatcgttaaacttgtgaccacacaataa
DBGET
integrated database retrieval system
