Zootoca vivipara (common lizard): 118083070
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Entry
118083070 CDS
T07275
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118083070 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118083070 (POLR1B)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118083070 (POLR1B)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118083070 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
118083070
NCBI-ProteinID:
XP_034967006
LinkDB
All DBs
Position
LG3:15487712..15511401
Genome browser
AA seq
1155 aa
AA seq
DB search
MGDSACKWRALPSGPSLRNLTAPDYGLPKERQTPALQNVARAHTESFNYAVGEGLQRAVQ
AIPPLEFIYKNDRITLAIVGATINPPMVPKGSICNELKVYPAECRGRKSTYRGKITADIS
WALNGTPKGIIKQSLGNAPIMVKSKLCNLHGLSPKELIKHHEEEEEMGGYFIVNGIEKVI
RMVIMPRRNFPLAMIKPKWKSRGPGYTQYGVSIHCVRDEHTAVNMTLHYLENGTVMLNFI
HQKELFFLPLGFVLKALVSFSDFQIFQELIKGKEEDTFYKNCMSQMLRLVAEDGCMTQKQ
VLIFLGQRFRVKFSLPDWHSSEQVGEFLLDQCICIHLNNKAEKFYLLCFMTRKLFTLAKE
GCMEDNPDSLMNQEVLTSGQLYLMFLKEKLETWLQSVKIALDKKAQRSAMTINAENMMKI
LGMGTDITRMFEYLLATGNLRSKTGLGMLQSSGLCVVADKLNFIRYLSHFRCVHRGADFL
KMRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAPCEIVTQASYTFSLPSLLCSLGG
MLAVDGVDASHTAVQLSVGVTPVDAVPSQPYSECYPVSLDGSPVGWIEKDQAPGLVETLR
HFKAMQEKKIPVWTEVVLVPMTGKPSLYPGLFIFTTPCRMMRPVQNLALGKEELIGTMEQ
VFMNIAVSEDEIQPGLTTHQELFPHSILSVVASFIPFSDHNQSPRNMYQCQMGKQTMGFP
LLTFPYRSDDKLYRLQTPQSPLVRPAMYDHYDMDSYPIGTNAVVAVISYTGYDMEDAMIL
NKASWERGFGHGSIYKTQRIDLAEKVKKGEDNLVFGIGQDKLTTLQNLDPDGLPHIGARL
QYGDPFYSYVNLNTGESFVTYHKNKEICIVDNIKVCSNDTGTGKFRCVCITLRVPRNPTI
GDKFASRHGQKGILSRLWPAEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAA
LHGLCHNATPFTFSEENSALEYFGEMLKAAGYNFYGTERMYSGVSGVELEADIFIGVVYY
QRLRHMVSDKFQVRTTGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGASFLLHDRLF
HCSDRSVTHVCIECGSLLSPLLKPPPEWSATRIRQHVCTTCGRSDTIETIAVPYVFRVFV
AELASINVKVKLSVS
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcgcgtgcaagtggcgggctttgcccagtggccccagcctcaggaacctc
acggcgccggactacgggctgcccaaggagcgccagacgccggccctgcagaacgtggcg
cgggcgcacaccgagtccttcaactacgccgtgggagaagggctgcagcgggccgtgcag
gccattccacctttggaatttatttacaagaatgatcggatcactttggccattgtgggg
gccaccatcaaccctcctatggtaccaaaaggaagtatatgtaacgagctgaaagtttac
ccagcagaatgcaggggtcgcaaaagcacctaccgcggaaaaataactgctgatatcagc
tgggcactgaatggcacccctaaagggattataaaacagtccctcggaaatgctccaatt
atggtgaagtccaaactttgtaatctccacggtctctctcccaaagagctcatcaaacac
catgaggaggaagaggaaatgggaggctatttcattgttaacggtatagaaaaggtgatc
agaatggtgattatgccaaggcgcaactttccccttgcaatgattaaaccaaaatggaaa
tccagaggtccaggctacacacaatatggtgtctcaatacactgcgttagagatgaacac
acagcggttaacatgacccttcattaccttgaaaatggcacagtgatgctgaacttcatt
catcaaaaagagctgttctttcttccactcggatttgtactgaaggcattagttagtttc
tcagatttccagatttttcaggagttgattaaaggaaaagaagaggatactttctacaag
aactgtatgtctcagatgctgcggctggtagcagaggatggctgcatgacgcagaaacaa
gtcctcatcttcctggggcagcgcttcagagtgaaattcagccttcctgactggcacagc
agtgaacaagttggagagttccttcttgaccaatgcatctgcatacacctgaataacaaa
gctgagaagttctacctgctttgcttcatgactcggaaactctttactttagccaaagaa
ggctgcatggaggacaatccagacagtttaatgaatcaagaggtgctcacctcgggacaa
ctttacctcatgtttttaaaggagaagttggaaacttggttgcagtctgtgaaaatagct
ttggacaagaaagctcagaggtcagctatgacgattaacgcagaaaacatgatgaagatt
cttggcatggggacagatattacaaggatgtttgagtatctccttgctactggcaacctg
cgctctaagacaggtctgggcatgctgcaaagctcaggtctctgtgtggtagcagacaag
ctgaacttcatccgctacctctcccatttccgctgtgtgcacagaggggctgattttctc
aagatgagaaccaccacggtgcgcaagctgctgccggagtcctggggcttcctttgtcct
gtccacacgcccgacggagaaccatgcggtctgatgaatcacatgacagctccatgtgaa
atagtaacacaggcatcgtacacattctccctgccgtccttgctttgctctttgggtggg
atgcttgcagtcgatggcgttgatgcatcacatactgctgtgcaactttctgtaggtgtc
actccagttgatgctgtgccaagccagccctactctgaatgttacccagtttcattagac
ggctccccagtaggctggatagagaaggatcaggctcctggtcttgtggagacactcagg
cacttcaaggcaatgcaagaaaagaagattcccgtttggacagaggtggtccttgtccca
atgacaggaaagcccagcctttacccaggactcttcattttcaccaccccttgtaggatg
atgcgccccgtgcaaaatttggccctgggaaaggaagaattgattggcacaatggagcag
gtcttcatgaacattgctgtgtctgaggatgaaattcagccaggactgaccacgcaccag
gagctctttccccacagcatattaagtgtggtggcaagttttattcccttctcggatcac
aaccagagtccaagaaatatgtaccagtgtcagatgggcaagcagacgatgggtttcccg
cttctgaccttcccataccggtcagacgataagctctaccgacttcagacccctcaaagc
ccactggtgcggccggctatgtatgaccattacgacatggactcctacccgatcggtaca
aatgcagttgttgccgtgatctcctatactggctacgacatggaagatgcaatgatcctg
aacaaggcttcatgggagagaggctttggacatggaagtatctacaaaacgcaacgtatt
gaccttgcggaaaaagtcaagaagggagaggataatctggtatttgggattggtcaggat
aagctgacaactttgcagaatctggatcctgacggcttgccccacattggagccagactt
caatacggggaccctttctatagttacgtgaatctcaacacgggggaaagctttgtgacc
taccacaagaacaaggaaatctgtattgtggataacatcaaagtatgcagcaacgacacc
gggactgggaaattcaggtgtgtctgcatcaccctgagggtcccccggaatccaacgatc
ggggacaaatttgccagccggcacggacagaaaggcatcttgagcagactgtggcctgct
gaggacatgccctttaccgaaagcgggatggtgccggatatcctcttcaaccctcacggc
tttccgtcccgaatgaccattggcatgttaattgagagcatggcgggcaaatccgccgct
ctgcacgggctttgtcacaacgccacgcccttcacgttttccgaggagaactctgctctg
gaatactttggcgagatgctgaaggccgccggctacaacttctacgggacggagcgaatg
tacagcggcgtctcaggagtagagctcgaagcggacatcttcatcggcgtggtgtactac
cagcgcctcaggcacatggtctctgacaagttccaggtgaggactaccggggccagagat
aaagtcaccaaccagcccatcggagggcggaacgttcagggcggcatccgttttggagag
atggagagggacgctctgctggctcacggggcctccttcttgctgcacgaccgccttttc
cactgctccgatcgctcggtgacccacgtgtgcatcgagtgtgggagcctgctttctccc
ctcttgaagcccccgcccgagtggtccgccacacgcatcaggcaacacgtctgcaccact
tgcggccggagcgacaccattgaaacgattgccgtcccgtatgtcttccgcgtctttgtg
gcggaattggcttccattaatgtaaaagtgaaactcagtgtgagttag
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