Zootoca vivipara (common lizard): 118083136
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Entry
118083136 CDS
T07275
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zvi03036
]
118083136 (TRERF1)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
118083136 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2
zf-C2H2_4
Myb_DNA-binding
Myb_DNA-bind_7
zf-C2HE
Zn_SUZ12
zf-met
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
118083136
NCBI-ProteinID:
XP_034967132
LinkDB
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Position
LG3:21803598..21877717
Genome browser
AA seq
1198 aa
AA seq
DB search
MGDQQMYKTSHVVNNNESLYYHQQQQQQQQQHLNSLAPLNHSYGTSAMDATQESPLSPSF
SQETRENIALNAGSKTLGLMDSPRQSSWAHLGSGNHVPVRNNQNVMWGSAGQGDVTDGYE
HLCSQANEVRPQKMTSGVLHKLDSFAQVFANQNLRIQVNNVSQVIQPSAMGGTGDSALRQ
LLSQKPAVEQQPVQRYQQVPQQVHQGFVGTPQKQHMHMMAHQQPLYYDEQQHLAHLQMHP
AMHQGQAHFQQMHSQHLLPQQQLQQDQYYLQQQQQQSQQGQHRLLIHELQQQQQRQCPVQ
TAQYYSIQPMMQHLQQQQQQQMQMQLPAFHRDPDQKPLHETHQYSQDRGHSVQLIQLGAV
PQYFYQDQQQPFRHLYSQSLLQQQPPPGDASQPNHYQSNSKAQALMDSHLGFPLAEGTEG
PAQQDMNSVAGGVPQQPLMPPESIHVDSKGPQPLSPGPMWPQQQVHLPDGRLRSVSPEQS
SIHEKETHSERSETKSKLACTVCLKEFKSLPALNGHMRSHGGMRASPVFRQCSSWEQSTV
EAECLWLSAQDEGESLPQPQHQHQREQLPSEAESFVPIVMPVSVPVKLLSPDPAKQAADS
SAVLKDKPVSDDEMPVLVRMTCSPPCSPNVASPCPSSDLNRKQHQSTANSEESSFKPFQD
KKKYRHRPEPLFIPPPSYNLAASHLGAMLYQSQLRSPRILGDLDSIHDPPPYTPPPMLSP
VRHGSGLFSSVITSAHGASHPQLPLTPLTPTPRILLCQSNSVDGASVPITPGPGEQTIDV
EPHINIGSRFQASIPELEDRGLVGEEDHKATLVWKPGPELEDKDIQQRVTSLLNLCCSSV
LTGGGTNLEYGLHSLFEAKGDVMVALEMLLLLKPARAKSHPLASYHYAGSDQWTPIERKL
FSKALHTYSKDFILVQKMVKSKTVAQCVEYYYTWKKIMHLGRKHRTRLAEVKNECLTSGE
DDELEEEEQAEEDKKSVKEEAEIQNSPEPPSIIAAEPINLPSLQSPTLPATSFTCEMPDC
GAMFNSRPALNGHVRIHGGTNPVTKTRGGSHGAKQKSSSQNDYGPAKNSPAHSTTSGETD
PTTLFPCKECGKMFFKIKSRNAHMKTHRQQEEQQRQKAQKAAVAAEMAATIARTSGPSGH
SLIPLDHLDLIKQVEEADDLSSDVVQELGEVMDGTEVIDPDLLLDEEDTDLLQDDVEL
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcagcaaatgtacaaaacgagccatgttgtcaacaacaacgaaagcttgtat
taccaccagcagcagcagcaacagcaacaacaacacctaaattctcttgcaccgttaaac
cacagctatggaacatcagccatggatgcaactcaggaatctccgctctccccatcgttc
tctcaagaaactagggaaaacatagctttgaatgctgggtccaaaactcttgggttgatg
gattctcctaggcaatccagttgggcccatttgggttctgggaaccacgtcccagtgagg
aacaaccaaaacgtcatgtggggctcagcggggcaaggcgatgtaaccgacggatacgag
catctgtgttcccaagccaacgaggtcaggccgcagaaaatgacgagtggcgttttgcat
aagctggactcctttgcccaagtgtttgcgaaccagaacttaaggatccaggtcaacaac
gtgtctcaggtcatccagccttcagcaatgggcggcactggcgacagcgcccttcggcag
ctgctgtctcagaagcctgccgtggagcagcagccggtgcagagataccaacaggtgccg
cagcaagtccaccagggttttgttggcacgccgcagaagcagcacatgcacatgatggcg
caccaacaacccctctattacgacgaacagcagcatttagcgcatctgcagatgcaccct
gcgatgcatcaagggcaggcccacttccagcaaatgcactctcagcacctgctgccgcag
cagcagctacaacaggatcaatactatctgcagcagcagcaacagcaatcccaacaaggg
caacataggcttttaatacatgagttgcagcaacagcagcagaggcaatgcccggtgcaa
acagctcagtattattcaatacagcctatgatgcaacatttgcagcagcagcagcagcag
cagatgcaaatgcaacttcctgcctttcacagagatcctgaccagaagcctctgcacgag
actcatcagtactctcaggatcggggtcattctgtgcagctcattcagctgggagcagtg
cctcagtacttctatcaagatcagcagcaacccttcaggcatttgtattcacaaagctta
ttgcagcagcagccgccaccaggagatgccagtcagccaaaccattaccagagcaacagc
aaggctcaggcactgatggattcgcaccttggattccccttggcagaagggacggagggt
ccagctcagcaggacatgaattctgtcgctggtggcgtccctcagcaacctctgatgccc
ccagaaagtatccacgtggatagcaaagggccacagccattgtcccctggtcccatgtgg
cctcagcagcaggtccatctgcctgatggaagactccggtcagtttcccctgagcaaagc
agcattcacgaaaaagaaactcatagtgagagatctgaaacaaagagcaaactcgcgtgc
actgtatgcttgaaggaatttaagagtttgccagccctaaatggccacatgaggtctcat
ggagggatgcgggcatctcctgtcttcagacagtgttctagttgggagcagtccacggtt
gaggctgaatgcctttggttgtctgcacaggacgaaggggagagcctgccgcagccgcag
caccaacaccagcgggagcagctgccctccgaggcggagagcttcgtccccatcgtcatg
cctgtgtcggtgcccgtaaagctgctgtcacccgatcccgccaagcaggccgctgacagc
agcgccgtgcttaaagataagcctgtctcagatgatgagatgcccgttcttgtgaggatg
acttgctctccgccatgctcccctaacgtggccagcccctgcccgtcctctgacctcaac
agaaaacagcaccaaagcactgccaactctgaagaaagcagcttcaaaccgtttcaagac
aagaaaaaataccgccacagacctgagcctctgttcataccgccaccttcttacaaccta
gctgcatcccacctgggcgcgatgctgtaccaaagccagcttcgctctccccgcatccta
ggagaccttgacagcattcacgacccccctccttacaccccacctccgatgctcagcccg
gtacgtcatggatctggcctcttcagcagcgttatcacatccgctcatggtgcgtctcac
ccccagctgccgctcactcctttgacgcccactccccggatacttctctgtcaatctaat
agcgttgatggagccagtgtcccaatcaccccaggacctggagaacagaccattgatgta
gaaccgcatattaatattggatcgagattccaagccagtattcctgaacttgaagacaga
ggattggtgggggaagaggatcacaaggcaactttagtttggaaaccagggccagaactg
gaagataaagatatccagcaaagagtgaccagccttttaaatctgtgttgttcaagtgta
ttgactggtgggggaaccaaccttgaatatggcttgcattctctctttgaggctaaagga
gacgttatggtcgctctggagatgctgcttttgttgaagccggcaagagcaaaatcacat
cctctggcaagttaccactatgctggttcagaccagtggacacccattgaaagaaagctg
ttcagcaaagcattacacacatacagcaaagattttattttggtacagaaaatggtgaag
tcgaagacggtggcccagtgtgtggaatactattatacctggaagaaaatcatgcattta
ggacgaaagcacagaacacgcttagcagaagtgaaaaatgaatgcctgaccagcggcgaa
gacgatgaattagaggaagaggagcaggcagaggaggacaagaagtcagtcaaagaggaa
gccgaaattcagaattctcctgagccgccttcaattattgctgctgaacctattaacctg
ccttccttgcaaagccccacactcccagcgacctcatttacatgtgaaatgccggactgc
ggagcgatgttcaactccagaccagctctgaatggccacgttcgcattcatggcggtaca
aaccctgtgacgaaaacccgcggtgggagccacggtgcgaagcagaaatccagctcccag
aatgattacggccccgccaaaaactccccagctcacagtacgacaagtggcgagacagac
ccaactacacttttcccttgtaaagaatgtggcaagatgtttttcaaaatcaaaagccgc
aatgctcacatgaaaacgcaccggcaacaggaggagcagcagcggcagaaagcccagaag
gctgctgttgcagctgaaatggcagctacgattgcgaggacctcagggccctctgggcat
agcttgatacccttggatcatttggacttgataaagcaggttgaggaagccgatgacctc
agcagcgatgttgttcaggaattgggagaggtcatggatggtactgaagtgatagaccct
gacctcttattggatgaagaagacacagatttgcttcaggatgatgtggagctctag
DBGET
integrated database retrieval system
