Zootoca vivipara (common lizard): 118083227
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Entry
118083227 CDS
T07275
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04140
Autophagy - animal
zvi04148
Efferocytosis
zvi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118083227 (VPS18)
04148 Efferocytosis
118083227 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118083227 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118083227 (VPS18)
Membrane trafficking [BR:
zvi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118083227 (VPS18)
Hops complex
118083227 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
DUF2229
zf-RING_UBOX
zf-RING_11
zf-RING_2
zf_RING_Vps8
DUF5600
zf-rbx1
zf-ANAPC11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
118083227
NCBI-ProteinID:
XP_034967346
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Position
LG1:39929906..39941836
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AA seq
974 aa
AA seq
DB search
MASILDQYVDSLSHSASSQQNRASLGIPHTGYVNARLEKETPIFNKQRIDFNPPEKINSL
VVSSNQLCMSLGKDIIFRLDLAKADEPNQVELGRKDEARVHKLFLDHTGSHLIIALNTSE
CLYLNRSAQKVRILSRWKGHLIESVGWNKFLGSEMNTGPILVGTSQGQIYEAEVSVSEGS
LFGTNPDQYFRQIYNLEEEAGPAPVCCLEIERGIDGKCFIIATTRKRLFQFVGKIPEGSE
QQAFGAIFSMPADHLPGFREFPASLGYSEIAFYTPKLRSTPSAFAWMMGNGVLYGSLDYG
RPDSILSDEQVWEYPSDVDAVANKPMNIVLTQFHFLLLFPDRVKAVCTLNGQVVFQDVFL
EKFGSLKRMIKDPAFGQIWIHTEKAVFRYNVQRESRDVWKMYTNINKFDLAKEYCKDRPE
CLDIVLAKEAEYCFQNKRYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLIKKLASL
KPSEKTQTTLLTTWLTELYLNRLGVLEADGSKRDLYEKTRDKFRSFLGSPKNKDCLFNNR
ATIHELLASHGDTEHMVYFAVIMHDYERVIAHYCQHENYNEALEVLSKIRDDVLFYKFSP
VLIQHIPKKLVDAWIEMGKKLDAKNLIPALVNYSQSGSTEQINEAIRYMEFCVSELKETQ
QAIHNYLLSLYALCRPDSLLSYLERAGTYADNIHYDLKYALRLCAEHSHHRACVHVYKVM
EMYEEAVDLALQVDVDMAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEAYNKHIEELKTEMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCAACDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KLSATSQPSKSHHRPKDTDTSSQGKGQLSREQMKADIDDIVAAECVYCGELMIRSIDKPF
IDPQRYEEEMQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcttccattctggaccagtacgtcgactcgctttcgcactcggcttcctcgcagcag
aaccgcgccagcctgggcatcccgcacacggggtatgtgaatgctcgcctagaaaaagag
accccaatttttaacaaacagaggattgatttcaacccccctgaaaagattaatagcctg
gttgtctcttcaaaccagctgtgtatgagtcttggaaaagacattatttttaggcttgac
ctggccaaggcagatgagcctaaccaggtagagcttggacgaaaggatgaagccagagtt
cacaagctctttttggaccacacaggttctcaccttatcattgccctgaacaccagtgag
tgcctctatctgaaccgaagtgctcagaaggtgcggatcctgtcacgctggaaaggtcat
ttgattgaaagtgtgggctggaacaagttccttggctcggagatgaacacgggccccatt
ttggtgggaacatcccaaggccagatatacgaggctgaggtctcggtcagtgaaggcagt
ctcttcggcactaaccctgaccagtattttcgccagatctataacctagaagaggaggca
ggacctgccccagtctgctgcctcgagatagaacgaggaattgatgggaagtgctttatc
attgccactactcgcaagaggcttttccagtttgttggcaagattccagagggatctgaa
cagcaagcctttggagcaatatttagcatgcctgcagatcacctgcctggcttccgcgag
tttccagctagccttggctacagcgaaattgcattttatacacctaagcttcgctccacc
cccagtgcttttgcttggatgatgggcaacggtgtcctgtatggatcgctggactatgga
cgtcccgactctattcttagcgatgagcaggtctgggaatatccatctgacgtagacgca
gtagccaacaagcccatgaatatagtgctcacgcagtttcattttctgctgctgtttcct
gacagagtgaaggctgtgtgtaccctgaatgggcaagttgtcttccaggatgtgttcttg
gaaaagtttggctcgttgaagcgcatgatcaaagatcccgcatttgggcaaatctggatc
cacacagaaaaggccgtgtttcgatacaatgtgcagcgagagtcccgtgacgtgtggaag
atgtatacgaacatcaacaagtttgatctggctaaagagtactgcaaggaccgccccgag
tgcttggatatcgtgctggccaaggaagccgaatattgcttccagaacaagagatacctg
gacagtgcaaagtgttatgcattgactcaaaattactttgaggagattgctcttaaattt
atcgaagccaagcaggaagaggcgctgatggaatttctgattaaaaaactggctagcttg
aagccttctgaaaagactcagacaaccctgctgaccacatggctgacggagctgtattta
aaccgcctaggagtcctggaagcagacggatcaaaacgggacctctacgaaaagacccgg
gacaaattccgcagcttcttgggcagccccaaaaacaaagactgcctgttcaacaaccga
gcaaccattcacgagctgctggcgagccatggggacacggagcacatggtgtactttgcc
gtcataatgcacgactacgagcgggtgatagcccattactgccagcatgaaaattacaac
gaagcactggaagtcctgtccaaaatcagggatgatgtgctcttctacaagttttctcca
gtcttgatccagcacatccccaagaagctggtagatgcttggatcgaaatggggaagaaa
ctggatgccaagaacctcatccccgcccttgtcaactacagccagagtgggagcactgag
cagatcaacgaagccattcgatacatggagttctgtgtgagcgaactgaaggaaactcag
caggccattcataattacctcttgtcgctctatgctctgtgtcgccctgactcgctgttg
tcgtatctggaacgtgctggaacctacgctgacaacatccactatgacctgaagtacgca
cttcggctctgtgcagaacacagccaccaccgggcttgtgtccatgtgtacaaagttatg
gagatgtatgaggaagctgtagatctcgctttgcaggtggatgtagatatggcaaagtcc
tgtgcagacctccctgaagacgatgaggagctgaggaagaagctttggctgaagatcgcg
cgacatgtcgtccaggaagagaaggatgtcaagaaggccatggcctgcctttccagctgc
aacctgctgaagattgaagatgtcctgcccttctttccagactttgtcaccatcgatcac
ttcaaggaagccatctgcaactctctagaggcctacaacaagcacatagaggaattgaag
acggagatggaggaagccacacagagtgccaaaaggatccgggaagatattcaggaaatg
aggaacaaatacggctctgtggaaccccaggagaaatgtgcggcatgtgacttcccgctc
ctgaaccgccctttctacctcttcctctgtggacacatgttccactacgattgccttctg
caggcagtttatccaaacctgcctgcctataagcaggctaaactggaagaccttcaaaag
aagctctcggccacaagccagccctccaaatcccaccaccggcctaaggacaccgatact
tctagccaaggaaagggacagttaagccgtgagcagatgaaagctgacattgatgatatt
gtggcagctgaatgtgtgtattgtggagagctgatgatccggtccattgacaagcctttc
attgatccacagaggtatgaagaggagatgcagagctggctgtaa
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