Zootoca vivipara (common lizard): 118083376
Help
Entry
118083376 CDS
T07275
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118083376 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zvi03021
]
118083376 (SMARCA5)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118083376 (SMARCA5)
Transcription machinery [BR:
zvi03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
118083376 (SMARCA5)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
118083376 (SMARCA5)
RSF complex
118083376 (SMARCA5)
WICH complex
118083376 (SMARCA5)
B-WICH complex
118083376 (SMARCA5)
NORC complex
118083376 (SMARCA5)
BRF complex
118083376 (SMARCA5)
NuRF complex (fruit fly)
118083376 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
RRG8
AAA_14
Motif
Other DBs
NCBI-GeneID:
118083376
NCBI-ProteinID:
XP_034967572
LinkDB
All DBs
Position
LG4:25838158..25864375
Genome browser
AA seq
1048 aa
AA seq
DB search
MSAAGQENENAGSLSAGASVPVAENAGAGAAEGPPGGNAEGADVVDDESPGIQKENQEPD
PTYEEKMQTDRSNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
VGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRA
VCLIGDKDQRATFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGD
QKLVERLHMVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNS
AGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKE
QDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFML
STRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERI
VERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDGI
LERGAKKTAEMNEKLSNMGESSLRNFTVDTESSVYNFEGEDYREKQKMAFTEWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIG
YKVPRNPDLPNASQAQKEEQIKIDEAEPLNEEELEEKEKLLTQGFTNWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLVSVKY
EFVTSDLCEENLLISARNLKSHFLYLNP
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcggggcaggagaacgagaacgccggctccctgtctgccggcgcttcggtt
cccgtcgcggagaacgcgggggcgggcgccgcggaggggccgcccggaggaaacgccgaa
ggagcggatgtagttgatgacgaatctccaggaatacaaaaagagaaccaagaaccagat
cctacatatgaagagaaaatgcaaacagacagatcaaacagatttgagtatctattgaag
caaacagaattgtttgctcatttcattcagcctgctgctcaaaagactccaacttcaccc
ttgaaaatgaaaccaggacggccacgaataaagaaggatgaaaaacaaaatctgctatca
gttggagactaccgccatcgcagaactgaacaggaagaggatgaggagctgttaacagaa
agctcaaagaccactaatgtctgcactcgctttgaagactctccatcatatgtaaaatgg
gggaaactgcgtgattatcaagtccgagggttgaattggctcatttctttgtatgaaaat
ggcatcaatggtatcttagcagatgaaatgggtctgggaaagacactgcaaacaatttct
ctccttgggtatatgaaacactacagaaatatccctggtcctcatatggtattagttccc
aaatcaactttgcataattggatgagtgagtttaagagatgggtgccaactcttcgggca
gtatgtctgataggtgacaaagaccagcgagccacatttgtgcgagatgtcttgttgcct
ggtgaatgggatgtctgtgtaacatcatatgaaatgctcattaaagagaaatctgtgttc
aaaaaatttaactggagataccttgttattgatgaagctcacaggatcaaaaatgaaaaa
tcaaagttgtcagaaattgtgagagagttcaagactacaaatagactactgttaactgga
acaccattacagaacaacttgcatgaactttgggcacttcttaactttttactgccagat
gtctttaattcagctgatgattttgattcatggtttgatacaaacaactgtcttggggat
caaaaactagtggaacggctccatatggtgctacgaccatttctcttacgtcgtattaaa
gctgaagtagagaaaagtttgcctccgaaaaaggaagttaaaatatatgtaggtctcagc
aaaatgcagagagaatggtacacaagaatcttaatgaaggacatagatatattgaattct
gctggaaaactggacaaaatgagattactgaacattcttatgcagttgcgaaaatgttgt
aatcatccatacttgtttgatggagcagagcctggcccaccttacacaacagatatgcat
ttggttactaatagtggcaaaatggttgtcttggacaaactgttgccaaaattgaaagaa
caagattcacgcgtcctaatcttcagtcagatgaccagagtcctagatatcttagaagat
tattgcatgtggcgaaactatgaatattgtaggcttgatggacagacgcctcatgatgag
agacaagcctccattaatgcgtacaatgaacctggaagctcaaagtttgtgttcatgctg
agcacacgagctggtggtttgggaatcaatctggctacagctgatgttgtaatcatttat
gattcagactggaatcctcaagtagatctacaagctatggatcgagcacatagaattggt
caaacaaagactgttagagtattcaggtttattacagacaacactgtagaagaaagaata
gtggaaagagcagaaatgaaacttcgcttggattccatagttattcaacaaggaagactg
gtggatcaaaatctgaacaaattggggaaagatgaaatgttgcagatgattaggcatgga
gctacccatgtctttgcttccaaggagagtgaaattacagatgaagatattgatggtatt
ttggaaagaggtgcaaagaaaactgcagaaatgaatgagaaactctccaacatgggtgaa
agctcactcagaaattttacggtggatacagagtcaagtgtctataactttgaaggagaa
gattatagagagaagcaaaagatggcattcacagagtggattgaaccacctaagcgtgag
agaaaagcaaactatgctgttgatgcttatttcagggaagctcttcgtgtcagtgaacca
aaagcaccaaaagcgccacgccctccaaaacagcctaatgttcaggatttccagttcttt
ccaccacgtttgtttgaactgttggaaaaagagattctttattacagaaaaaccattggg
tacaaggtacctcgtaatcctgacttacccaatgcatcccaggcacaaaaggaagagcaa
attaaaattgatgaagctgagccccttaatgaagaagagttggaagaaaaagaaaagttg
ctaacccaggggttcacaaattggaataagagagacttcaatcaattcatcaaagctaat
gaaaaatggggtcgtgatgacattgaaaatatagcccgggaagtagaaggaaaaactcca
gaggaagtcattgaatattctgctgttttctgggaacgatgtaatgaactccaggatata
gaaaagataatggcacagattgaaagaggtgaagctcgaattcaaaggcggattagtatt
aaaaaggcacttgacacaaagattggcaggtacaaagccccttttcaccagctgaggata
tcatatggcactaacaaaggaaaaaattacacagaagaggaagatcgctttttaatctgc
atgcttcacaagctaggatttgacaaagaaaatgtttatgatgagttgaggcaatgtatt
cgcaattctccccaattcagatttgattggttcctcaagtctagaactgcaatggagctg
caaagacgatgcaacaccttaatcactttgattgaaagagaaaacatggaattagaagaa
aaagagaaggcagagaagaaaaaacggggcccaaagccatctttggtgagtgtaaaatat
gaatttgttacaagtgatttatgtgaagagaacctgttgatttcggcacgtaatttgaaa
agtcattttctgtatctgaatccttga
DBGET
integrated database retrieval system
