Zootoca vivipara (common lizard): 118083457
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Entry
118083457 CDS
T07275
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03030
DNA replication
zvi03410
Base excision repair
zvi03420
Nucleotide excision repair
zvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118083457 (RFC1)
03410 Base excision repair
118083457 (RFC1)
03420 Nucleotide excision repair
118083457 (RFC1)
03430 Mismatch repair
118083457 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zvi03032
]
118083457 (RFC1)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118083457 (RFC1)
DNA replication proteins [BR:
zvi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118083457 (RFC1)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118083457 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
BRCT_2
AAA_14
Rad17
AAA_30
AAA_5
RNA_helicase
AAA_33
RuvB_N
AAA_19
AAA_16
AAA_18
AAA_17
TIP49
PTCB-BRCT
nSTAND3
AAA_7
Zeta_toxin
NPHP3_N
NTPase_1
Motif
Other DBs
NCBI-GeneID:
118083457
NCBI-ProteinID:
XP_034967792
LinkDB
All DBs
Position
LG4:complement(53231536..53276200)
Genome browser
AA seq
1150 aa
AA seq
DB search
MDIRKFFGAVIPRNKHECDTDRKNEKPQNKEGTSGEKSKLKEIKVKNSSHGEDSGHKQVN
KKKRIIYDSDSEEEVQVVKKSKKPPDRKQSSRPDKILKKDPVVYVSETDEEEDFVNKKVA
PKPKENGTSAAIRFGASGASKTDPKPKLKSKPLSPVKLTPTSVIDYFGTGSIQRSEKKLV
SSKRKELSQSRDPTLDDEAVARQLQLEENTELERQLHEDEEFARTLAMLDETPKKKKPRK
DPEEKQITSTVKTSPVEAEKHKQAPKAKPASSTVDTRPYSAKDQVCSESTKTLSQHPESS
VSKEKKDLGNKALPSKPSSKLAVLKQKAESIKLENGTPKEETIKNESRTPKVKSVLPEEA
PRKEKVTPPKSKSVSPEDSEKKRANYQAYRSFLNREGPRALGSKEIPQGDENCFEGLTFV
ITGILESIERDEAKSLIERYGGKVTGNISKKTDYLVKGRDCGAAKSDKALALGTKIIDED
GLFDLIRSMPGKKSKYEVAAEAEAKKAKSKCVKTPPKAEAEKRKISPPTRESEPQKKKVT
PVKDNTVRSPKKQTMEARRGLDFDQNAPEKKDPKGAGSPVQKGSKGGAEVLLWVDKYKPT
SLKTIIGQQGDQSCANKLLRWLRNWHRNISQDKHAKPSKFGVKDDGASSKAALLSGPPGV
GKTTTASLVCKELGLSYVELNASDTRSKNSLKEVVAESLNNTSIKEFCSGTSSSVSTKHV
LIMDEVDGMAGNEDRGGIQELIDLIKHTKVPIICMCNDRNHPKMRSLVHYCFDLRFPRPR
VEQIKGAMMSIAFKEGLKIPPPAMNEVILAANQDIRQVLHNLSMWCAGSKTLTYDGVKED
ASKAKKDLKLGPFDVVRKVFATGEETSRMSLIDKSDLFFHDYSLAPLFVQENYIHVTPAA
AGGNMKKHLMLLSKAADSICDGDLVDRQIRSRQNWSLLPTQAIYSSVLPGELMRGYMKQF
PNFPSWLGKFSSTGKHDRIMQELSMHMSLRTHASKRAVNLDYLSYLRDAIVKPLTCLGTD
GVQDAVAFMDTYCLMKEDVESIMEVTSWGGKPSEFSKVDSKVKSAFTRAYNKEAHLTPYS
LQVVHKANRRAGLSVAEELEAEEIPSENEQETIENDAMIKKMTKTAKQPKRNRDVNKGKA
KKKSKEMVQC
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggagctgtaattcctagaaataaacatgagtgtgacact
gacagaaagaatgagaaaccccaaaataaggaggggacttcaggcgaaaagtcaaaattg
aaggaaatcaaggtgaagaattcatctcatggagaggattctgggcacaaacaggtgaac
aagaaaaagaggataatctatgattcagattctgaagaggaagtccaggtggtgaagaaa
tcaaagaagccgccagatagaaaacagtcttcaagacctgataagattctaaagaaggac
cctgttgtttatgtttcagagacagatgaagaagaggactttgttaataagaaggtcgct
cccaaacccaaggaaaatgggacatctgcggctattcgttttggggcatctggagcatca
aagactgatcccaaaccaaaactgaaaagtaaacccctatctccagtaaaactgacacca
acctctgtaatcgattactttggaactggtagcattcagcgatcagagaagaaactggtg
tcaagcaaacgaaaagaactgtcacaaagcagggatcccacactagatgatgaggctgtt
gccaggcagctacagcttgaagagaatacagagttggagaggcagctgcatgaagatgaa
gaatttgccagaactctggccatgctggatgaaacaccaaagaagaaaaagcctcgaaaa
gatccggaagagaaacagataacttcaacagtcaaaactagtccagttgaagcagaaaaa
cataaacaggctcctaaagcaaaacctgctagttcaactgtggacacaagaccttattct
gcaaaggaccaggtttgctcagaaagtacaaaaacattgagtcagcaccctgagtcttct
gttagtaaagagaagaaggatttggggaataaggcgttgccctcaaagccaagttccaag
ttggctgtgctgaagcaaaaagcagaaagtattaaattagaaaatggaactccaaaagaa
gaaacgataaaaaatgaaagtaggactccaaaagtaaagtcagttttaccagaggaggca
cctagaaaggagaaggttactcccccaaaatctaagtctgtaagtcctgaggactctgaa
aagaagcgagccaactatcaagcttatagaagctttcttaatcgtgaaggcccaagagca
ctcggctctaaggagatcccacaaggtgatgaaaattgctttgaaggcctgacgtttgtg
atcacaggcatcttggaatctattgaacgtgatgaggccaaatctctgattgagcgctat
ggagggaaagtaactgggaatatcagcaagaagacagactatcttgtgaagggtcgtgac
tgcggtgcagccaagagtgacaaggccttagctttagggacaaaaatcattgatgaagat
ggtttatttgacctgattcggagtatgccaggcaagaagtcaaaatatgaagtggcagct
gaagcagaggcaaagaaggcaaaatccaagtgtgtaaaaaccccaccgaaagctgaagcg
gaaaaaagaaaaattagccctccaactagagagagtgaaccccaaaagaaaaaagtcact
cctgtaaaggacaataccgtcagatctcccaagaagcaaacaatggaagcaaggagaggt
ctggactttgatcagaatgcgccagagaaaaaggatccaaagggtgctgggagcccagtt
caaaaaggcagtaaaggcggagctgaggtgttattatgggtggacaaatacaagcccaca
tcccttaaaacaatcattgggcaacaaggcgaccaaagctgtgccaataaactcttacgt
tggcttcgaaactggcacaggaatatttcgcaggacaaacacgcaaaacccagtaagttt
ggagtcaaagacgacggtgctagttcaaaagcagctttgctgtctggccccccaggggtt
ggcaaaacgaccactgcttcactagtttgcaaagaactgggcttgagctatgtggaatta
aatgccagcgacactcgcagtaagaacagcttgaaggaggtggttgccgaatctctaaat
aacaccagcatcaaagagttctgttcaggcacatcatcttcagtcagcacaaagcatgtc
ctaattatggatgaggtggatggaatggctggcaacgaagacaggggaggcatccaggaa
ctgattgacctgattaaacatacaaaggttcctataatttgtatgtgtaatgatcggaat
cacccaaagatgcgttcccttgtccactactgctttgatcttcgctttcccagaccacgc
gtggagcagattaagggtgccatgatgtccattgcctttaaagaggggttaaagattcca
ccaccagcaatgaatgaagtcatcttggcagccaatcaggatatcagacaagttttacat
aatctcagcatgtggtgtgcagggagcaaaactctgacctacgatggtgtcaaagaggat
gctagcaaagcaaaaaaggacctcaaactgggcccttttgatgttgtcaggaaggttttt
gctactggagaggagacatctcgcatgtcccttatagacaaatcagacctcttcttccat
gattactctctcgccccgctctttgtccaggagaactacatccacgtgaccccagctgct
gcagggggtaacatgaagaaacacctgatgttgcttagcaaagcagctgacagtatttgc
gatggcgacttagttgaccggcagattcgcagccgacaaaattggagccttctacctacg
caggccatttattcaagtgtcctgcccggggagctgatgagaggctacatgaaacaattc
ccaaatttcccaagctggctgggcaaattttcatcaacaggaaagcacgaccgtatcatg
caagagctgtcgatgcacatgagcctcaggacacatgcaagcaagagagcagtaaatctg
gactatttgtcatacttacgagatgcaattgtgaaacctttgacttgcctgggaacagat
ggagtgcaggatgctgtagcatttatggatacttactgcttgatgaaggaagatgttgaa
agcataatggaagtaaccagttggggaggcaaacctagtgaattttctaaagttgattcc
aaggttaaatctgccttcacacgagcctataacaaagaggcacaccttacaccatattct
ctgcaagtggtgcataaggcgaatcgacgagcaggattgtcggtggctgaagaactggaa
gctgaagaaatcccatctgagaacgagcaggagactattgaaaatgatgcaatgattaag
aagatgaccaagactgctaagcaaccaaaaaggaacagagatgttaataaggggaaagca
aagaagaaatctaaagaaatggttcagtgctaa
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