Zootoca vivipara (common lizard): 118083576
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Entry
118083576 CDS
T07275
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha isoform X1
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04010
MAPK signaling pathway
zvi04020
Calcium signaling pathway
zvi04144
Endocytosis
zvi04510
Focal adhesion
zvi04540
Gap junction
zvi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118083576 (PDGFRA)
04020 Calcium signaling pathway
118083576 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118083576 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
118083576 (PDGFRA)
04540 Gap junction
118083576 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118083576 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zvi01001
]
118083576 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
zvi04090
]
118083576 (PDGFRA)
Enzymes [BR:
zvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118083576 (PDGFRA)
Protein kinases [BR:
zvi01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
118083576 (PDGFRA)
CD molecules [BR:
zvi04090
]
Proteins
118083576 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
V-set
VEGFR1-3_N_Ig-like
Kinase-like
Motif
Other DBs
NCBI-GeneID:
118083576
NCBI-ProteinID:
XP_034967977
LinkDB
All DBs
Position
LG4:29868901..29922824
Genome browser
AA seq
1090 aa
AA seq
DB search
MIIMGPSQRTILIVGCFLTGPWLASCQSLLPTILPNNDEMVVQLNSPFTLKCSGDSEVSW
QHPIPDGNHTIDLKSEENNSGLFVTVLDVANASASHTGLYTCYYNHSQEEDGEVEGKDIY
VFVPDPAVPFVPTFPEEEFIVITEEEESSTIPCRTSDPNAQVTLMTSEGKIVYAFYDNRQ
GFIGNFSAGSYLCKTTVKGVEFLSGEFVIYIYKATSHLHVEIESPKTVYKTGETIVVTCV
VLDNEVVNLQWNYPGKVKNKGTISLEDIKIPAQKLVYNLTIPDASVKDSGDYECAALHVT
KDFKKTKRVVITVHDKGFIHLEPHFNPMEAVNLHEVKKFIVDVHAYPEPKMFWLKDNVTL
MENLTEIVTKSKQIQETRYQSVLKLIRAKEEDSGFYTFVAQNEDETQRYIFSLLIQVPAL
IRDLVDSHHDSAGQTVTCLAEGTPLPDVEWLVCKDIKKCSNDTSWTLLTNNISDITMETH
LDQKNRVESQVTFQKVEETLAVRCMARNDLGTVARELKLVAPTLRSELTVAAAVLVLLVI
VIISLIVLVIIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGR
ILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARTSEKQALMSELKIMTHLGPHLNI
VNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNYLNRHPEKPKKDLDIFGMNSADEST
RSYVILSFENNGEYMDMKQAETMQYVPMLERKDRSKYSDIQRSLYDRPASYKKKYVSELD
VKNLLSDDHSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDF
GLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYP
GMMVDSMFYNKIKSGYRMAKPDHATSEVYDIMVKCWNSEPEKRPSFYHLSEIVENLLPGE
YKKSYERIHLDFLKSDHPAVTRMRADCDNTYIGVTYKNEDKMKDRESGFDEQRLSADSGY
IIPLPDIDPVSEDELSKRNRHSSQTSEESAIETGSSSSTFVKREDETIEDIDIIDDIGMD
SSELVEDSFL
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcatgggtccttcccaaagaacaatcctgattgtgggctgcttcttgacaggg
ccatggctagcctcttgtcagtctttgcttccaactattctgccaaacaacgatgaaatg
gttgtgcagctgaattcccccttcaccctgaaatgttcgggagacagtgaagtcagctgg
caacatccaatacctgatggcaaccataccatagacctcaaaagcgaggagaacaacagc
ggcctgtttgtgactgtgcttgatgtggcaaatgcttctgcttctcacactggattgtac
acttgctactataatcattctcaagaggaagatggtgaggtggaggggaaggacatctat
gtctttgtgccagatccagctgttccctttgttccgacattcccagaagaggagttcatt
gtcatcaccgaagaagaagagtcctccaccatcccttgccggacaagtgaccccaacgcc
caagtaactttgatgaccagcgaagggaaaatcgtgtatgccttttatgacaacaggcag
ggcttcattggaaacttctccgcaggctcctatctgtgcaagacgactgttaagggagta
gaattcctgtccggtgaatttgtcatctatatttacaaagctacatcacatcttcatgtt
gagatcgaatcccccaagactgtgtataagacaggagaaaccattgttgtaacgtgtgtg
gtcttggataatgaagtcgtgaacttacagtggaattatccagggaaagtgaagaacaaa
ggtacaatttcacttgaggacatcaaaattccagcccagaagctggtttacaacctgacc
attccagatgcttcagtgaaggacagtggagattatgaatgtgctgctcttcatgtgacc
aaagattttaagaaaacgaaaagagtcgtgatcacagttcatgataaagggttcattcat
ctggaacctcattttaaccccatggaagctgtcaatcttcatgaagttaaaaaatttata
gttgatgtgcatgcatacccagagccaaaaatgttttggctgaaggacaatgtgactctg
atggagaatctcacggagattgtcactaagtccaagcagatccaggagacgaggtaccag
agtgtattaaaattaattcgtgccaaggaagaagacagcggattttatacttttgtagca
cagaatgaggatgaaactcaaagatatattttctccctgctcatacaagttccagcttta
attcgagatctggtggatagtcatcacgactctgcggggcaaacagtgacatgcttggca
gaagggacaccactccctgatgtggaatggctggtttgcaaggacattaaaaagtgcagt
aatgacacctcgtggaccctcctgacgaacaatatctctgacattaccatggagactcac
cttgatcagaaaaacagggtagaaagccaggtgacctttcagaaggtggaagaaacactg
gctgttcggtgtatggcgaggaatgaccttggcactgtggcacgggaactgaagcttgtg
gctcccactttacgatcagaactgacggtggctgctgcggtcctagtgttgctcgtaatt
gtaataatttcgctgattgtcctggtaatcatatggaagcagaaaccaagatatgaaata
agatggagagtcattgagtccatcagcccggatggacatgaatacatttatgtggaccct
atgcagctgccctatgactcaagatgggaatttccacgagatggattagtactaggacga
atccttggctctggagcttttgggaaagtagttgaaggaactgcctatggattaagccgg
tcacagcctgtgatgaaggtagctgtgaaaatgttgaagcccactgcgagaaccagcgaa
aagcaggcccttatgtctgaattaaagataatgacccatcttggaccccacttgaacata
gtgaacttgttaggagcttgtacaaagtcaggtccaatttatatcataacggaatattgt
ttttatggagacttggtgaactacctgcataaaaacagggacaactatctgaatcgacat
cctgaaaagcccaagaaggacctggacatctttggaatgaactcagctgatgaaagtact
aggagctatgtaatcctatcctttgaaaacaatggtgaatatatggatatgaaacaagca
gagacaatgcagtatgtgccaatgctagaaaggaaagacagatcgaaatattctgacatc
caaaggtcattgtatgatagacctgcttcgtataagaaaaaatatgtgtcagaactagat
gtgaagaacctcctctctgatgaccattcagaaggcctcactttgttggacctgctgagc
ttcacttaccaagttgcacggggaatggaattcttagcttctaaaaattgtgttcaccgt
gatctggcagcacggaatgtccttctggctcaagggaaaattgtgaagatctgtgacttt
ggtctggctagagacatcatgcatgattcaaactatgtatctaaaggcagtactttcctt
ccagtgaaatggatggcacctgaaagcatttttgacaacctgtatacaacattaagtgat
gtctggtcttatggcattctgctgtgggaaatattttctcttggtggcactccatatcct
ggcatgatggttgattccatgttctataataaaattaaaagtggctaccgaatggcaaaa
ccggaccatgctaccagtgaggtgtatgacatcatggtgaaatgctggaacagtgaaccc
gagaaaagaccttctttttaccacttgagcgaaatagttgagaacctgttgcctggagaa
tacaagaagagctatgagagaattcacttggacttcttgaagagtgaccatcccgctgtc
acacgcatgagagcggactgtgacaacacctacattggagtcacttacaagaatgaagac
aaaatgaaggacagggaaagtggatttgatgaacaaagactcagtgccgacagtggctac
ataatccccctgccggatattgacccagtttcagaagacgaacttagcaaaaggaacagg
cacagttcccagacttccgaagaaagtgccatcgaaactggttccagcagctccacattc
gtaaagcgagaggacgagaccattgaggatattgacatcatcgatgatattggaatggat
tcctcagaactggttgaggacagtttcctgtaa
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