Zootoca vivipara (common lizard): 118083623
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Entry
118083623 CDS
T07275
Symbol
SH3RF1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1 isoform X1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118083623 (SH3RF1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118083623 (SH3RF1)
Enzymes [BR:
zvi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118083623 (SH3RF1)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118083623 (SH3RF1)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118083623 (SH3RF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-C3HC4_4
zf-RING_11
zf-Nse
zf-MIZ
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
118083623
NCBI-ProteinID:
XP_034968095
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All DBs
Position
LG4:complement(42940757..42989466)
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AA seq
866 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVDCSV
DELPSNILLVRLLDGIKQRPRKPGGVVSCTNSLRVQTSTVANCIPKDLQSSQSNQQQRVQ
ARSPPVRGVPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVNGVHGFFP
TNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLAD
KIGIFPISYVEFNTTAKQLIELDKPSGSAGDSGEGTSGASHSNSVQKHPDTKKNTKKRHS
FTSLTMSNKSSQASQNRHSMEISPPVLISSSNPTAAARISELTGLSCSAPSQVHISTTGL
IVTPPPSSPVTTGPSFTFPPEATYQAALGTLNPPLPPPPLLSATIIAPTSAGLPSGAAQK
SVAGSTDQIAHLRTQTRPSVYIAIYPYTPRKDDELELRKGEMFLVFERCQDGWFKGTSMH
TSKIGVFPGNYVAPVTRAVTSASQAKIPVSTAGQTGRVVTMVNTSTAGGTLQKLQGNGVT
MNASAVPTAVVSAAHIQTSPQTKVLMHMTGQMTVNQARNAVRTVAIHSQERPTATVTPIQ
AQSSACLIPAAVIIPHHSVASQQLQPQLSNAATYITAVNINRTNLPLACTTASPGTSASL
DGDANGRTVTAHPGAPASPENTLVAGGITTVSKSDRDGKKEKKGLLKLLSGASTKRKPRA
SPPSSPTLEVEQAAAELALQGAVGPEVPLASSHGRAESCSSDNEISTSMQDVTHRKASSL
DSSIPIAPPPRQPCSSLAPILNECRPVVCERYRVVVSYPPQSEAELELKEGDVVFVHKKR
EDGWFKGTLQRNGKTGLFPGSFVESI
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtcagccttactggatttgttggagtgtcctgtctgcttagaacgccttgat
gcttctgcaaaagtattgccttgtcaacatacattttgtaagcggtgtctgttgggcatt
gtgagctccagaaatgagcttcgatgtccagaatgcaggacgttagtagactgcagtgtt
gatgaacttcccagtaatattttgctggttcgactactggatggcatcaagcagaggccc
cggaaacctggtggtgtggtgagttgcacaaattcattaagggtccagactagcactgtt
gctaactgcattccaaaagacctgcagagttctcaaagtaaccagcagcagagagtacaa
gcacggagtcctcctgttaggggtgtacctcagttaccttgtgccaaagcattatataac
tatgaggggaaagagcctggagatcttaaattcagcaaaggagacattatcatattacgt
cggcaagttgatgaaaattggtatcatggagaagttaatggtgtccatggatttttcccg
accaattttgtccagattattaaacctttacctcaacctccacctcagtgcaaagcactt
tatgactttgaagttaaagacaaggaagcagacaaggattgtttacccttctcaaaggat
gacattctgactgtgattcgccgagtagatgaaaactgggctgaaggaatgttagctgac
aaaataggaatatttcctatttcatatgttgagtttaacacaacagcaaagcaactgata
gaactggacaagccctcgggttcagcaggagactctggggaaggcacatctggtgcatcc
cacagcaattcagttcaaaagcacccggataccaagaagaacaccaaaaaacgccactcc
tttacctctcttaccatgtccaacaagtcttcgcaggcttctcagaatcgtcattcaatg
gaaatcagtcctcctgtcctcatcagctctagcaaccctactgctgcagcccgcatcagt
gaacttacaggcctttcctgcagtgcaccttctcaggttcatattagtactacggggcta
attgtgaccccaccacccagtagcccagtgacaacagggccttcatttacctttccacct
gaagcaacctaccaagctgctcttggtacactgaatccccctctaccaccaccacctctc
ttatctgctacaataattgctccaacctctgctgggctgccttcaggagcggctcaaaaa
tctgtagcgggatcaactgatcaaatagcgcatttgcgcacacagacaagaccaagtgtg
tatatcgctatttatccatatactcctagaaaagatgatgaactggaactgaggaaagga
gagatgttcttggtgtttgaacgttgtcaggatggctggttcaaaggaacatccatgcat
acaagcaaaattggtgtgttccctggcaattacgtggcaccagttacaagggcagtgaca
agtgcctcccaagcaaaaatccctgtatctactgctggtcagacagggagggtggtgact
atggtcaatacttccactgctggaggaacattgcaaaaacttcagggaaatggtgtgaca
atgaacgccagtgcagtaccaacagctgtggtctctgctgcacatatacaaactagtcca
cagaccaaggttcttatgcacatgactggccaaatgacagtcaaccaggctcgcaatgca
gttagaacagttgcaatacacagccaagaaagacccacagccaccgtgacgcccattcag
gctcaaagttcagcatgccttattcctgctgctgtaattattccacaccattctgttgcc
tcccaacagcttcaacctcagctttctaatgctgctacttacatcactgctgtgaatatc
aaccggacaaatctcccattagcttgtacaacagcatctcctggcacttctgcatctctg
gatggagatgcaaatgggagaactgtgactgctcaccctggagctccagcttccccagag
aatacattagtagctggaggaattactactgtcagtaaatcagatagagatggcaagaaa
gaaaaaaagggtttgctaaagttgctttcaggagcatccaccaagcgcaaacctcgagca
tcaccaccatcatcaccaactctggaagttgagcaggcagctgcagagctggccctacaa
ggtgctgtaggaccagaagttccattggcttctagtcatggaagagctgagtcctgctct
tcagacaatgaaatatctacatcaatgcaagatgttactcatcggaaagcaagttctttg
gattccagtattcctatagctccccctccacggcagccctgctcttcattagctccaatc
ctaaatgaatgtaggcctgttgtgtgtgaacgatatagagttgtggtatcgtatcctcct
cagagtgaagctgagcttgaacttaaagaaggagatgttgtttttgtacacaaaaaacgt
gaagatggttggttcaaaggcacattgcagcgaaatggaaaaactggccttttccctggc
agctttgtggagagtatttga
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