Zootoca vivipara (common lizard): 118083686
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Entry
118083686 CDS
T07275
Symbol
PCDH10
Name
(RefSeq) protocadherin-10 isoform X1
KO
K16499
protocadherin delta 2
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118083686 (PCDH10)
Cell adhesion molecules [BR:
zvi04515
]
Cadherins
Protocadherins
118083686 (PCDH10)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118083686
NCBI-ProteinID:
XP_034968281
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Position
LG4:22018296..22074683
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AA seq
1068 aa
AA seq
DB search
MVVLFVFALIWMVQGALSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARRFQTVPNSR
SPYLDLNLETGVLYVNEKIDREQICKQSPSCQLHLEVFLENPLELFRVEIEVLDINDNPP
AFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRTYEITPNGYFSLDVQTQPDGNRF
AELVLSKPLDREQQAVHRYVLTAVDGGQPQQRTGTALLTIRVLDSNDNVPAFEQPVYTVA
LPENSPPGTLVLQLNASDPDEGQNGEIIYSFSSHISARARELFGISPRTGRLEVNGELDF
EESSVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEAAAPGTVVA
LFSVSDRDSEENGQVQCELLQGDAPFRLKSSFKNYYTIVTEGPLDREQPGGDAYTLTVVA
RDLGEPALSTSKSIQVRISDVNDNAPRFSQPVYQVYVSENNVPGAYIYAVSATDRDQGAN
AQLAYSILDSQIQGMSVFTYVSINSENGFLYALRSFDYEQLKEFSFQVEARDAAGGGGGP
DDPDVEQALAGNATVNIVVVDQNDNAPAIVSPLPGRNGTPAREVLPRGAEPGYLVTRVAA
VDADDGENARLTYSIARGNEASLFRMDWRTGELRTARKVPAKRDAQRPYELVIEVRDHGQ
PPLSSTAALQVVLVDSAVERQGAGGGGGGAGAGGGLGPGGAGGPGGEHRPSRSGGGAGGE
TSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLSCCCCCPCCSR
QARARKKKLSKSDIMLVQSSNVPSNPAQVPVEESASFGSHHHNQNYCYQVCLTPESAKTD
LMFLKPCSPSRSTDAEHNPCGAIVTGYTDQQPDIISNGSILSSETKHQRAELSYLVDRPR
RVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNRGQSSGMDLFSNCTEECKALGHSDRC
WMPSFVPSDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTL
ERKELDGLLSNTRAPYKPPYLSPWFQNIHLHLRRLPFNYLRPAEEATV
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtgctattcgtctttgccttaatctggatggtgcagggagccctttcgcagctt
cactacacggtgcaggaggagcaagagcatggcactttcgtggggaatatcgccgaagat
ctgggcttggacattacaaaactttccgctcgccgcttccagacggtgcccaattcgcgg
agcccttacctggacctcaacctggagaccggggtgctgtacgtgaacgagaagatcgac
cgcgagcagatctgtaagcagagcccgtcgtgccagctgcacctcgaagtcttcctggag
aacccgctggagctcttccgcgtcgagatcgaagtgctggacatcaacgacaacccgccc
gccttcccggagcccgacctaacggtggagatctcggagagcgccacgccaggcacccgc
ttccccttggagagcgccttcgacccggatgtgggcaccaactcgttgcgcacctacgag
atcacccccaacggctacttctcgctggacgtacagacgcagcccgacggcaaccgcttc
gccgagctggtgctctccaagccgctggaccgcgagcagcaggcggtgcaccgctacgtg
ctgacggccgtggatggcgggcagccccagcagcgcacaggcacagccctgctcaccatc
cgcgtgctggactctaacgacaacgtgcccgccttcgagcagcccgtctacacggtcgcc
ctgcccgagaactcgccgccgggcacgctggtgctgcagctcaacgccagcgacccggat
gagggccagaatggcgagatcatctactctttcagcagccacatctcggcccgcgcgcgc
gagctcttcggcatctcgccgcgcacgggccgcctcgaggtgaacggcgagctggacttc
gaggagagcagcgtgtaccaggtgtacgtgcaagccaaggacctgggccccaacgccgtg
cccgcccactgcaaagtgctggtgcgggtgctcgacgccaacgacaacgcgcccgagatc
agcttctccaccgtcaaggaggccgtgagcgaggcggccgcgccgggcaccgtggtggct
ctgttcagcgtgtccgaccgcgactctgaggagaacgggcaagtgcagtgcgagttgctg
cagggcgacgcgcctttccgtctgaagagctccttcaagaactactacaccattgtcacc
gaagggcccctggaccgcgagcagcccgggggagacgcgtacacgctgacggtggtagcc
cgggacctgggcgagccggcgctgagcaccagcaagtccatccaggtgcgcatcagcgac
gtgaacgacaacgcgccgcgcttttcgcagcctgtctaccaggtctacgtgagcgagaac
aacgtgcctggcgcgtacatctacgctgtgagcgccactgaccgcgaccagggcgccaac
gcgcagctggcctactccatcctcgacagccagatccagggcatgtcggtgttcacctac
gtgtctatcaactccgagaacggcttcctgtacgccttgcgctccttcgactacgagcag
ctcaaggagttcagcttccaggtggaagcccgcgacgcggcgggcggaggcggaggaccc
gacgaccccgacgttgagcaagctctggccggcaacgcgacagtcaacatcgtagtggtg
gaccagaacgacaacgcgcccgccatcgtcagcccgctgcccgggcgcaatggcacaccg
gcgcgggaggtgcttccccgcggcgccgagccgggctatctggtgacccgcgtggcggcc
gtggacgcggacgacggcgagaacgcgcgcctcacctacagcatcgcgcgcggcaacgag
gccagcctgttccgcatggactggcgcacgggcgagctgcgcaccgcgcgcaaggtgccc
gccaagcgcgacgcgcagcgcccctacgagctggtcatcgaggttcgcgaccacgggcag
ccgccgctctcctccaccgccgccctgcaagtggtcttggtggacagcgccgtggagagg
caaggcgcgggaggcggcggaggcggcgcaggggccggcggggggctgggtcccgggggc
gctgggggtcccggaggagagcaccggcccagccgctcggggggcggcgccggcggcgag
acatccctggacctgactctgatcctcatcatcgcgctgggctcggtctccttcatcttc
ctgctggccatgatcgtgctggccgtgcgctgccagaaggagaagaagctcaacatctac
acgtgcctggccagcgactgctgcctcagctgctgctgctgctgcccctgctgtagccgc
caagcgcgggcgcgcaagaagaagctcagcaagtccgatatcatgctcgtgcagagctcc
aacgtgcccagcaacccggcccaggtgcccgtcgaggagtcggccagcttcggctcccac
caccacaaccagaactactgctaccaggtctgcctcacccccgagtcggccaagaccgac
ctgatgttcctcaagccctgcagcccttcccgcagcaccgacgccgagcacaacccttgc
ggggccatcgtcacgggatacaccgaccagcagcccgacatcatctccaatggcagtata
ttgtccagcgagactaaacaccagcgtgcagagctcagttatctagttgatagaccacgg
cgggtaaacagttctgcattccaggaagcagacatagtaagctctaaggacagtggtcat
ggagacagtgagcaaggagacagcgatcatgacgccactaatcgaggtcaatcctctggc
atggatctcttctctaattgcacggaggaatgtaaagccttgggccactcggatcggtgc
tggatgccctcttttgtcccttctgatggacgccaagctgcggattaccgcagcaatctt
catgtgcccggtatggactctgttccagacactgaagtgtttgaaacaccagaagcccag
ccaggggcagagaggtccttctccacctttggcaaagagaaggcccttcacagcaccctg
gagaggaaggaactggatggactgctgtctaatacacgagcgccttacaaaccaccatat
ttgagtccctggttccaaaacatccaccttcatttaagaagacttcctttcaactacctt
cgtcctgcagaagaagcaaccgtttga
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