Zootoca vivipara (common lizard): 118083847
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Entry
118083847 CDS
T07275
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04510
Focal adhesion
zvi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118083847 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118083847 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
zvi00536
]
118083847 (TNC)
Glycosaminoglycan binding proteins [BR:
zvi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118083847 (TNC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_2nd
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF
NDNF
hEGF
FN3_Tor_3rd
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
118083847
NCBI-ProteinID:
XP_034968698
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All DBs
Position
LG4:complement(72018946..72111397)
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AA seq
2175 aa
AA seq
DB search
MGLHVWVLALVTIALFHQPVHGGLIKRIIRQKREAGLNVTLPEENQPVVFNHVYNIKVPA
GNLCSVDLDSASGDSELKTQTEEDKQYEEHTLNEENQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLRDQCTSGSGCCPSGQPAIGHIDATPYCSGRGNYSNDVCGCICEP
GWKGPNCSEPECPQNCNNRGQCVNGKCICAEGFTGEDCGQLTCPGDCSDQGKCVDGMCVC
FDGYAGEDCGQEVCLVPCSENGKCINGQCICTEGFSGTDCSHSLCLNNCNNHGRCVEEEC
ECDEGYTGEDCSELICPNDCYDRGRCINGTCYCDAGFTGEDCGDMTCPSNCHGNGRCDNG
LCVCYEGFMGDDCADRRCPKDCNKRGRCINGQCVCHAGFLGLDCGEVRCPSDCNNHGRCV
NGQCVCNEKYMGDDCSELRCPNDCNNRGRCIKGQCECDERFMGDDCGDLKCPNDCHNHGR
CINGQCVCNEGFVGEDCGQLQCPNDCNDRGRCVNGKCVCDDAFTGVDCSELRCPKDCNRH
GRCINGQCVCDEGYTGEDCAERTCPNDCNNRGRCINGVCVCNEGFVGDDCRELACVNNCS
GRGRCMNGQCVCEEGFTGVDCSQLQCPKDCNNQGRCFNGVCICDEGYQGQDCSEQSCPNN
CNDLGRCVNGRCVCEEGYVGDDCSDVMPPKDLKVTDVTDKTVNLEWKNENVVTEYLITYI
PTGTGGLDFEFRVPGNHTSATIRELEPGVEYFIRVFAILKNKKSIPISARVATYLPAPDG
LKFKSIKETSVEVEWDPLDIPFSGWEIVFNSLKEEDNVGIRNSLKKPQTSYLQPGLAPGQ
QYNVSLYVVKNQTRGPGLSRVVTTKLDAPSQIEANDVTDTTALITWFKPLAEIDDVELTF
GPKDVPGDRTTIDLSKDDSQYSIGNLKPHTEYEVTLVSRRGDMESDPVTETFVTELDAPK
NLKRLSQTDSTITLEWKNSQATPEAYRIKYAPISGGDHAEVTVPRSDQATTKATLTGLKP
GTEYGIGVTAVKQDKESSPSTINAGTDLDHPKDLEVTDPTETTLTLRWKIPRAKIDRYRL
TYMTPDGRKNEMAIPADSTSHILRSLDAGTEYTINLVAEKGRHKSKPATVVGSTEEEPEL
GNLSVSEVHWDGFQLTWTAGEGAFENFVMQVQEPNQPENGHNITIPGYLRFANLTGLLPS
TLYTITLYGVTRGYRTKPLSVESMTVMKPEVSNLTVWGITPEGFNLSWMTTKGNFESFII
EIIDSNRLLEPMEYNISGHLKAAHISGLSPKTNFIIYLYGVTRGFRTQALSTTATTVTAH
LLSKLTVSDTSSDGLSLMWEAQDVAFDHFLLDVRNTNNQSLDSQQHTVPGDFRSFVLINL
RPNSNYTLQLHGMVDGQSSQTLTTWATTEVEPQLGMLTLTNAKANTFNLSWTTRDGPFAK
LAVNVRDPHLFQESQKLSVSGEAHDTLVSGSVDYTDYDINIQGTTTGGRHTESLISLLMT
EPLPPLENLTVSGINPYGFTVSWMASENAFDSFLIIVVDSGKLLDPQEFLLSGAQRQLTL
RGLITGIGYEVVLYGFAHGRQTRPLSVVALTEAEPEVDNLLVSDATPDGFRLSWTADDGA
FDSFVLKIRDTNMVSDPLELIVPGHERTQDIIGLKEGTGYYIDLYGVTSGQRSQPVNTIA
TTAMGPPKEITFSDITEDSAVVSWTAPRTKVDLFRISYVPVTGGPPNYVTVDGSKSRTKL
AKLIPGVEYIVSIVSVKGFEESEPVSGSLTTALDSPSGLMAVNITDSKALAVWQPAIAAV
DEYIISYVTEGEHEMTQSVSGNTVEYDLTGLRPASEYTLRIYARKGPQKSTVISTKFTTD
LDAPRDLTATDVQFETAQLTWKPPRASVTGYLLIYESIDGKVKEVILGPESNSYSLSELS
PSTQYTVKLQALNRNLKSKIIQAIFTTTGLLYPYPRDCSQALLNGETASGLYTIYLNGNK
SQPTEVFCDMSSDGGGWIVFLRRQNGEQEFYQNWRTYEAGFGNPSGEFWLGLDRLHKITS
QGQYELRVDLRDHEETAYALYDKFFVGDARSRYRLRVEGYSGTAGDSMTYHNARFFSTYD
KDHDAAITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKL
RPYSFRNLEGRRKRA
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgggcctccatgtttgggtactggccttggtgaccatcgctttattccatcaacccgtt
catggtggactcatcaaaagaattattcggcagaagagggaggctggactcaatgtcaca
ttgccggaggagaaccagcctgtggtctttaaccatgtctacaatattaaagtccccgca
ggcaacctctgctctgtggacttggactcagcaagtggcgactcagaactcaagactcag
actgaggaggacaagcaatacgaggagcatacattgaatgaggagaaccagattgtcttc
acacacaggataaacatcccacggcgggcttgtggctgtgcagcagcccctgatatcaag
gatctcctaagtaggctggaggaactggaggggctggtgtcctctctgcgagaccagtgc
accagtggatccgggtgctgccccagtggacaaccagcaataggtcacattgatgctact
ccctactgcagtggacggggaaactacagtaatgatgtctgtggctgcatctgtgaacct
ggttggaagggccccaactgttctgaaccagaatgtccccagaattgcaacaacagaggc
caatgtgtcaatggcaagtgcatttgtgctgaaggcttcacaggggaggactgtgggcaa
ctcacatgccctggggactgcagtgaccaaggcaaatgtgttgatggcatgtgtgtgtgt
tttgatggctatgctggggaggactgtggccaggaagtttgcttggtgccatgcagtgag
aatggcaaatgcataaatgggcagtgcatctgcacagaaggcttcagtgggacagactgc
agccactccctgtgcctcaataattgcaataaccatgggcgctgtgtagaggaggagtgt
gagtgtgacgaaggttacactggagaagactgcagtgagcttatttgccccaatgactgc
tacgaccgtggccgttgcattaatgggacctgctattgcgatgctgggtttactggagaa
gactgtggggatatgacttgtcccagcaactgccacgggaatggtcgttgtgacaatggt
ttgtgtgtatgctatgaagggttcatgggggatgactgtgccgaccggaggtgccccaaa
gactgcaacaaacgcggccgttgcattaatggacaatgtgtgtgccatgcgggtttcctg
ggccttgactgtggagaagtgagatgccccagtgactgcaacaaccacggtcgctgtgta
aatggccagtgcgtatgtaatgaaaagtacatgggggatgactgcagtgaactgcggtgc
cccaatgactgcaacaaccgtggccgctgcatcaaggggcagtgtgagtgtgatgagagg
tttatgggggatgactgcggagacttgaaatgccccaatgactgccacaaccatggaagg
tgtatcaatgggcagtgcgtgtgcaatgagggctttgtgggtgaagactgtgggcagctg
cagtgccccaatgactgcaacgaccggggacgctgcgtcaatggcaagtgtgtgtgtgat
gacgccttcactggggtggactgcagtgaactgcggtgtccaaaagactgcaacaggcat
ggtcgctgcatcaatggccagtgtgtgtgtgatgagggctacacaggggaggattgtgct
gaaaggacctgccccaatgactgcaacaaccgtgggcgctgcatcaatggtgtgtgtgtg
tgcaatgaaggctttgttggggatgactgccgagaactggcctgtgtgaacaactgcagt
ggccgaggccgttgcatgaatgggcagtgtgtttgtgaagagggcttcaccggggtagac
tgcagccaactgcagtgccccaaagactgcaacaatcaagggcgctgcttcaatggagtg
tgcatatgcgacgagggataccagggacaagattgcagtgaacagtcctgccccaacaac
tgcaacgatcttggtcgctgtgtcaatggacgctgtgtctgtgaagaaggctatgtaggc
gatgactgttctgatgtaatgcctccaaaagatctgaaagttacagatgtgactgacaag
actgtcaacctggaatggaagaatgaaaatgtggtcactgaatacctcatcacctacatc
cctaccggaactggtggcttagactttgagttccgagtgcctgggaaccatacgtcagcc
accatccgggagctggagcctggtgtggaatacttcatccgtgtttttgccatcctgaag
aacaagaagagtatcccaattagtgcccgggtagccacttatttgcccgctccagatggc
ttgaagttcaaatctattaaagagacatcagtggaggtagagtgggaccccctggacatc
ccattcagtggatgggagattgttttcaacagcctgaaagaggaagacaatgtgggaatc
aggaacagtctaaagaagcctcaaacatcgtatttgcaaccaggcttggcaccaggacaa
caatataatgtgtctctttacgttgtgaagaatcaaaccagaggacctggcctctccagg
gtagtaacaacaaagcttgatgcacccagccagattgaggcaaatgatgttacagacact
acagcactgatcacatggtttaaaccattggctgagattgatgatgttgagctgactttt
gggcccaaggatgtaccgggagaccgaacgaccatcgacctctccaaggatgatagccaa
tactctattgggaatctgaaaccacacaccgaatatgaggtgacactagtgtcacgacgt
ggggatatggagagtgaccctgtgacggaaacctttgtcacagaactggatgctccaaaa
aatctgaaacgcctgtctcagacagatagcaccatcaccctggaatggaagaacagccag
gcaacacctgaagcttacagaattaagtatgcccccatttctggtggagatcatgctgaa
gtcacagtacccagaagtgaccaagccacaaccaaagctacactcacaggtctcaagcca
ggaacagaatatggcattggagtgacagctgtgaagcaggacaaagagagctctccttcc
actattaatgctggaactgatctggatcatcccaaggacttggaagtcactgatcctacc
gagacaactctcactttgcggtggaaaataccccgggctaaaattgatcgctatcgcctt
acttacatgacccctgatgggaggaagaatgaaatggcgattcctgccgatagcacatct
cacattctaaggtccctagatgctgggacagagtacaccatcaaccttgtggcagagaag
ggcaggcacaagagcaagcctgcaacagtggttggctctactgaagaagagcctgagctg
gggaatttatcagtctcagaggttcactgggatggattccagctcacctggacggcagga
gaaggggcctttgagaactttgtcatgcaggtgcaggagcctaaccagccagaaaatgga
cataatatcaccatcccaggctatttgcgatttgcgaatcttactggcctcctgccaagc
actctttacactatcactctctatggtgtgactcggggctacagaaccaagcccctttca
gttgaatccatgacagtgatgaagcccgaagtcagcaacttaacagtttggggcatcacc
cctgaaggcttcaatctctcctggatgaccaccaaaggaaacttcgagagctttatcatt
gaaattattgattccaacaggttgctggaacccatggaatacaacatctcaggccattta
aaggctgctcatatctcagggctgtcccctaaaactaatttcattatctacctctatgga
gttactcgtggtttccgtactcaggcattaagcactacagctactacagtaactgcacat
ctccttagcaaactcacagtttcagatacttcctctgacggcctgtccctcatgtgggaa
gcgcaggacgttgcctttgaccatttcctcttagatgttagaaacaccaacaaccagtct
ctggactcccagcagcacacggtgccgggggactttcggagctttgtcctcatcaatctc
agaccgaactctaattataccctccagcttcatggcatggttgatgggcaaagtagccag
accttgacaacatgggctaccacagaggtcgaaccacagctgggcatgcttacactcaca
aatgctaaggccaacacattcaacctctcctggaccacaagagatgggccttttgcaaag
ttggctgtaaatgttagagatccccatttgttccaggagtctcagaagctttcggtgtca
ggggaggctcatgacactctcgtctcaggctcagtagattatactgattatgacattaac
attcagggcacaaccacaggcgggagacacactgagtctctcatctctttgttgatgaca
gagcctttgcccccactggaaaacctcactgtctcaggcattaatccatatggctttaca
gtgtcctggatggcatcagagaatgcctttgacagctttctaataatcgtggtggattct
ggcaaactgctggacccccaggagttcctcctctcaggagcccagcgtcagctgacactt
agagggctcataactggcattggctatgaggttgtgctttatggttttgctcatggtcgc
caaactaggcccttaagtgttgttgctctaacagaagcagaacctgaagtggacaacctt
cttgtgtcagatgcaacccctgatggctttcgtctgtcttggacggcagatgatggagcc
tttgacagttttgttcttaaaataagggacaccaatatggtatcagaccctctggaacta
attgtaccaggccatgaacgcacccaagatataatagggctgaaagaaggcacgggatat
tacattgatctctatggagttaccagtggacaacgttcccaacctgtaaatacaatcgct
acaacagcaatgggacctcccaaggaaattacattctctgatattaccgaagactcagct
gtggtcagttggacagccccacggacaaaggtggacctcttccggattagctatgttcca
gttacaggaggtccccccaattatgtgacagtagatggaagcaagagtagaactaaactg
gcaaagctgatccctggcgtggagtacattgtcagtatcgtctctgtcaaaggatttgaa
gaaagtgagcctgtttctggatctctgaccacagctttggatagcccatcagggctaatg
gcagtgaacatcactgattccaaagcactggctgtttggcaaccggcaattgctgctgtt
gatgagtacatcatttcctatgttactgagggtgagcatgaaatgactcagagtgtctca
ggcaatactgtggaatatgatctcactggcctccgcccagcctctgaatatacactccgg
atctatgccaggaagggaccacagaaaagcacagtcatatccaccaaattcactacagac
cttgatgctccaagggatctcactgcaactgatgttcagtttgaaacagcacagctaaca
tggaagccccctcgtgcctctgttacaggttacctcttgatctatgaatcaattgatggc
aaagttaaggaagttatcctgggacctgagtcgaattcctacagcttgtcagagctgagt
ccatccacccagtacacagtgaaattacaggccctgaaccggaatttgaagagcaagatc
atccaagcaatattcaccacaactggactcttgtacccttaccccagagactgctcccaa
gctctactgaatggagaaacagcctctggcctctacacgatttatctaaatggcaacaag
tctcagcctacagaggtgttctgcgacatgagttctgatggaggcggatggattgtgttt
ctaagaaggcagaatggagagcaggaattctaccagaactggaggacttatgaggctgga
tttggaaatcccagtggtgaattctggctaggtctggacaggctccacaaaatcacttcc
cagggccagtatgagctgcgggtggatttgcgtgaccatgaagaaactgcctatgccctc
tatgacaagttttttgtcggtgatgccaggtctcgctaccggctgagagtggaaggatat
agtggaacggcaggcgattccatgacctatcacaatgcacgcttcttttccacctacgac
aaggaccatgatgcagcaatcactaactgcgctttatcatacaaaggggctttctggtac
aagaactgccaccgtgttaacctgatgggtagatatggggacaacaaccacagccagggc
gtcaactggttccactggaaaggtcatgagcactccatccagtttgcagagatgaaactg
cgaccatacagctttaggaatcttgaagggagacgaaagagagcatga
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