Zootoca vivipara (common lizard): 118084021
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Entry
118084021 CDS
T07275
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118084021 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118084021 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118084021 (PCDH7)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118084021 (PCDH7)
Cell adhesion molecules [BR:
zvi04515
]
Cadherins
Protocadherins
118084021 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Cadherin_2
Mid2
LYRIC
TMEM154
KIAA1549
SusE
Motif
Other DBs
NCBI-GeneID:
118084021
NCBI-ProteinID:
XP_034969133
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Position
LG4:complement(34306451..34722456)
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AA seq
1258 aa
AA seq
DB search
MWKMRTLLGFVQCCYCCCCFLLLLPPPLWVSLAAAKQVLRYRLAEEGPADIRIGNVASDL
GIVTGSGEVTFSLESGSDYLKIDNMTGELSTTERRIDREKLPQCQMIFDENECFLDFEVS
VIGPSQSWVDLFEGRVIILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRN
GIERYELLQEPDGGRRGGGSSASATSDSALYPRGGKRRQEADGAARSSVFELQVADTPDG
EKQPQLIVKGALDREQRDSYELTLRVRDGGDPARSSQAILRVLITDVNDNSPRFEKSVYE
ADLAENSSPGTPILQLRAADSDVGVNGQIEYVFGAATESVRRLLRLDESSGWLSVLHRID
REEVNQLRFTVMARDRGQPPKTDKATVVLNIRDENDNVPTIDIRKIGRIPLRDGVASVAE
DVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASEGEGEPQNKRKYFLHTSAPL
DYEAVRDYNVVIVAVDSGSPSLSSNNSLLVRVGDTNDNPPVFSQAVLEVSFPENNAPGER
VATVIATDADSGKNAEIAYSLEPSPLSAESPGGLFTIDPDSGDVRVQAVLDREQRDTYEF
QLTARDKGVPSLQGSTTVVVRVADRNDNEPRFMQDVFTFYVKENLQPNSPVGMVTVMDAD
KGRNAQLSLSIQPGDQAQGAPGIFSIENDTGTIYSTVSFDRELQTSYTFKVKAVDGGEPA
RSATATVSLFVMDENDNAPVVTSPANSSYTVLPPSSNVRSVVTTVQAKDADAGQNAELSY
SIVGGNPFKLFEIDPSSGVVSLVGKLAPKHYGLHRLVVQVNDSGQPPQSTTALLHVFVNE
SLANATVVESQVARSLHTPLAHDIAGDPSYELSKQRLSIVVGVVAGIMTVVLLILVVVMA
RYCRSKGKHGGYEAGKKDHEDFFTPQQHDKAKKPKKDKKGKKQGKQPLYSSIVTVEASKP
NGQRYDGVNEKLSGDSPSMSRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKH
QAVQELPPANTFVGAGDNISIGSDHCSEYSCQASSKYSKQPFRRVTFSVVSQPQDPHQGS
LQSCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDV
ALTGKCTRECDEYGHSDSCWMPVRTSPERKQKSQPKLSTFMPVDERGSQEKLANGEASLM
GDRNRNLLNKKLTSSYETFSAASFSKSEEANPEDIPLTQTGEYKPSPVNTLTRREVYL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagatgcggacgctcctgggctttgtgcagtgctgctactgctgctgctgcttc
ttgctcttgctgccgcctccgctttgggtcagcctggcggcggctaagcaagtgctaaga
taccggctggccgaggaaggacctgccgacattcgcatcggcaacgtggcttcggacctg
ggcatcgtgacgggctcgggcgaggtgacgttcagcctggagtccggctccgactacctg
aagatcgacaacatgacgggcgagctgagcaccaccgagaggcgcatcgaccgcgagaag
ctgccgcagtgccagatgatcttcgacgaaaacgagtgcttcttggacttcgaggtgtcc
gtgatcggcccgtcgcagagctgggtggacctcttcgaaggccgggtgatcatcttggac
atcaacgacaacacccccaccttcccctcccccgtgctcaccctcaccgtcgaggagaac
cgccccgtgggcaccctctacctgctgcccactgccaccgacagggacttcgggcgcaac
ggaatcgagcgctacgagctgctccaagagcccgacgggggccgacggggcggggggagt
tcggcttccgccacctccgacagcgccctctaccccaggggcggcaagaggaggcaagag
gccgacggcgcggcccggagcagcgtgtttgagctgcaggtggcggacacccccgatggc
gagaagcagccccagttgatcgtcaaaggggcgctggatcgggagcagcgggactcgtac
gagttgactctgcgggtgcgcgacggcggagatccggcgcgctcctcgcaggccatcttg
cgagtgcttatcaccgacgtgaacgacaacagcccccgcttcgagaagagcgtctacgag
gccgacctggctgagaacagcagccccggcaccccgatcctgcagctgagggcggcggac
tccgacgtcggggtgaacggccagatcgagtacgtcttcggggcagccaccgagtcggtg
cgccgcctgctgcgcctggacgagtcgtcgggctggctcagcgtgctgcaccgcatcgac
cgcgaggaagtgaaccagctccgcttcaccgtcatggccagggaccgcgggcagcccccc
aagacggacaaggccacggtggtgctcaacatccgcgacgagaacgacaacgtgcccacc
atcgacatccgtaagatcgggcgcatcccgctgcgcgacggcgtggccagcgtggccgaa
gacgttctggtggacacccccatcgccctggtgcaagtgtccgaccgggatcagggcgag
aacggcgtggtgacctgcaccgtggtgggcgacgtgcctttccagctcaagccggccagc
gaaggtgaaggggagccccagaacaagcgcaagtatttcctgcacacctcggcgcctctg
gactatgaggccgtgcgagactacaacgtggtcatcgtggccgtggactcgggcagcccc
agcctgtccagcaacaactccctgctggtgcgcgtcggggataccaacgacaacccgccc
gttttcagccaggccgtgctggaggtatccttcccggagaacaacgctcccggagagcgg
gtggccacggtgatagccacggacgccgacagtggcaagaacgccgagattgcctattcc
ctggagccttccccgctctccgccgagtctcccggaggcctcttcaccatcgaccccgat
tccggggacgtgcgagtccaggccgtcctggatcgcgagcagagggacacctacgagttc
cagctgacggcccgggacaaaggggtaccgtcgctgcagggctccaccacggtggtggtg
cgcgtggccgaccgcaacgacaacgagccgcgcttcatgcaggatgtgttcaccttctac
gtcaaggagaacctgcagcccaacagcccagtgggcatggtgacagtgatggacgccgac
aaggggcgcaacgcgcagctcagcctctccatacagcccggggaccaagcgcaaggcgcg
ccgggcatcttctccatcgagaacgacacgggcactatctactcgacggtctcgttcgac
cgcgagctgcagaccagctacaccttcaaggtaaaggccgtggatggaggagagccggcc
cgctcggccacggccactgtgtcgctgttcgtcatggatgagaacgacaacgcgcccgtg
gtcacgtctccggccaacagctcctacacggtgctgccgccgtccagcaatgtgcgctcc
gtggtgaccacggtgcaggccaaagacgcggacgctggccagaacgcagagctgagctat
agcatcgtgggcggcaacccgttcaagctgttcgagatcgacccgtcgagcggcgtcgtg
tctctggtgggcaagctggcgcccaagcactacggcctgcaccgcctggtggtgcaggtc
aacgacagcgggcagcctccgcagtccaccacggcgctgctgcacgtcttcgtcaacgag
agcctggccaacgccaccgtcgtggagagccaagtggcgcgcagcctgcacacgccgctg
gcgcacgacatcgccggcgaccccagctacgagttaagcaagcagcggctcagcatcgtc
gtgggcgtggtggccggcatcatgactgtggtcctgctcatcctggtggtcgtcatggcg
cgctactgccgctccaagggcaagcacggcggctacgaggccggcaagaaggaccacgag
gacttcttcacgccgcagcagcacgacaaggccaagaagcccaagaaggacaagaaaggc
aagaagcaaggcaagcagcccctctacagcagcatcgtcacggtcgaggcttccaagccc
aatgggcagcgctacgacggcgtcaacgagaagctctccggggacagccccagcatgagc
cgctaccgctccgtcaacggcgggcctggcagcccggatctggccaggcattacaaatcc
agctcgcctttgcccacggtgcagctgcacccgcagtcccccaccgccgggaaaaaacac
caggccgtccaggaactgcccccggccaacaccttcgtaggcgctggggacaacatctcc
atcggctcggaccactgctccgagtacagctgtcaagccagcagcaagtacagcaagcag
ccatttcgtagagtgacgttttcagttgtgagtcagcctcaggacccacatcaagggtca
ttgcagagttgctatgacagcggtctggaggagtcagaaacaccaagcagtaagagttct
tcagggccgcggctgggtgcccttccactcccagaggacaactacgaaaggactacgccg
gatggcagtgttggtgaggcagagcatatggaaaatgattcaagacctttaccagatgta
gccctgactgggaagtgcactcgggaatgtgatgaatatggccattcagactcgtgctgg
atgcctgtccgcacttcgcccgaaaggaagcagaagagccagccaaaactctccactttc
atgcctgttgatgaacggggcagtcaagagaagctggccaatggagaagcctccctcatg
ggtgaccgcaacagaaacctccttaataaaaagttgacctcatcctatgagaccttcagt
gcagctagtttcagcaaaagtgaggaagccaacccagaggatattcccctcacacagaca
ggggaatacaagccatctcctgtcaacactttaactagaagagaagtttacctttag
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integrated database retrieval system
