Zootoca vivipara (common lizard): 118084139
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Entry
118084139 CDS
T07275
Symbol
PCDH11X
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118084139 (PCDH11X)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118084139 (PCDH11X)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118084139 (PCDH11X)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118084139 (PCDH11X)
Cell adhesion molecules [BR:
zvi04515
]
Cadherins
Protocadherins
118084139 (PCDH11X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Fibulin_C
K319L-like_PKD
Cadherin_4
TMEM154
DUF6249
Big_9
Motif
Other DBs
NCBI-GeneID:
118084139
NCBI-ProteinID:
XP_034969370
LinkDB
All DBs
Position
LG4:complement(89385673..89491224)
Genome browser
AA seq
1034 aa
AA seq
DB search
MDLLSRTYLLAALLTCIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSP
LQFKLVYKTGDVPLVHVEENTGEIFTTANRIDREKLCSGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSALDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQVLDREQKDTYVMKIKVEDG
GNPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPESAPVGTSVSQLHATDADLGSNAQI
HFYFSSQLTTLAKRLFAIDNTTGLITIKEPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNIPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDSELNGKVTCYTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPVIGLSIPENNAPGTQLTKISATDADSGRNAEISYMLGLDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGKDNFIIDPLTGVIRPNITFDREQQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVMPSSNYSYDLVPITTSPGSVVTKVFAIDND
TGMNAELRYSIIGGNSRGLFMIDQLTGNVTLKEKVISADHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNGSFVQELVRRNMETPVGQNVGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKSKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGS
IHTRQGDIRHHQTG
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctttccaggacctacctcttggcagccttattaacctgtatcgtgtttcag
tccggtgcccaggagaagaattatacggtgcgggaggagttgccagaaaatgtcctaatt
ggcaatttgcttaaggacctcaacttgactctggaccctgatgtgcccctttcgtcaccc
ctgcagttcaagcttgtgtataagactggggatgttccgctggtgcacgtggaggagaat
actggagaaatattcaccactgccaaccgcattgaccgggaaaagctctgctctggcata
tttagtgagaaccgctgtttctatgaggtggaagttgctgtcctgcccgatgaagttttc
cgactggtcaagatcaggttcctgattgaggatataaatgacaatgctcctctttttcca
tcaacggtcatcaacatctctatccctgagaacacagccatcaattcccggtattctgtc
ccatctgctcttgatcctgacattggagtgaacggcattcagcactatgaactccttaag
cctaaaacagctccgaaaaggacctttggatccattacaaatgaacagggtcaaaatgta
tttggacttgatataattgagacgccggagggggacaagtggccccagttgatagtacag
caggtacttgacagggagcagaaggatacctatgtgatgaaaattaaagtggaagatggc
ggcaaccctccacgatccagcactgctattctccaagtaacagttactgatgtgaatgac
aaccgcccagtgttcaaggagaatgatattgaagtcagtgttcctgaaagtgcccctgtg
ggcacctctgtctctcagcttcatgctactgatgccgatctgggctcaaatgcccagatc
cacttctactttagcagccagctcactaccttggccaaaaggctgtttgccattgataac
accacaggtctcatcaccatcaaggaaccactggaccgggaggaatctccagtacacaag
ttaacagtcttagcaagtgatggcagttcaacaccttcaagagcaacagtgacagtgaat
gtcacagacattaatgataacatcccatcaatagacacgaggtacattatcaacccggtg
aatgggactgtgcttttgtcagagaaagcaccactcaatactaaaattgccctcattact
gtaatggataaggattctgagcttaacggcaaagttacctgctacactgaccacgatgta
ccattcaggttaaagcctgtgtttgataatcagtttctgctggagacagccacattcctc
gactacgaggccacccgggaatatgccattaaaatagtggcttctgattcaggaaaacca
cctttgaaccagtctgcaatgttgctcatcaaaatcaaagatgagaatgacaatgcacca
gtgttcacacagcctgtcattggactgtctatccctgagaataatgctcctggcacccag
ctgaccaagattagtgctacagatgcagatagtgggcgcaatgctgaaatcagctacatg
ctgggcttggatgcaccacccatcttcaacctggatcgccgtacaggcattctgacagca
gtgagaaagctggacagggaaaaacaggacagatactcattcactgtgctggcgaaagat
aatgggatgccacccttacagaccaatgctactgtgacagtttcagtcttggaccagaac
gacaacagccctgccttcacccataacgagtataatttctacgtaccagaaaacctaccc
atgtatggcactgttgggctgatcactgtgacagacgcagactccggagagaacgcagcc
gtgaccttgtctatattgaatggcaaagataatttcattattgatcccctcactggagtc
atacggcctaatattacctttgacagggagcagcaaggttcttatacctttcaggtgaag
gctgtggatggagggaggctgcaacgttcatcaactgccaaggtgaccatcaatgtggtt
gatgtgaatgacaacaggcctgtttttgtcatgccttcatctaactactcgtatgacttg
gttccaataaccaccagcccaggctctgtagtcacaaaggtgtttgccattgacaatgat
acagggatgaatgcggagcttcgctatagcattattggtgggaattcacggggattgttt
atgattgaccagttaacaggcaatgttactttgaaagagaaggtcatatcggcagatcat
gggttacacaggctagttatcaaagtcaatgatttaggacagcctgagtcactatatact
atagcactggtgcatttgtttgtgaatgaaactgtcaccaatggatcctttgtccaagag
ttagtgcgccgaaacatggaaactccagttggccaaaatgttggggatggtgagataacc
ccacagacgaatgactatgtcaagatcataattgctatcattgcaggtaccatgacagta
atactggtcatctttgtgactgccctggtgcgatgccgtcaaacacccaggcacaaggtt
gtccagaaaagcaagcagagtggtgagtgggtttctccaaaccaagaaaaccgtcagatc
aaaaagaagaagaagaagaagaagcgctctcccaaaagccttcttctcaactttgtgacc
atcgaagaatctaagcctgatgatcctggccatgaacatatcaatggcactctggacatt
cccgtggagctggaagaacagactatgggaaaatataactgggccaccacaccaacaacc
tttaagcctgacagcccagatttagcaaagcactacaagtctgcctcaccacagcccact
ttccaaataaaacccgagactccagtgccaccgaagaagcaccatgtcattcaggaactg
cctctggataacaccttcgtggtgggctgcgattcactctccaagtgctcctccagcagc
tcagacccttacagcgtctctgaatgcagctgtcaaggagggttcaagactccaggctcc
atccacaccagacagggagacatcagacatcatcagacagggtga
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