Zootoca vivipara (common lizard): 118084688
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Entry
118084688 CDS
T07275
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zvi03009
]
118084688 (DDX10)
Enzymes [BR:
zvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118084688 (DDX10)
Ribosome biogenesis [BR:
zvi03009
]
Eukaryotic type
90S particles
Helicases
118084688 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
SNF2-rel_dom
PAS_11
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
118084688
NCBI-ProteinID:
XP_034970311
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All DBs
Position
LG5:19498432..19655890
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AA seq
850 aa
AA seq
DB search
MEKSRGTFGGPGPDPVRNFERWKKNYAKRKDRLRQQRQKQKRPAWEVEKEGIARLQQSYS
QINANEVVRFSDFPLSKKTLKGLQEAQYRMVTEIQRQTIGLALQGKDVLGAAKTGSGKTL
AFIVPALEILYRQQWTPMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSAGLIIGGKDL
KQESERIHNINILICTPGRLLQHMDETSYFHASNLHMLILDEADRILDMGFADTMNAIIE
NLPEMRQTLLFSATQTKSVKDLARLSLKDPEYIWVHEKAKFSTPATLEQNYVVCELHQKI
NMLYSFLRSHLNKKSIVFFASCKEVQYLFRVFCRLRPGLPILALHGKQQQMKRMEVYTDF
VRKKSAVLFATDLAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLLS
SEEKGMMQQLSQKKVPINNIKINPEKLMDIQKKMQSFLAQDQELKERAQRCFVSYLRSVY
LMKNKEVFDVFKLPIAEYALSLGLAVAPRVRFLQKLQKKTPENEPEKEGPLQQTDEPQNA
PFSVTNDDVERCRALFSETAVLGGDEDIELSSKDSETEDDASQAQTETEEEPIAVKGSEA
ERLQFFEESNSDDDDTKDLDVLTVKRRNVFGLEPGEKIAPSTSDSKPKKKITKTKEAKKV
LKRKFKVNTKIVFTEDGELIQQWPPAQKSVHDEAEDDDDSGGISLNKAKERLQEEDKFDK
EEYRKKIKEKHREKRLKEKAARREARKKNSKVEEECVAFLDRSESDDDFDPSILPDPDRY
TDSDQEADPESHDGPGMDKQRSGGSTSAVETVPRRKKIKLSKEDSFATLDTGLSLAEDEA
LVLHLLNNQS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaagccgggggaccttcggtgggcccggcccggacccggtgcgcaacttcgag
cgctggaagaagaactacgccaagcgcaaggaccggctgcgccagcagcgccaaaagcag
aagcgccccgcttgggaagtggaaaaggaaggcatcgccagactgcagcagagctactcg
cagataaatgcaaatgaggttgtaagattttcggattttccattatctaagaaaacactg
aaaggattgcaggaagctcagtatcgcatggtgactgaaatccagaggcagaccataggt
ttggccttgcaaggtaaagacgtattgggagctgcgaagactggatctggcaaaactttg
gctttcattgtacctgctctggaaatcttataccgtcaacagtggactcccatggatgga
ctgggagttctgatcatatcgcctacccgagagctggcataccaaacgtttgaggttctg
cgtaaggtggggaagaatcacgagttctcggccggccttatcattggtggaaaggacctg
aaacaagaatcggaaagaatccacaatataaacatactgatatgtactccgggacggctc
ttacagcacatggacgaaacatcctatttccatgcctccaatctgcacatgttgatactt
gatgaagctgacagaattctggacatgggttttgctgatacgatgaacgcaatcatagaa
aaccttcccgagatgcgccagactctgcttttctcagccacgcaaaccaaatcggtgaag
gacctggcccggctgagcttgaaagatccagaatatatctgggtacacgagaaggcaaag
ttcagtactccagcaactttggaacagaactacgttgtttgtgaactgcaccagaaaatc
aatatgttgtactcctttttgagaagtcatctgaataagaaaagtattgtattttttgca
agctgtaaagaggtccagtatttgtttagagtcttctgccgtcttcgacccgggctccct
atactggctcttcatggcaagcagcagcagatgaagagaatggaagtctacactgacttt
gtgcgcaagaaatcggcagttctctttgctacggatcttgcggctcggggccttgatttc
cctgctgtgaattgggtcattcagttcgactgtccggaggacgcaaatacttacattcac
agagttggcagaacagccaggtacaaagaaggtggggaagctctccttgtgctgctttct
tcggaggaaaagggaatgatgcagcagctgtcacagaagaaagttcccatcaacaacatc
aaaatcaatcctgaaaagcttatggacattcagaaaaagatgcagtccttcttggctcaa
gatcaagagttgaaagagagagcacaacggtgttttgtttcctatctgcgatcggtctac
ctaatgaagaacaaggaagtgtttgatgtattcaagttgcccattgctgaatatgccctc
tccctcgggcttgcagtggcccctcgtgtacgatttcttcagaagttgcagaagaaaacg
cctgagaatgagcctgaaaaagaaggaccattgcagcaaacagatgagccccaaaatgcc
cccttttctgtaaccaacgatgatgtagagagatgcagagcactcttcagcgaaacggct
gtgttgggcggagatgaggacatagaactctccagcaaagatagtgaaactgaggacgat
gcatcgcaggctcagactgagactgaagaggagcccatagcggtcaagggttcggaagct
gaacgcctgcagttctttgaagagagcaatagtgatgacgatgacactaaggacctcgat
gtgctgacggtgaaacggcggaatgtctttggcttggaaccaggagaaaaaatagcacca
agtacatcagattcaaagccgaagaagaaaataactaaaacaaaagaagctaaaaaagta
ttgaagagaaaatttaaagtaaacacaaaaattgtgtttactgaagatggggagttaatt
cagcagtggccacccgcacaaaaatctgtccacgatgaagcagaagatgacgacgacagt
ggtggaatcagtctcaacaaagcaaaagagaggctgcaggaagaggacaaatttgacaaa
gaagaatataggaagaagattaaagaaaaacacagggaaaaacgactgaaagaaaaggca
gcaagaagagaagccagaaagaaaaattcaaaagtggaagaggaatgtgtcgcctttctg
gatcgcagtgaaagtgatgatgactttgacccaagcatccttccagaccctgacagatat
acagactcggaccaagaggctgatccagaaagccatgatggccctgggatggacaaacaa
cgttctggtggaagcacatcagcggtagaaacagtgccaagaagaaagaagatcaaactc
agcaaagaggactcgtttgcaacattagatacaggcctttcccttgcggaagatgaagca
ctagtattacatctgctcaacaaccaaagctaa
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