Zootoca vivipara (common lizard): 118084718
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Entry
118084718 CDS
T07275
Symbol
PAN3
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118084718 (PAN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zvi03019
]
118084718 (PAN3)
Messenger RNA biogenesis [BR:
zvi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118084718 (PAN3)
mRNA degradation factors
3'-5' decay
Pan complex
118084718 (PAN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
118084718
NCBI-ProteinID:
XP_034970444
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Position
LG5:23215723..23272718
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AA seq
741 aa
AA seq
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MDGGALAEASLTDSYFSTSFIGVNGFGSPAEAKYPMMQRMTNSSSSPSLLNDSAKPYAGH
DSLTSPGSSLFNDFAALSLSQRRKPRKYRLGMLEERIVPVGSKARKSKNTIGCLADRCKT
GVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRLSNMSQSNISAFSQALFSHPSMGG
PANAGLAPGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTSASTPVTNAVSQ
PPAAGQVIQKETVGGTTYFYTDTTPAPVTGMVFPNYHIYPPTAPHVAYMQPKANAPSFFM
ADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLFPLEPLPPPNRIQKTSNFGYITS
CYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKIQHSNIVTLREVFTTKAFGEHSL
VFAYDFHAGGETMMSRHFNDPSADAYFTKRKWGQHDGPLPRQHAGLLPESLIWAYIVQLS
SALRTIHTAGLACRVMDPTKILVTGKTRLRVNCVGVFDVLTFDNSQNNPLALMAQYQQAD
LISLGKVVLSLACNSLAGIQRENLQKAMELVTINYSSDLKNLILYLLTDQNRLRSVNDIM
PMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPTWSETG
DRYLLKLFRDHLFHQVTETGTPWIDLSHIISCLNKLDAGVPEKISLISRDEKSVLVVTYS
DLKRCFENTFQELIAAANGQL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggtgccctggctgaagctagtcttacagactcctacttcagcaccagcttc
atcggagttaatgggtttggaagtcctgctgaagcaaagtatcctatgatgcagaggatg
acaaatagcagcagttcccctagccttcttaatgacagtgccaagccctatgcaggccac
gattctcttacttcacctggttcatccttgttcaacgactttgctgccctcagcttatct
cagaggagaaaaccaaggaagtatcgactggggatgctggaggagagaatagttccggtg
ggatcaaaggcaagaaaatcaaagaacactattggctgcttggctgacaggtgtaaaaca
ggagtacccatcaatatggtttggtggaacagagtcacagaaaacaatttacagacacca
aatcccacggcaagcgagtttattcctaaaggaggatcaacctcccgactcagtaatatg
tcacagtcaaatatatctgccttctctcaagccttgttctctcatccttccatgggaggt
cctgcaaatgctgggctagctccaggaatgtcattgtcagcaggatcttctccccttcat
tcccctaaaattactcctcacacgtctcctgctcctagacgaagaagtcatacaccaaac
ccagcaaattatatggtgcctactagtgcctctacgccagttactaatgctgtctcccag
ccaccagctgctggccaggtgattcagaaggaaactgtgggtggcacaacctatttctat
actgacacaactccagcacctgtaactggaatggtgttcccaaattaccacatttatcct
ccaactgcgcctcatgttgcttacatgcagccaaaagcaaatgcaccttccttcttcatg
gcagatgaactcagacaggagctgatcaacagacacttaattacaatggctcagatagat
caagcagatatgcctgctgtaccaacagaagttgacagctaccacagccttttccctttg
gagccactgccaccacccaatcggatacagaaaacaagcaactttgggtatataacatca
tgctacaaagctgtaaatagcaaagatgatctgccatattgccttcggaggatacatggt
tttcgtcttgttaacacaaagtgcatggtgctggttgacatgtggaaaaaaatccaacac
tcaaacattgtcacattgcgagaagtattcaccactaaagcatttggagaacattctctt
gtgtttgcctatgacttccacgctggaggagagactatgatgagcagacacttcaatgat
cctagtgctgatgcctatttcacaaaaaggaagtggggtcagcatgatggacctttgcct
cggcaacatgcagggttgttgccagaatccctgatttgggcctacattgtacagctcagc
tctgcattgcggaccattcatacagcaggattggcctgtcgggtaatggaccccaccaag
attctggtaactggaaaaacaaggttgcgagtgaattgcgttggagtctttgatgtgtta
acatttgataacagccaaaacaatcccctggccctcatggcccagtatcagcaagcagac
ttgatctcccttgggaaggtggtgttgtctttggcttgcaattctctggcaggaattcag
agggagaatttgcagaaagcaatggaactggtgacaatcaactattcctctgatttgaag
aatcttattttgtatttgctgactgaccaaaacaggcttcgaagtgtaaatgatatcatg
cctatgattggtgcaagattctatactcagttggatgctgcccaaatgagaaatgatgta
atagaagaagaccttgcaaaggaagttcagaatggaagattatttcggcttcttgcaaaa
ttgggaacaatcaatgagaggccagaatttcagaaggacccaacatggtcagaaactgga
gacagatacctcctgaagctgtttagggatcatctttttcatcaggtgacagaaacgggc
actccttggatagacctcagtcacattatctcttgtcttaacaagctagatgctggtgtg
ccagaaaagataagcctcatttccagagatgagaagagtgtacttgtggtgacgtatagt
gacctaaaacgctgctttgaaaacacttttcaagaactgattgcagccgcgaacggccag
ttgtag
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