Zootoca vivipara (common lizard): 118084728
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Entry
118084728 CDS
T07275
Symbol
LSAMP
Name
(RefSeq) limbic system-associated membrane protein
KO
K06772
limbic system-associated membrane protein
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118084728 (LSAMP)
Cell adhesion molecules [BR:
zvi04515
]
Immunoglobulin superfamily
IgLON family
118084728 (LSAMP)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
Ig_5
Izumo-Ig
V-set_CD47
C2-set_2
Ig_PDGFR_d4
Ig_6
Sp38
Motif
Other DBs
NCBI-GeneID:
118084728
NCBI-ProteinID:
XP_034970467
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Position
LG5:28280028..28727057
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AA seq
338 aa
AA seq
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MVGRAQPDRRQFPLVLLRLLCLLPTGLPVRSVDYNRGTDNITVRQGDTAILRCFIEDKSS
KVAWLNRSGIIFAGQDKWSLDPRVELQQLSLLEYSLRIQKVDVYDEGSYTCSVQTLHHPK
TSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPDPVITWRHLTPTGREFEGEEE
FLEILGITREQSGKYECKAANEVSTADVKQVRVTVNYPPTITESKSNESATGRPVSLKCA
ASAVPTPDFEWYRDDTRINNANGLEIRSTGSQSFLTVANVTEEHYGNYTCVATNKLGITN
ASLFLYRPGTGIAGNGSMCLAVPLWLLAASVLCLLSKC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtaggaagggctcagcccgatcggagacaattcccgctggtcctactgagattgctc
tgccttctccccacagggctgccggttcgcagcgtggattataaccgaggcaccgacaac
atcacggtgaggcagggggacacagccatcctcaggtgttttatagaagacaaaagctcc
aaggtggcctggttaaatcgttccggcatcatttttgctggacaagacaagtggtctctg
gacccccgagtagagctccaacaactttctcttctggaatacagcctccggattcagaaa
gtggatgtctatgatgagggatcatacacatgctcagtgcaaacactgcaccaccccaag
acttcacaggtttatttgatcgttcaagttccaccaaagatatccaacatctcatcagat
gtcactgtgaatgaaggcagcaacgtgaccctggtgtgtatggcaaatggacgccctgat
cctgttattacttggagacacctcacccctacaggcagggaatttgaaggcgaggaagag
ttcctggagattctggggattacccgggaacagtcgggcaagtatgagtgcaaagctgca
aacgaggtgtccacagcagatgtcaagcaagtccgagtcactgtgaattaccccccaact
atcacggaatccaagagcaatgaatctgctaccggacgaccagtttcacttaagtgtgca
gcctctgctgttcctacacctgattttgagtggtacagagatgatactaggataaataat
gccaatggtctggagatcaggagcacagggagccaatctttcctaacagtggccaacgtc
actgaagaacattatggcaactacacttgtgtggctaccaacaaactgggaatcacaaat
gctagcctatttctctacagacctggtacagggatagcaggcaatggatcaatgtgtctg
gccgtaccactgtggctgttggcagcttccgtgctctgcctactcagcaaatgttaa
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