Zootoca vivipara (common lizard): 118084881
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Entry
118084881 CDS
T07275
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118084881 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118084881 (TGFBRAP1)
Membrane trafficking [BR:
zvi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118084881 (TGFBRAP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
118084881
NCBI-ProteinID:
XP_034970858
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Position
LG5:complement(73541708..73569341)
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AA seq
884 aa
AA seq
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MKLRHVPLKVTAYIRGHLESAMSVKAFKLVPAVERDLLMGDKARINIECIECCGKNLYIG
TNDCSIYYFLLEEKNSPAEKTSFSVSKQLHKYLSFRKPVGELKAASALNRLLVLCDNTIT
LMNMMNLEPIPTGARIKGATMFTLNENPMSGDPFCVEVCIVSVKRRTIQLFLVYEDRVQI
VKELLTPEQPCAVAIDGHYLCLALTTQYIILNYDTGVSQDLFPYSSEERRPIVKRVGRQE
FLLAGPGGLGMFATVDGISQRAPVHWSENVVGAALCFPYVVALDEEFITVHSMLDQQQKQ
TLPFKDGHILQDFEGRVIVATTKGVYILVPLPLERQIQDLLASHRVEEALVLAKGARRNI
PKEKFQVMYKRLLQQAGFIQFAQLQFLEAKELFRGGQLDVRELISLYPFLLPSSSSFMRT
HPPLHEYADLNQLTQGDQEKMAKCKQFLMSYLNEVRSTDVANGYKEDVDTALLKLYAESG
HESLLDLLVSENFCLLADSAAWLEKHKKFFALGLLYHANGQDAAALQLWVKIVNGDIQDS
TRTDLYEYIVNFLTSCADHELVWKYAEWALQRSEEVGVYIFTRRPLEEEQKNSFNPDDVI
SCLNKYPASLVKYLEFLVLERRVKKEKFHTHLAVLYLDEVLRLKSLAAEKSEELSKSQAK
LRSLLQKSDLYRIRFILDKISGTDLHMECAILFGKLEQHDKALHILVHELKDFAAAEEYC
LWSSESKDLPYRKKLFHMLLLEYLNSSTSEHELAMAAVDLLNNHATEFDASCVLQLIPDT
WSVQLLSSFLCGSMRESIHAQRMTQIALGLAKTENLTYTHEKVKLKGIPTVLSDRKVCQM
CQSPFGEPAFVRYPNGGVVHTHCAANRHVNSSTNHHLSSPSGRT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaggcacgtgcctcttaaagtcactgcttatatcagaggccatctggaaagc
gcgatgagtgtcaaggccttcaagctcgtccctgcggttgagcgggatctgctgatgggc
gacaaagctcggatcaacatcgaatgcatcgagtgctgcgggaagaacctgtacatcgga
accaatgactgttccatctactacttcctgctggaagaaaagaactcgcccgctgagaaa
acgtccttttccgtctccaaacagctgcacaaatacctgagttttcggaagcccgtgggg
gagctgaaagccgcatcggcactcaataggctcctggtgctttgcgacaacaccataaca
ctgatgaacatgatgaacttggagcccatccccacgggggctaggatcaagggagctacg
atgttcacgttgaacgagaaccccatgagcggggatcctttctgcgttgaggtttgtatc
gtttcggtcaagcgcaggaccatccagctcttcttggtctatgaggaccgcgttcagatt
gtgaaggagcttctcacccccgagcagccttgcgccgtggctatagacggccactattta
tgcctcgctctcaccacccagtacattattctgaactacgacactggcgtttcccaggac
ctctttccttactctagcgaagagagacggcccattgtgaaaagagtaggcaggcaagaa
ttcctgttggcgggacctggaggattaggaatgtttgcaactgttgacggcatttcccag
cgtgctcctgttcactggtcagaaaacgtggttggtgccgctctctgctttccttacgta
gttgcactggacgaggagttcattacagtgcatagtatgctggaccagcagcaaaaacag
acactaccctttaaggatggtcatatcctgcaagactttgaaggcagagtaattgtggct
actaccaaaggggtctatatcttggtcccactacctctggaaagacagattcaggatctt
ttggccagccacagagtcgaagaggcattagtcttagcaaagggagcccgcagaaatatt
ccgaaagagaaatttcaggtgatgtacaaacgactcttgcagcaagcgggttttatacag
tttgcacagcttcagttcctagaagcaaaagaactcttcagaggcggccagctggacgtc
cgggagctgatctctctctaccccttcctgctgccttcttcctcttccttcatgcggact
caccctcccctccacgaatatgcggacctgaaccagctgacgcagggggaccaggagaag
atggccaagtgcaagcagttcctgatgagctacctgaacgaagtgcgcagcaccgacgtg
gcgaacggctacaaggaggacgtcgacacggcgctgctcaagctctacgcagagtccggt
cacgaaagccttctagatctgctggtctccgagaatttctgccttctcgcggatagcgcc
gcgtggttggaaaagcacaaaaagttcttcgcccttggactcctgtatcacgcaaacggt
caagatgcagcggcactacagttatgggtgaaaatcgtcaacggtgacatccaggactca
acacgcacagatctttacgagtatatagtcaacttccttacatcctgcgcagaccatgaa
ttggtgtggaagtatgcagaatgggccctgcagcgaagcgaagaggttggtgtgtacatc
ttcactagaagacccttggaagaagaacagaagaatagctttaatccagacgacgtcatc
agctgccttaacaaatatcccgcatcactagtaaaatatctggagttcttggttctggaa
aggagagtgaaaaaggaaaaattccacacccatctggcagtcctttacctggacgaagtc
ctgcgtctcaaatcactggctgcagagaagagtgaagaattgagcaaatcgcaggcaaag
cttcgcagtcttctgcagaaatctgacctttatagaattcgttttattttagataaaatc
agcggcacagatctccacatggagtgtgcaatactctttgggaaactggaacagcacgac
aaagctttgcatatcctggtccacgaactgaaggactttgctgccgcggaggagtactgc
ctgtggagttcggagagcaaggaccttccttacaggaaaaagcttttccacatgctcctt
ttggagtatctcaattccagcacatcagagcacgaactggccatggcggctgtagacctc
ctaaacaaccacgcgaccgaatttgacgcgtcctgcgttttgcagctcatcccggacacc
tggtcggtgcagctcctctcctcgtttctctgcggctccatgcgggaaagcatccatgca
caaagaatgacgcagatcgcactgggcttagcaaaaacggagaacctcacttacacgcat
gagaaggtgaagctaaaagggatcccaacggttctctcggacagaaaggtctgccagatg
tgtcaaagccctttcggcgagcctgcattcgtcaggtacccaaacggcggcgtggtccac
acgcactgcgccgcgaaccgacacgtgaattccagcacaaaccaccatctctccagcccc
agcggacggacatga
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