Zootoca vivipara (common lizard): 118084983
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Entry
118084983 CDS
T07275
Symbol
BRCA2
Name
(RefSeq) breast cancer type 2 susceptibility protein isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03440
Homologous recombination
zvi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118084983 (BRCA2)
03460 Fanconi anemia pathway
118084983 (BRCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zvi04121
]
118084983 (BRCA2)
03036 Chromosome and associated proteins [BR:
zvi03036
]
118084983 (BRCA2)
03400 DNA repair and recombination proteins [BR:
zvi03400
]
118084983 (BRCA2)
Ubiquitin system [BR:
zvi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
118084983 (BRCA2)
Chromosome and associated proteins [BR:
zvi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118084983 (BRCA2)
DNA repair and recombination proteins [BR:
zvi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
118084983 (BRCA2)
FA (Fanconi anemia) pathway
Downstream FA components
118084983 (BRCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
118084983
NCBI-ProteinID:
XP_034971081
LinkDB
All DBs
Position
LG5:24598801..24635685
Genome browser
AA seq
3049 aa
AA seq
DB search
METGLFNNTSDVMDKKNVTTSPKKPSFFEIFKAQHSESDLGPISINWFEELSSEAPLYNS
KRPEEPEPKTSDLDQSNFKTPQRKLPAKNQFASTPMIFSKPNKSVPFVSPIKELGQNKAE
AVLNGSLLHTPKIFEIQTPKCVFESLGAEADPEMTWSSALATPPTLSPTVIIARGNDSVS
GTKQHNERIELVMHSLISKYGRSPKADSMHVQSTSGTEDVCAETDSKIHNFERLLAGSFG
KNISPSKLGEDYMLPNVPMDEDTHDGTENDLSVCLASSKAFLRKPKRVKESKTCSDKAKC
EYQETDEDKIITKYGNSAKCLLQTIPNNGMQKHSVNQNSIPKEEEIPSSLLCSWSQLDLS
ELDMTQLEKTSSHCSDSSPMPHIKKCSEDRQLSVGKECASTEMLESSIQNTSCLIKGNKL
LNTSSLEIIPPLENSPLPDAIMSNKSPMLVKDCEAELASVINVSDSSSFVTENTTFTEAV
NSCCNSSRENCKTTYDLLGSVSTQAAGDVSGLTRSGLKSMTSLSGLKKRPKKFIYTINNT
PVHQEEGTTKRDGSSACLVPTCTDLKSHDSEISATVIRNEEQKEDIIHANKHVLEEKQQI
ESDKKCILSNISNEAPLNYTECNFTDQLSILQQTDNRKGTIMPSSNISANQETESSESMS
HSTGHKINLQRENGGRCISLACFSSLQEGVMEKSTLGIHASKAGNKQAILESATQKFLAS
GTQVAELGSQSKETPKPTIDESFKLIALEKKLDPSQHLRVNLAGNAEDSEQSWLGGISHS
RTEKFGGFRTASNKQIALSDCNIRKGKLLFKDIEDKFIEDFPSKGMQNISNENAQRSAEI
SSLGMNKLTENSSNFSHVSDLLGIQMNGAQIIFPKCANSAFQNVLSNQHPEGELNLTASQ
EAEVTEISNILEETGSQFEFTQFKKHKTMVFNNADEMSGSFDKNDICAEVWKETDFEKSS
EEKVQSGHDLSPNKHIGTAEKSKIQVQSSEEATSINSRTKQNNIFVPIVSAPSQFNLSDL
GSCSASGGKEISFYVDAIKKATKLVGDLDGVNEMLSPHQKILLRDCSNRCNNSWSNPNCM
KEREIDWHQSVKEVNAEYLMKKNAKDTIKFVKENIESKSKIVNYNEGNVQISSTTEVNLK
IIKKYSVCMTGNELSSFENNQSVLVSHHFVNCEETQCNYNLQEALSDLTCLAEVAKTEKR
STLNNAYGKENSNLNQEEKVSNLESGCFLQRFHTVADGNIFAGKSKKLHLLAASCAREEL
ETMSTSSGKTSPKSKKGGVSSVKENINLSETERSNHQEISEIRKEKQIVAMGFHTASGKQ
ITITNESLAKAKHLLSEDETVFPEMEEEVSNFIKPIIKEKRNEKITKVSKEFEEGNEKHE
YLHPEGNFEDLPDLSSNTIKKTEDLDTIKELSLEMNASESDLVSHTRGEKVNEGLLTKNN
LACTKYKNISKMEFIDSAIDQHLPVEGSDISAMQGFQDLSSRNTGNYKSLDSSNLMCSTT
SKASTSDLKSEHSLLNHIPDECHKKNYVSENLTFISQEASPSKNVFAENNVHTYDETCKN
ENSMMQKCDLRLFSTNVLQKYSASETSTSTSKHLQAKPVAFNTASGKAVGVSQEALKKVR
QVLHEDCYKSVKENMESQSKTNKHDHLESCSDTCGTGVCIDSNNYSSAENIPVENIIAPQ
FSRAKECCADEHTSMTLNTHPELCFQINDKHSDTWTSKKQKCIKSDFITDKSGFFSTASG
KPVQLSEESLKKAKLLFSEMENNSSDHPSHVSNCDYSYDEVSSTGSKEAPKKDTILVSQG
KRLSNTQANANIPCGFATASGKQVQISQKALQKVMGLLKEFDDVNSDSFSDAQQSVGQGP
IKVLATEAIEQDEVISESKPRKKYKALHSATSTPNENKMIKSPLSIKIPVCTSHTKKQKQ
IAELEESFTCSKEIEALKITQPCQSKSETKCAANCGTATERNLDSHCRHYSQTPENYLEI
EATESAKAFMEDDELEVQKNKNFLSYTRTGKRHMKEENTFGEPPIKRKLLPEFERSEERN
KASLKPSKSYPEGIVNDRKKFTYNIPLKPVVCGPLSKTLTEERKKAENTAKKPAKIFAPP
FKTKANASEDKLGNSKESVLMDNKSINRMEELRLTKVNQSTTETEGNIFEDNNSMQISAL
NSESRDTNSDLTKIANLQYARNLQEIRIIKKQSQRICPQPGSLYLVKISAPCKVPLKAAV
GEKLPGSFTSDQLYAFGISKQCLKISSRNAEDFQFIIQDFFSRDYFLEERGIQLADGGYL
IPNDEGKAGKEEFYRALCDTPGVDPKLISKAWVYNHYKWIVWKLAAMEVAFPREFANKCL
TPERLLLQLKYRYDVEVDQSHRSAIKRIMERDDVASKTLILCMTKIISLNTNMSQICGDK
STAEDSKKDIAVVEVTDGWYGIKALMDPPLQSLLCRKRLTVGQKIVVHGAELVGSQEAST
PLEAPESLMLKISANSTRRARWYAKLGYHRDPRPFSLSLSSLLFDGGTVGCIDVIVQRLY
PIQWMEKTAGSYVFRNCRAEEREAAKHAENRQKTLEALLAKIQAEFEKNEDGGKRVLRSR
TLTRQQIRSLQDGAELYEAVLNAADPAYLESYFSEEQLKALNSHRQMVNDKRQAQIEAEF
RKAVDSAEEENSSCRRDVTAVIKLRIVDYKREERGKEVVLSIWRPSSDICTLLREGARYR
IFQLSASQSKGKLESANIQLTATKKTQYLQLPVSQETLSQVYRPRECLRFSKLLEPYFHP
TCSEVDLVGYIISLRKGMGFSTLVYLSDENHHFIAVQIYTDLKQLAIDDIIIPSMLISAI
NLQWRPEFRSDIPTLFAGDLSAFSSNPKESHLQGCFNELRNTVENSSCFGKDAQCKLMNL
LQTDDPQTFNLPKECGLDPISQNSGAGNKHSIATPGSGLWHQSPLSLGKLDSKPPVFLGS
AKTAELEETPKNCKKRRAMDLLSRVPSPPPVKTNCIFISPSLKRAFQPPRSSSTQLEKSL
KRTACYNKKSALRGFSETGSPLENNFVADEELAMINTQALVSSFPEDTG
NT seq
9150 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggtttatttaacaacaccagtgatgttatggataagaaaaatgttaccaca
tctccaaagaagccatctttctttgaaatattcaaagcgcaacacagtgaatcagattta
ggaccaataagtatcaactggtttgaagaactcagttcagaagctccactgtataactca
aaaagaccagaagaacctgaacctaaaactagtgacctggaccaaagtaattttaaaaca
ccacagaggaagctgccagcaaaaaaccaatttgcatcaactccaatgatatttagcaaa
ccaaataaatctgtgccatttgtttctcctataaaagaattgggtcagaacaaagcagaa
gcagtgctaaatggaagtttgctgcatacacccaagatttttgagattcagacaccaaaa
tgtgtttttgaaagcttaggagcagaagctgatcctgagatgacttggtcaagtgcatta
gcaacacctcctacactttctccaacagtcataatagctagaggaaatgattcagtttct
ggaacaaagcagcataatgaaagaattgagttggtcatgcatagtctcatctccaaatac
ggtagaagtcccaaggcagatagtatgcatgtgcagtccacatcaggaacagaagatgta
tgtgcagaaactgacagcaaaatccacaattttgaaaggttattagctggatcctttggt
aagaacatttcccccagtaaattaggagaagattatatgctaccaaatgtaccaatggat
gaagatacgcatgatggaacagaaaatgatctttctgtatgccttgcaagcagcaaagcc
tttctaagaaaaccaaaaagagtcaaggaaagtaagacatgctctgataaagcaaaatgt
gaataccaagaaactgatgaagacaaaattataacaaaatatggaaattctgccaaatgt
ctcctgcagactattccaaataatggaatgcagaagcactctgtgaatcagaatagcata
ccgaaagaagaggaaataccatcatctttgctttgctcatggtctcagctggacttatct
gaacttgacatgacacagcttgaaaaaacgtcctcacactgttctgattcatctcctatg
ccacatatcaagaagtgttctgaagataggcaactatctgttggcaaagagtgtgctagc
actgaaatgctagaatcgtctattcaaaacacatcatgcctaataaaaggtaacaagctg
ctaaacaccagttctctggaaataataccaccgcttgaaaactctccattgcctgatgcg
attatgagcaataagagcccaatgttggtgaaagattgtgaggctgagttggcatctgtc
ataaatgtttcagacagtagctccttcgtaacggaaaacacaacttttacagaagctgtt
aatagttgctgtaattcctcacgagagaattgtaaaacaacctatgatcttctaggtagt
gtttctacccaagctgctggtgatgttagtggacttacaaggtctgggttgaaaagtatg
acctcactttctggtttgaaaaagcgacctaaaaaatttatttatacaataaacaatacc
ccagttcaccaagaagaaggaaccacaaagagagatggctcttctgcttgccttgtgcca
acttgtacagatttaaaatctcacgactctgaaatttctgcaacagtcataagaaatgaa
gaacaaaaagaagacattatccacgcgaacaagcacgtacttgaagagaaacagcaaata
gagtctgataaaaaatgcattcttagtaacatttccaatgaagcaccactcaattacaca
gaatgtaattttacagatcagttgtcaatacttcaacagacagacaacagaaaaggaaca
attatgccttctagtaatatatctgctaatcaagaaacagagtcaagtgaaagcatgtcc
cattcaactggtcacaagataaatttacaaagagagaatggtggaaggtgtatcagtctt
gcatgtttcagttcattgcaagaaggggtaatggagaaatctacattgggaatacatgca
tcaaaagctggaaacaaacaagcaatcttggaatcagctacacaaaagtttttggcaagt
ggcactcaggtggctgaacttgggtctcaatcaaaggaaacaccaaaacctactatagat
gaatcttttaagcttatagcattggagaaaaagttagatccaagccagcatctacgagta
aacttagcaggaaatgctgaagatagtgagcagagctggttaggaggtataagtcatagc
agaactgaaaagtttggtggcttcagaacagcatccaataaacagatagcactgtctgat
tgcaacattagaaaaggcaagttattgttcaaagacatagaagataaatttattgaagat
tttcctagcaaaggaatgcaaaatatttcaaatgaaaatgcacagagaagtgctgagata
tcttcacttggtatgaacaaactgacagaaaattcatctaatttttcacacgtttctgat
ctgctcggtattcagatgaatggtgcccaaattattttccccaagtgtgccaattctgct
ttccagaatgtgcttagtaatcaacatcctgaaggagaactaaatttaacagcaagccaa
gaagctgaagttactgaaatttctaatatactagaagaaacaggtagtcaatttgaattt
acacagttcaaaaagcataagacgatggtgttcaataatgctgatgagatgtctggaagc
tttgataaaaatgatatatgtgctgaagtctggaaagaaactgattttgagaaaagctct
gaagaaaaggttcaaagcggccatgatctgtctcccaataaacatataggcacagctgag
aaatctaagatacaggtacaaagtagtgaagaagctacatccattaattcaagaacaaaa
cagaacaatatttttgtcccaattgtttcagcaccatcacaattcaatttgtctgatctg
gggagctgtagtgcatctgggggcaaagagattagcttttatgttgatgctataaagaaa
gccacaaaattagtcggcgatctggatggagtgaatgaaatgcttagccctcaccaaaaa
atattgctacgcgattgttcaaataggtgcaacaatagctggagtaatcccaactgcatg
aaagagagagagattgattggcatcagagcgtcaaagaagtaaatgctgaatatttgatg
aaaaagaatgcaaaagatacaattaaatttgttaaagaaaatatagaaagcaagtcaaaa
attgtaaattataatgaaggcaatgttcagatttctagcactacagaagttaacctaaaa
attattaaaaaatactctgtctgtatgacaggaaatgaactgtcttcctttgaaaataat
caaagtgtattagtctcacatcactttgtaaactgtgaagaaactcagtgtaattataat
ttgcaagaagctttgtcggatctaacatgtttagctgaagttgctaaaactgaaaaaaga
tccaccttgaataatgcatatggaaaagaaaactctaatttaaatcaggaggaaaaggtg
agcaatctagaaagtggttgttttctacagagatttcacactgttgcggatgggaacata
tttgcagggaaaagtaaaaagcttcatttgttggctgcctcctgtgcaagagaagaacta
gagacgatgtcaacttccagtgggaagacaagccctaaaagcaaaaagggaggtgtcagt
tctgtaaaagagaatattaacttaagtgaaactgaaaggtccaaccatcaagaaatctct
gaaatcagaaaagagaagcagattgttgcaatgggttttcatacggctagtggtaagcaa
attacaattactaatgaatcattagctaaagcaaagcatcttctttcagaagatgaaact
gtttttccagaaatggaggaagaggttagtaattttatcaagcctataattaaggagaaa
agaaatgagaaaattaccaaagttagcaaggaatttgaagaaggaaatgaaaaacatgaa
tatctgcatcctgaaggtaactttgaagatcttccggatttgtcctcaaacactattaag
aagactgaggatcttgacactattaaagaactttctttggagatgaatgcatctgaatca
gatttagtatctcatactagaggggagaaagtgaatgaaggcttgttgacgaagaataat
ctggcatgtacaaaatacaaaaatatttcaaaaatggaatttattgattctgctattgat
cagcatttgcctgttgaagggtcagatattagtgcaatgcaaggttttcaggacttgtca
tctagaaatactggcaattataaaagccttgattcctcaaacttaatgtgcagtaccacc
tcaaaagctagtacctctgatttaaagagtgagcattctttgttgaaccatataccagat
gaatgtcataagaaaaattatgtgtcagagaatttaacttttatttctcaagaagcatca
ccatcaaaaaatgtgtttgctgaaaataatgttcacacttatgatgaaacttgtaaaaat
gagaatagcatgatgcagaaatgtgacttaagattgttcagtaccaacgtcttgcagaaa
tattcagccagtgaaacttcaacttcaacgtcaaagcatttgcaggctaagccagttgcg
ttcaatacagcaagtggtaaagctgttggagtttctcaggaagcattaaaaaaagtcaga
caagtgcttcatgaagactgctataaatctgtaaaagagaacatggaatctcaatctaaa
acaaataaacatgaccatttagaaagctgttctgatacctgtggcactggagtgtgtatt
gattctaataactactcatctgcagagaacattccagtggaaaatataattgcaccccag
ttttctcgagccaaagagtgctgtgcagatgagcacacatctatgaccttgaacactcac
cctgagttatgctttcaaattaatgataagcattctgatacatggacttccaaaaaacag
aagtgtatcaagtcagattttattactgataagtctgggttttttagcacagctagtgga
aaacctgtccagttatctgaagagtcattaaagaaagcaaagctgcttttttctgaaatg
gaaaataattcatcagatcacccgagtcatgtctctaactgtgattatagttatgatgaa
gtatcttccactgggagcaaagaagctccaaagaaagacacaatacttgtatctcaaggg
aaaagactttcaaacactcaagcaaatgcaaatattccctgtggcttcgccacagcaagt
ggaaaacaagtacaaatttctcaaaaggctctccagaaagttatgggtctcttaaaagaa
tttgatgatgttaatagtgatagcttttctgatgctcaacagagtgtggggcaaggtcct
ataaaagttcttgctacagaggccatagagcaggatgaagttatttcagagtctaaacca
cgtaagaaatataaagcacttcattcagccacaagtacacctaatgaaaataagatgata
aaaagcccattgagcattaaaatacctgtgtgcacatctcatactaagaagcaaaaacaa
atagcagagttagaagaaagctttacatgttcaaaagaaattgaggctttgaagataacc
caaccatgccagagtaaaagcgaaactaaatgtgcagcaaattgtggtactgcaacagaa
agaaatctggattctcattgtcgtcattactcacaaactccagaaaattacttggaaata
gaagctacagaaagtgccaaagctttcatggaagatgatgaacttgaagtacagaaaaat
aaaaattttctgtcatatacaagaactggaaaaaggcacatgaaagaagaaaacactttt
ggggaacctcctattaaaagaaaattgctgcctgagtttgagcggtcagaagaacgcaac
aaagcatctttgaaaccttcaaaaagttatccggagggtatagtgaatgacagaaaaaag
ttcacctacaatattcctttaaagccagtggtctgtggccctttaagtaagacgttaact
gaggaaaggaagaaagcagaaaatacagcaaagaaacctgccaaaatctttgcaccacct
tttaaaacaaaagcaaatgcttctgaggataaactaggtaacagcaaagaatctgtctta
atggacaacaaaagtattaatagaatggaagagcttcgtcttacaaaagttaaccagagc
actactgaaacagaaggcaatatctttgaagataataattccatgcaaatatcggctctg
aattcagaatccagagatacaaattcagatttaacaaaaatagcaaatcttcaatatgca
agaaatttacaagaaatcagaattataaagaaacaaagccagagaatttgtccacaaccg
ggcagcctgtaccttgtgaaaatatctgctccttgcaaagttcctctgaaagcagcagta
ggagagaaattgcctggttctttcaccagcgaccagttgtatgcatttggtatttccaag
cagtgcctaaaaataagcagcagaaatgcagaagattttcaatttatcatccaggatttt
ttcagtagagattattttttagaagaacgtggaatacaactggcagatggtggatatctt
attccaaatgatgagggaaaggcaggaaaagaagaattctacagggctttgtgtgataca
cctggtgtggatcctaagctaatttcaaaagcttgggtctacaatcattataagtggatt
gtgtggaaactagcagctatggaagttgcatttccacgggaattcgccaataaatgtttg
actccggaaagactactacttcagctaaagtacaggtatgacgtggaagttgaccaaagt
catcgctcagccatcaaaaggataatggaaagagatgatgttgcttctaaaactctcata
ctgtgcatgactaaaataatatcattgaacacaaatatgtctcagatctgtggtgataaa
agcactgctgaggacagcaaaaaagacatagcagtggttgaagttacagatggctggtat
ggaatcaaggctctcatggaccctcccctccaatcactattgtgtagaaagaggctgact
gtgggccaaaagattgttgtacatggagcagaacttgtgggttctcaggaggcaagcacg
ccactggaagcgccagaatctcttatgctgaagatttcagctaacagcactcgacgtgcg
cgctggtatgccaaattaggataccatcgggatccccggccattttctttgtctttgtca
tcactcctttttgatggtggaactgttggttgcattgatgtcattgttcaaagactttat
cccatacagtggatggaaaaaacagcaggttcctatgtgtttcgtaactgtcgagctgaa
gaaagagaagctgcaaagcatgctgagaatcgacaaaaaaccctggaagcattgcttgca
aaaatacaagctgaatttgaaaagaatgaagatggcggcaaaagagtactgcgatcccgc
acgttaaccagacaacagattcgctctctgcaagatggggcagaactttacgaggcagtt
cttaatgctgctgatccagcttacctggaaagttatttcagtgaggagcagttaaaggcc
ttgaacagtcacagacagatggtaaatgataaaaggcaagcacagatagaagccgaattc
aggaaggcggtggattctgctgaggaggaaaacagttcctgcagaagggatgtaactgcc
gtaatcaagctacgaattgtggattataaaagagaagaaagaggaaaagaagtagtactg
agtatctggcgcccatcatcagacatttgtaccctcctaagggaaggagctcggtataga
attttccaattatctgcatcccaatccaaagggaagttggagtctgccaatatacagtta
acagctaccaagaaaactcagtatctgcagttgccagtgtctcaagaaacactgtcacaa
gtttacaggccaagagagtgcctgagattcagcaagctgttggaaccatatttccatcct
acctgttctgaagtggatttggtgggatatataatttctctaagaaaaggaatgggtttc
tctacgctggtatatctgtcagatgagaatcatcatttcatagcagtccagatctataca
gatcttaagcagcttgctattgatgacataattattccttctatgttgatctctgcaatc
aaccttcagtggcgacctgaatttagatcagacattcccacattatttgctggagacctt
tctgccttctcctcaaatccaaaagaaagtcatctccaaggatgttttaatgaactgaga
aatactgtagagaatagcagctgctttggcaaagatgcacaatgcaaactgatgaatttg
ctacaaacagatgacccacaaacatttaacttgcccaaagaatgtggcttggatcccatt
tctcagaattctggtgcaggaaataaacattccattgcaactcctggcagtggactatgg
catcagagtcctttgtcacttgggaagctagattcaaagccaccggtatttctagggtca
gcaaaaacagcggaactagaagaaacccctaagaactgtaagaaaagaagagcaatggac
ctgcttagtcgagtaccttccccaccaccagtgaagaccaactgtatatttatttctcca
tctctgaaaagggcatttcagcccccccgaagttccagcactcaacttgaaaagtcactg
aaaagaactgcatgttataataaaaaatctgccctgagagggtttagtgagactggttct
cctcttgaaaataattttgttgctgacgaggagcttgcaatgataaatacacaagccctc
gtaagtagttttccagaagatacaggttga
DBGET
integrated database retrieval system
