Zootoca vivipara (common lizard): 118085070
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Entry
118085070 CDS
T07275
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zvi04040
]
118085070
Ion channels [BR:
zvi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
118085070
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Motif
Other DBs
NCBI-GeneID:
118085070
NCBI-ProteinID:
XP_034971248
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Position
LG5:complement(2444319..2472303)
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AA seq
907 aa
AA seq
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MALEFDGITQPNWKEIVNKKLKFPEGLLNAIQDGQLMKVQQLLQVSDGILKQLDEAEDRA
WREALNLAIRTGGEDITKTLLRVVKFDFRQIHEALLVAVDTNQPTVVKLLLDRLDQEKGR
KMDIKSFSSALFDNSIDNSRFAPGVTPLTLACEKDLYEIVDMLMKKGHAIPGPHKVSCSC
LECSNGRKFDLLKFSLSRINTYKGIASRAHLSIASEDAMLTAFKLSRELKRLSKKEPEFK
PEYLALEQLCQEFAFELLGMCRNQSEVTAVLNDVADSSNDEEEEDLDDQAFEEGIPNLAR
LRLAVNYNQKRFVAHPICQQVLSSIWCGSLQSWRGSTSLWKVFVSCSIFMGMPFLCLIYY
VAPKSKFGKMLKIPVIKFLLHSASYVWFLVFLLAESLVLEYNNETFSGRNQNMWETSLHM
IWVAGFFWFECKEVWIEGFRSYLLDWWNFLDIVMLSMYLASFVLRLLIFFQGRVFCLDNK
ESAECRYYTEAERREWHTEDPQFIAEVLFAVTSMLSFTRLASILPAHETLGTLQISIGKM
IDDMIRFMFIMMIILTAFLCGMNNIYVHYQESEKLGSFNETFQFLFWTMLGMEEHDVVDM
PQFLMAQLVGRVLYGVFTIVMVVVLLNMLIAMITNCFQKIEVSAAAGDDADVEWKFARSK
LYLSFFREGLTLPVPFNIIPSPKSIFYVVRGLFRFLCCYKPKRQQKYPPITTISNPCMEE
GGQRTESRAAYRRQVLKALVQRYIDTARREFEESRRKDLGNRLTELNKSVVRLLSDMKQL
RHTVADNGMADNPLNGTSVLHKYIMKVRSSFQSYDNEAGGSKQGPATDAALPQDGVVAEE
DATPLPQEPSEGQQAEAEEGPPQGEAEERQPGVEAEERPLEVEAEERPPQVEVEVAIEEN
PVGEPET
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggcactggagtttgatggcatcacgcaacccaattggaaagaaattgtgaacaagaag
ttgaagttcccggaaggcctcctcaacgccatccaagatgggcaactgatgaaggtccag
cagctgctgcaggtgagtgacgggatcctgaagcagctggatgaggccgaggaccgggcg
tggcgagaggctctcaacctggccatccgcacgggcggcgaggacatcaccaagacgctg
ctgcgcgttgtcaagtttgacttccggcagatccacgaggccttgctggttgctgtggat
accaaccagcccactgtggtcaagctgctgctggaccgcctggaccaggagaaaggccgc
aagatggacatcaagtccttctcctcggccttgtttgacaactccatcgacaactcgcgc
tttgccccgggcgtgacacccctcaccttggcttgcgagaaggacctctacgaaatcgtg
gacatgctcatgaagaagggccacgccatcccggggccgcacaaggtctcatgctcctgc
ctggagtgctccaacggccgcaagttcgacctgctcaagttttcgctttctcgcatcaac
acttacaagggcatcgccagccgggcacacctctccatcgccagcgaagacgccatgttg
acggccttcaagctcagccgagagctcaagcgcctctccaagaaggagcccgaattcaag
cctgagtacctggccctggagcagctgtgccaggagtttgcctttgagctgctgggaatg
tgccgcaaccaaagcgaggtgacggccgtcttgaatgacgttgcggattcctcgaatgac
gaagaagaggaggacctcgatgaccaggccttcgaggaggggatccccaacttggcgagg
cttcgcctggctgtcaactacaaccagaagcggtttgtcgcccaccccatctgccagcaa
gtgctgtcgtccatctggtgcgggagcctgcagagctggcggggcagcacctcgctctgg
aaggtcttcgtctcctgttccatcttcatggggatgcctttcctgtgcctcatctactac
gtggcccccaaatccaagtttggcaaaatgttgaagatccccgtgatcaagttccttctg
cattcggcctcgtatgtctggttcctggtcttccttctggcagagtcgctggtgctggag
tacaacaacgagaccttttcggggcggaaccagaacatgtgggagacgtcgctgcacatg
atatgggtggcaggtttcttctggtttgagtgcaaagaggtttggatcgagggcttccgc
agctacctcttggactggtggaacttcctggacatcgtcatgctcagcatgtacctggcc
tcctttgtcctcaggctcctgatcttcttccagggccgtgttttctgtctggataacaaa
gagtctgcagagtgccgttactacacggaagcggaacgtcgggagtggcacaccgaagac
ccccagttcatcgccgaggtgctgtttgccgtgactagcatgctgagtttcacccgcctg
gcttccatcttgcccgcccacgaaaccttggggaccctgcagatctccattggcaagatg
atcgacgacatgatcaggttcatgttcatcatgatgatcatcctgaccgcgttcttgtgt
gggatgaacaacatctacgtccactatcaagagtctgagaagctggggagcttcaacgag
acgttccagttcctcttctggaccatgcttgggatggaagaacacgatgtggtggacatg
ccccagttcctcatggctcagctggtggggagggtgctgtatggggtcttcaccatcgtc
atggtggtcgtcctcctcaacatgctcattgccatgatcaccaactgcttccagaaaatt
gaggtgagtgctgccgccggggacgatgccgacgtggagtggaagtttgcccgctccaag
ctctacttgtctttcttcagggaaggcttgacactgccagtgcccttcaacatcatcccg
tcaccaaagtccatcttctatgtcgtcaggggcctcttccgcttcctgtgctgttacaaa
ccaaagcgccagcagaaatacccccccatcacaaccatttctaacccctgcatggaggag
ggcggccagcgtacggagagccgtgctgcctaccggcgccaagtgctcaaggctctggtg
cagcgctacatcgacacggcccggcgggagtttgaggagagccgcaggaaagatctgggg
aaccgcctgacggagctgaacaagtctgtggtgcgcctcctctccgacatgaagcagctg
cgccacaccgtggccgacaacggcatggcggacaaccccttgaacgggaccagtgtcctg
cacaagtacatcatgaaggtgcgcagcagcttccagagctacgataatgaggcaggcggc
tctaagcaggggcccgccacggacgccgccttgccccaggatggggtcgttgccgaagag
gacgcaacaccgttgcctcaggaaccctctgagggacaacaggcggaagctgaggaaggg
ccgccccagggggaagctgaggagagacagcctggggtggaggctgaggagaggccgctg
gaggtggaagctgaggagaggccaccccaggtggaagtagaggtggcaatcgaagagaac
cctgtaggagaaccagagacgtga
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