Zootoca vivipara (common lizard): 118085457
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Entry
118085457 CDS
T07275
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118085457 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118085457 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zvi04515
]
118085457 (PCDH20)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118085457 (PCDH20)
Cell adhesion molecules [BR:
zvi04515
]
Cadherins
Protocadherins
118085457 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
118085457
NCBI-ProteinID:
XP_034972018
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All DBs
Position
LG5:complement(97602667..97609447)
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AA seq
961 aa
AA seq
DB search
MSSRGNETRRSSPPALGSSWLPGKRHRPLAMGQRSSPGSSTSASQRNLPNLFIFLLFLGP
FNCFASYSRATELFYSINEGLPSGFLIGNLAQDLQVQATSEGEGEGEGEATVEGKQQPQQ
WGKTPLSFSLASQGLGGQYVNLDNQTGELRTSAKEIDREALCTEDNVGSSVVASSSSSPV
PSSESCLLLLDVMVLPQEYFRLVKVKIAIHDINDNAPCFPMPEIHLFVPENSPVNTRLAI
EHPAVDPDMGSNGVQTYHLQDDFGVFTLDVEENESGERTPYLIVMGALDREARDKYITLI
TAEDGGAPPLVGSATLTIGISDINDNCPQFNETQINVTVFGNSSIGLPIASVHAVDVDQG
INAEITYSYSQKVSPSSRTLFHLDESTGVIKLSKRINGDTPHLHRLSVLANGPGCIPAVV
TVLISIIKVTMRPPEVIPRFIANEVEGVVYLRELEPVNTPIAFFTIKDPDEKYKVDCYLD
GDGPFRLSPYKPYHNEYLLETTKPLDYEAQQFYEVSVIAWNTEGFHVNKIVKVQVLDDND
NSPVFSQTLIELSIEENNSPNAFLTKLHATDADSGERGQVSYFLGPEAPSYFALDKVTGV
LTVSTQLDREEREKYRYTVKAVDSGVPARESMATVTISVLDKNDNSPRFINKDFSFFVPE
NFPGFGEIGVISVTDADIGQNGWVALSVVNGSDIFVIDTGKGVLRAKVSLDREQQSSYIL
WVEAVDGGDPALSSTAKITVLLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAV
DNDTGMNAVIAYSIIGRRGPRPDSFKIDPKTGNITLEEALLQNDYGLYRLLVKVSDHGYP
EPLHSTVMVNLFVNDTVSNESYIESLLRKEPDVNVEEKEPQISIEPTHKRVESASCMPTL
VVLSVISLCSITLVTGMGIYICLRRGRKYHRGDETLEVQIPLNGRIDLHMLEKKPMEISN
I
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgagggaatgagacccggcgcagctcgccaccggccctaggatccagctgg
ctcccggggaagaggcaccggccgctggctatggggcagcgatccagccctgggagcagc
acaagcgccagtcagaggaacctgccgaacttgttcattttcctgctcttccttggacct
ttcaactgctttgcaagctatagccgtgccactgaacttttctacagcatcaatgaaggg
ctgccctccgggttcctgatcgggaatctagcccaggatttacaggtccaggcaacatca
gagggagagggagagggagagggagaggccacagtagagggaaagcagcagcctcagcaa
tgggggaaaacccctctctccttcagccttgcctcccagggattaggaggtcagtatgtg
aacctagacaaccagacaggagaactgcgcacctccgcaaaggagattgaccgagaggcg
ctatgcacagaggataatgttggctctagtgtggttgcttcctcctcctcctccccagta
ccatcttctgagtcgtgcttgctgttgctggatgttatggtgttgcctcaggagtatttc
cgccttgtcaaggtgaagattgccatccacgacatcaatgacaatgccccgtgctttccc
atgccagagatccacctctttgtgcctgagaactcaccagtcaacacccgtttagctata
gagcatccggcagttgacccagacatgggcagtaacggagtccagacataccacctacaa
gatgactttggggttttcacactggatgtggaggaaaatgaaagtggagaaagaacgcct
tacctgattgtcatgggtgccttggacagagaggccagagacaaatatattaccctcata
actgcagaggatggaggagcccctccactggtgggcagtgccaccctcactattggcatc
agcgacatcaacgacaactgcccacagttcaatgagacccagatcaatgtcaccgttttt
gggaattctagtattgggttgcccatagcctctgtccatgcagtggatgtggatcaggga
atcaatgcagagatcacatattcctacagccagaaggtttctccgtcatcccgcactttg
ttccaccttgatgaaagcacaggtgttatcaagctctccaagaggattaatggtgacacg
cctcatctccatcggctgagcgtattagccaacggtcctggctgtatccctgcagtggtc
actgtcttaatatccatcatcaaagtcacaatgagacctcctgaagtgattcctcgtttt
atagctaatgaagtagaaggggtggtttacctgagggaattagagcctgttaacacaccg
atagcattttttaccataaaagatccggacgaaaaatacaaagtggattgctatttggat
ggtgacggcccattcaggttgtcgccgtacaaaccatatcacaatgagtacttgctggag
actacaaaaccattggattatgaggctcaacagttctatgaagtatcagtgatcgcatgg
aatactgaaggattccatgtcaataaaatagtgaaagtacaggttctggatgacaatgac
aattcacctgttttttctcaaacactgatagaattatcaattgaagaaaataattccccc
aatgcttttttgaccaagctccatgcaacagatgctgacagtggagaacgagggcaagtg
tcttatttcctagggcctgaagccccttcctattttgctttagataaagtcacaggagtt
ttgacagtttccacccagctggacagagaagaaagggaaaaataccgctacacagttaaa
gcagtagattctggagtaccagcccgagaatcaatggccacagttaccatctctgtactg
gataaaaatgacaacagtccaagatttatcaacaaggattttagtttttttgtgccagag
aattttccaggctttggggaaattggagttataagtgtcactgatgcagatatagggcaa
aatggctgggtagcactttctgttgtaaatggaagtgacatctttgttatagacactggc
aaaggagtgctaagagctaaggtctctctagacagggaacagcaaagctcatacatctta
tgggttgaagcagtcgatggaggtgatcctgccttgtcctctactgcaaaaataactgtc
cttttgctggacataaatgataacccacccttggtcttgtttccacagtccaatatgtct
tacctccttgtccttccttctactctacctggatctcctatcacagaagtttatgctgta
gataatgataccggcatgaatgcagtcatagcatacagcatcatagggagaagaggtccc
cgaccagactcctttaagattgaccccaagacaggcaatatcaccctggaagaggcactc
ttgcaaaacgactatggcctttatcggcttcttgttaaggttagtgatcatggttaccca
gaacctctgcattccacagttatggtgaacctctttgtcaatgacacggtgagtaatgag
agctacattgaaagccttttaagaaaggaacctgatgttaatgtcgaggaaaaagaacca
caaatctctatagaacccacacacaaaagagtagaatcagcatcttgtatgcctacctta
gtggtcctgtcagtaataagcttgtgttcaataacattggtaactggaatgggtatttac
atctgcctaaggagaggaagaaagtaccacagaggagacgaaactttggaagtacaaatc
ccattaaatggaagaattgatcttcatatgctggagaaaaagcctatggaaatttccaat
atctga
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integrated database retrieval system
